RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 ASXL1Q8IXJ9 1541 aa10□□□□□ -0.81
CDC42SE2-201ENST00000360515 MYOM3Q5VTT5 1437 aa10□□□□□ -0.81
CDC42SE2-201ENST00000360515 WASHC2CQ9Y4E1 1318 aa9.99□□□□□ -0.81
CDC42SE2-201ENST00000360515 LTKP29376 864 aa9.99□□□□□ -0.81
CDC42SE2-201ENST00000360515 PIP4K2BP78356 416 aa9.99□□□□□ -0.81
CDC42SE2-201ENST00000360515 ZNF772Q68DY9 489 aaPredicted RBP9.98□□□□□ -0.81
CDC42SE2-201ENST00000360515 NALCNQ8IZF0 1738 aa9.98□□□□□ -0.81
CDC42SE2-201ENST00000360515 GGT6Q6P531 493 aa9.98□□□□□ -0.81
CDC42SE2-201ENST00000360515 ADAMTS13Q76LX8 1427 aa9.98□□□□□ -0.81
CDC42SE2-201ENST00000360515 E9PCH4 1651 aa9.97□□□□□ -0.81
CDC42SE2-201ENST00000360515 RGS12O14924 1447 aa9.96□□□□□ -0.81
CDC42SE2-201ENST00000360515 PTCH1Q13635 1447 aa9.96□□□□□ -0.82
CDC42SE2-201ENST00000360515 KIF3BO15066 747 aa9.95□□□□□ -0.82
CDC42SE2-201ENST00000360515 NWD2Q9ULI1 1742 aa9.95□□□□□ -0.82
CDC42SE2-201ENST00000360515 MSH6P52701 1360 aa9.95□□□□□ -0.82
CDC42SE2-201ENST00000360515 ZNF644Q9H582 1327 aaPredicted RBP9.94□□□□□ -0.82
CDC42SE2-201ENST00000360515 ABCC5O15440 1437 aa9.93□□□□□ -0.82
CDC42SE2-201ENST00000360515 ATRNO75882 1429 aa9.93□□□□□ -0.82
CDC42SE2-201ENST00000360515 KNDC1Q76NI1 1749 aa9.93□□□□□ -0.82
CDC42SE2-201ENST00000360515 TBX22Q9Y458 520 aa9.92□□□□□ -0.82
CDC42SE2-201ENST00000360515 MST1RQ04912 1400 aa9.92□□□□□ -0.82
CDC42SE2-201ENST00000360515 CFAP65Q6ZU64 1925 aaKnown RBP9.91□□□□□ -0.82
CDC42SE2-201ENST00000360515 SLC52A1Q9NWF4 448 aa9.91□□□□□ -0.82
CDC42SE2-201ENST00000360515 ABCA3Q99758 1704 aa9.91□□□□□ -0.82
CDC42SE2-201ENST00000360515 MYT1LQ9UL68 1186 aa9.9□□□□□ -0.82
CDC42SE2-201ENST00000360515 DAPK1P53355 1430 aa9.9□□□□□ -0.82
CDC42SE2-201ENST00000360515 EID1Q9Y6B2 187 aa9.9□□□□□ -0.83
CDC42SE2-201ENST00000360515 CCDC125Q86Z20 511 aa9.89□□□□□ -0.83
CDC42SE2-201ENST00000360515 SLAIN2Q9P270 581 aa9.89□□□□□ -0.83
CDC42SE2-201ENST00000360515 RGPD3A6NKT7 1758 aaPredicted RBP9.89□□□□□ -0.83
CDC42SE2-201ENST00000360515 RGPD4Q7Z3J3 1758 aa9.89□□□□□ -0.83
CDC42SE2-201ENST00000360515 TXNDC2Q86VQ3 553 aa9.89□□□□□ -0.83
CDC42SE2-201ENST00000360515 CDC42BPGQ6DT37 1551 aa9.89□□□□□ -0.83
CDC42SE2-201ENST00000360515 RGPD1P0DJD0 1748 aa9.88□□□□□ -0.83
