RNA–Protein interactions for RNA: ENST00000360495.9

CCDC144A-203, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,545 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-203ENST00000360495 NUP155O75694 1391 aa16.32■□□□□ 0.2
CCDC144A-203ENST00000360495 DDX19BQ9UMR2 479 aa16.31■□□□□ 0.2
CCDC144A-203ENST00000360495 FBXW7Q969H0 707 aa16.31■□□□□ 0.2
CCDC144A-203ENST00000360495 ZKSCAN1P17029 563 aaPredicted RBP16.31■□□□□ 0.2
CCDC144A-203ENST00000360495 DHX57Q6P158 1386 aaKnown RBP16.31■□□□□ 0.2
CCDC144A-203ENST00000360495 PAK3O75914 559 aaPredicted RBP16.3■□□□□ 0.2
CCDC144A-203ENST00000360495 ELL2O00472 640 aaPredicted RBP16.3■□□□□ 0.2
CCDC144A-203ENST00000360495 CCDC191Q8NCU4 936 aa16.3■□□□□ 0.2
CCDC144A-203ENST00000360495 ANO2Q9NQ90 1003 aa16.3■□□□□ 0.2
CCDC144A-203ENST00000360495 SMC3Q9UQE7 1217 aa16.3■□□□□ 0.2
CCDC144A-203ENST00000360495 CAVIN1Q6NZI2 390 aaKnown RBP16.29■□□□□ 0.2
CCDC144A-203ENST00000360495 RUFY2Q8WXA3 655 aa16.29■□□□□ 0.2
CCDC144A-203ENST00000360495 PANK3Q9H999 370 aa16.29■□□□□ 0.2
CCDC144A-203ENST00000360495 LEKR1Q6ZMV7 388 aa16.28■□□□□ 0.2
CCDC144A-203ENST00000360495 TERF2IPQ9NYB0 399 aa16.28■□□□□ 0.2
CCDC144A-203ENST00000360495 AKAP17AQ02040 695 aaKnown RBP16.28■□□□□ 0.2
CCDC144A-203ENST00000360495 HOOK1Q9UJC3 728 aaKnown RBP16.28■□□□□ 0.2
CCDC144A-203ENST00000360495 HDGFP51858 240 aaKnown RBP16.27■□□□□ 0.2
CCDC144A-203ENST00000360495 CCDC73Q6ZRK6 1079 aa16.27■□□□□ 0.2
CCDC144A-203ENST00000360495 ERCC4Q92889 916 aaPredicted RBP16.27■□□□□ 0.2
CCDC144A-203ENST00000360495 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.19
CCDC144A-203ENST00000360495 CPLX2Q6PUV4 134 aaKnown RBP16.27■□□□□ 0.19
CCDC144A-203ENST00000360495 DZIP1LQ8IYY4 767 aaKnown RBP16.26■□□□□ 0.19
CCDC144A-203ENST00000360495 ST20-MTHFSA0A0A6YYL1 179 aa16.26■□□□□ 0.19
CCDC144A-203ENST00000360495 TRIM29Q14134 588 aa16.26■□□□□ 0.19
CCDC144A-203ENST00000360495 APAF1O14727 1248 aa16.26■□□□□ 0.19
CCDC144A-203ENST00000360495 DCTN1Q14203 1278 aa16.26■□□□□ 0.19
CCDC144A-203ENST00000360495 CARMIL1Q5VZK9 1371 aa16.25■□□□□ 0.19
CCDC144A-203ENST00000360495 UQCRHLA0A096LP55 91 aa16.25■□□□□ 0.19
CCDC144A-203ENST00000360495 UQCRHP07919 91 aa16.25■□□□□ 0.19
CCDC144A-203ENST00000360495 VPS53Q5VIR6 699 aa16.25■□□□□ 0.19
CCDC144A-203ENST00000360495 TSPY26PQ9H489 355 aa16.25■□□□□ 0.19
CCDC144A-203ENST00000360495 TRIM5Q9C035 493 aa16.24■□□□□ 0.19
CCDC144A-203ENST00000360495 MBD3O95983 291 aa16.24■□□□□ 0.19
CCDC144A-203ENST00000360495 CCDC9Q9Y3X0 531 aaKnown RBP16.24■□□□□ 0.19
CCDC144A-203ENST00000360495 SYNE3Q6ZMZ3 975 aa16.24■□□□□ 0.19
CCDC144A-203ENST00000360495 HSP90AB3PQ58FF7 597 aa16.23■□□□□ 0.19
CCDC144A-203ENST00000360495 TSPYL1Q9H0U9 437 aa16.23■□□□□ 0.19
CCDC144A-203ENST00000360495 BAZ1AQ9NRL2 1556 aaPredicted RBP16.23■□□□□ 0.19
CCDC144A-203ENST00000360495 CPLX1O14810 134 aa16.23■□□□□ 0.19
CCDC144A-203ENST00000360495 CCDC47Q96A33 483 aaKnown RBP16.23■□□□□ 0.19
CCDC144A-203ENST00000360495 LNPKQ9C0E8 428 aa16.23■□□□□ 0.19
CCDC144A-203ENST00000360495 NAT10Q9H0A0 1025 aaKnown RBP16.23■□□□□ 0.19
CCDC144A-203ENST00000360495 LETM1O95202 739 aaPredicted RBP16.22■□□□□ 0.19
CCDC144A-203ENST00000360495 NAP1L1P55209 391 aaKnown RBP16.22■□□□□ 0.19
CCDC144A-203ENST00000360495 ANKRD30AQ9BXX3 1397 aa16.21■□□□□ 0.19
CCDC144A-203ENST00000360495 ERCC6Q03468 1493 aa16.21■□□□□ 0.19
CCDC144A-203ENST00000360495 PDILTQ8N807 584 aa16.21■□□□□ 0.19
CCDC144A-203ENST00000360495 GRPEL1Q9HAV7 217 aa16.21■□□□□ 0.19
CCDC144A-203ENST00000360495 RNF20Q5VTR2 975 aa16.21■□□□□ 0.19
CCDC144A-203ENST00000360495 CAGE1Q8TC20 777 aa16.21■□□□□ 0.19
CCDC144A-203ENST00000360495 CSB-PGBD3P0DP91 1061 aa16.2■□□□□ 0.18
CCDC144A-203ENST00000360495 PRPF40AO75400 957 aaKnown RBP16.2■□□□□ 0.18
CCDC144A-203ENST00000360495 ESPNB1AK53 854 aa16.2■□□□□ 0.18
CCDC144A-203ENST00000360495 WWC1Q8IX03 1113 aa16.2■□□□□ 0.18
CCDC144A-203ENST00000360495 EIF4G1Q04637 1599 aaKnown RBP16.19■□□□□ 0.18
CCDC144A-203ENST00000360495 GGT6Q6P531 493 aa16.19■□□□□ 0.18
CCDC144A-203ENST00000360495 CDC45O75419 566 aa16.19■□□□□ 0.18
CCDC144A-203ENST00000360495 PLCD4Q9BRC7 762 aa16.19■□□□□ 0.18
CCDC144A-203ENST00000360495 MAPK8IP2Q13387 824 aaPredicted RBP16.18■□□□□ 0.18
CCDC144A-203ENST00000360495 AXDND1Q5T1B0 1012 aaPredicted RBP16.18■□□□□ 0.18
CCDC144A-203ENST00000360495 FOSBP53539 338 aa16.18■□□□□ 0.18
CCDC144A-203ENST00000360495 CCDC112Q8NEF3 446 aa16.17■□□□□ 0.18
CCDC144A-203ENST00000360495 API5Q9BZZ5 524 aaKnown RBP16.17■□□□□ 0.18
CCDC144A-203ENST00000360495 CCP110O43303 1012 aa16.17■□□□□ 0.18
CCDC144A-203ENST00000360495 OLFM4Q6UX06 510 aa16.17■□□□□ 0.18
CCDC144A-203ENST00000360495 SPC24Q8NBT2 197 aa16.17■□□□□ 0.18
CCDC144A-203ENST00000360495 TTLL5Q6EMB2 1281 aa16.17■□□□□ 0.18
CCDC144A-203ENST00000360495 TAF3Q5VWG9 929 aa16.17■□□□□ 0.18
CCDC144A-203ENST00000360495 SDF4Q9BRK5 362 aa16.17■□□□□ 0.18
CCDC144A-203ENST00000360495 AAMPQ13685 434 aa16.16■□□□□ 0.18
CCDC144A-203ENST00000360495 NGEFQ8N5V2 710 aa16.16■□□□□ 0.18
CCDC144A-203ENST00000360495 SKIDA1Q1XH10 827 aa16.16■□□□□ 0.18
CCDC144A-203ENST00000360495 FBXO3Q9UK99 471 aa16.16■□□□□ 0.18
CCDC144A-203ENST00000360495 IFIT2P09913 472 aaKnown RBP16.16■□□□□ 0.18
CCDC144A-203ENST00000360495 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.16■□□□□ 0.18
CCDC144A-203ENST00000360495 USP47Q96K76 1375 aa16.16■□□□□ 0.18
CCDC144A-203ENST00000360495 SMC2O95347 1197 aa16.15■□□□□ 0.18
CCDC144A-203ENST00000360495 CUX2O14529 1486 aa16.15■□□□□ 0.18
CCDC144A-203ENST00000360495 LRRFIP1Q32MZ4 808 aaKnown RBP16.15■□□□□ 0.18
CCDC144A-203ENST00000360495 PANK1Q8TE04 598 aa16.15■□□□□ 0.18
CCDC144A-203ENST00000360495 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.15■□□□□ 0.18
CCDC144A-203ENST00000360495 ROCK1Q13464 1354 aa16.14■□□□□ 0.17
CCDC144A-203ENST00000360495 CCDC27Q2M243 656 aa16.14■□□□□ 0.17
CCDC144A-203ENST00000360495 AMPHP49418 695 aa16.14■□