CDC42SE2-201ENST00000360515 MYOM2P54296 1465 aa9.88□□□□□ -0.83
CDC42SE2-201ENST00000360515 BCL9LQ86UU0 1499 aa9.88□□□□□ -0.83
CDC42SE2-201ENST00000360515 KIF1AQ12756 1690 aa9.88□□□□□ -0.83
CDC42SE2-201ENST00000360515 RIMS2Q9UQ26 1411 aa9.87□□□□□ -0.83
CDC42SE2-201ENST00000360515 ATAD2Q6PL18 1390 aa9.87□□□□□ -0.83
CDC42SE2-201ENST00000360515 PNPLA6Q8IY17 1366 aa9.87□□□□□ -0.83
CDC42SE2-201ENST00000360515 KIF15Q9NS87 1388 aa9.87□□□□□ -0.83
CDC42SE2-201ENST00000360515 BRWD3Q6RI45 1802 aa9.86□□□□□ -0.83
CDC42SE2-201ENST00000360515 NRAPQ86VF7 1730 aa9.86□□□□□ -0.83
CDC42SE2-201ENST00000360515 VPS8Q8N3P4 1428 aa9.86□□□□□ -0.83
CDC42SE2-201ENST00000360515 PTPRUQ92729 1446 aa9.86□□□□□ -0.83
CDC42SE2-201ENST00000360515 RREB1Q92766 1687 aa9.86□□□□□ -0.83
CDC42SE2-201ENST00000360515 ADGRL3Q9HAR2 1447 aa9.86□□□□□ -0.83
CDC42SE2-201ENST00000360515 CRYBG1Q9Y4K1 1723 aa9.86□□□□□ -0.83
CDC42SE2-201ENST00000360515 KANK1Q14678 1352 aa9.86□□□□□ -0.83
CDC42SE2-201ENST00000360515 UBTFP17480 764 aaKnown RBP9.85□□□□□ -0.83
CDC42SE2-201ENST00000360515 TNS1Q9HBL0 1735 aaKnown RBP9.85□□□□□ -0.83
CDC42SE2-201ENST00000360515 FOXD1Q16676 465 aa9.85□□□□□ -0.83
CDC42SE2-201ENST00000360515 ZNF777Q9ULD5 760 aaPredicted RBP9.85□□□□□ -0.83
CDC42SE2-201ENST00000360515 NEXMIFQ5QGS0 1516 aa9.85□□□□□ -0.83
CDC42SE2-201ENST00000360515 IFT172Q9UG01 1749 aa9.84□□□□□ -0.83
CDC42SE2-201ENST00000360515 DISP2A7MBM2 1401 aa9.84□□□□□ -0.83
CDC42SE2-201ENST00000360515 GLI3P10071 1580 aa9.84□□□□□ -0.83
CDC42SE2-201ENST00000360515 TSPY4P0CV99 314 aa9.84□□□□□ -0.83
CDC42SE2-201ENST00000360515 TSPY10P0CW01 314 aa9.84□□□□□ -0.83
CDC42SE2-201ENST00000360515 SCAF1Q9H7N4 1312 aaKnown RBP9.84□□□□□ -0.83
CDC42SE2-201ENST00000360515 RXRBP28702 533 aa9.83□□□□□ -0.84
CDC42SE2-201ENST00000360515 CADPS2Q86UW7 1296 aa9.83□□□□□ -0.84
CDC42SE2-201ENST00000360515 PLCH1Q4KWH8 1693 aa9.82□□□□□ -0.84
CDC42SE2-201ENST00000360515 RBM6P78332 1123 aaKnown RBP9.82□□□□□ -0.84
CDC42SE2-201ENST00000360515 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.82□□□□□ -0.84
CDC42SE2-201ENST00000360515 PXDNQ92626 1479 aa9.82□□□□□ -0.84
CDC42SE2-201ENST00000360515 C19orf44Q9H6X5 657 aa9.82□□□□□ -0.84
CDC42SE2-201ENST00000360515 PPLO60437 1756 aa9.82□□□□□ -0.84
CDC42SE2-201ENST00000360515 FNBP4Q8N3X1 1017 aaPredicted RBP9.82□□□□□ -0.84
CDC42SE2-201ENST00000360515 IDI1Q13907 227 aa9.81□□□□□ -0.84
CDC42SE2-201ENST00000360515 FMN2Q9NZ56 1722 aa9.81□□□□□ -0.84
CDC42SE2-201ENST00000360515 THSD7AQ9UPZ6 1657 aa9.81□□□□□ -0.84
CDC42SE2-201ENST00000360515 ROCK1Q13464 1354 aa9.81□□□□□ -0.84
CDC42SE2-201ENST00000360515 SLIT2O94813 1529 aa9.8□□□□□ -0.84
CDC42SE2-201ENST00000360515 KIF1BO60333 1816 aa9.8□□□□□ -0.84
CDC42SE2-201ENST00000360515 PROSER2Q86WR7 435 aaPredicted RBP9.8□□□□□ -0.84
CDC42SE2-201ENST00000360515 SOS2Q07890 1332 aaPredicted RBP9.79□□□□□ -0.84
CDC42SE2-201ENST00000360515 HDGFP51858 240 aaKnown RBP9.79□□□□□ -0.84
CDC42SE2-201ENST00000360515 USP32Q8NFA0 1604 aa9.79□□□□□ -0.84
CDC42SE2-201ENST00000360515 BRINP3Q76B58 766 aa9.79□□□□□ -0.84
CDC42SE2-201ENST00000360515 ANKRD30AQ9BXX3 1397 aa9.79□□□□□ -0.84
CDC42SE2-201ENST00000360515 TECPR2O15040 1411 aa9.78□□□□□ -0.84
CDC42SE2-201ENST00000360515 COL24A1Q17RW2 1714 aa9.78□□□□□ -0.84
CDC42SE2-201ENST00000360515 BLMP54132 1417 aaPredicted RBP9.78□□□□□ -0.84
CDC42SE2-201ENST00000360515 C1orf167Q5SNV9 1468 aa9.78□□□□□ -0.84
CDC42SE2-201ENST00000360515 ATP1B4Q9UN42 357 aaPredicted RBP9.77□□□□□ -0.85
CDC42SE2-201ENST00000360515 RALGAPBQ86X10 1494 aa9.77□□□□□ -0.85
CDC42SE2-201ENST00000360515 AFF2P51816 1311 aa9.76□□□□□ -0.85
CDC42SE2-201ENST00000360515 TRPM3Q9HCF6 1732 aaPredicted RBP9.76□□□□□ -0.85
CDC42SE2-201ENST00000360515 CLTCL1P53675 1640 aa9.75□□□□□ -0.85
CDC42SE2-201ENST00000360515 ADGRB2O60241 1585 aa9.75□□□□□ -0.85
CDC42SE2-201ENST00000360515 LRRC59Q96AG4 307 aaKnown RBP9.74□□□□□ -0.85
CDC42SE2-201ENST00000360515 NUP188Q5SRE5 1749 aa9.74□□□□□ -0.85
CDC42SE2-201ENST00000360515 ONECUT3O60422 494 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE2-201ENST00000360515 ALS2Q96Q42 1657 aa9.74□□□□□ -0.85
CDC42SE2-201ENST00000360515 RANGAP1P46060 587 aaPredicted RBP9.74□□□□□ -0.85
CDC42SE2-201ENST00000360515 HFM1A2PYH4 1435 aa9.74□□□□□ -0.85
CDC42SE2-201ENST00000360515 COL14A1Q05707 1796 aaKnown RBP9.72□□□□□ -0.85
CDC42SE2-201ENST00000360515 NGLY1Q96IV0 654 aa9.72□□□□□ -0.85
CDC42SE2-201ENST00000360515 CASZ1Q86V15 1759 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms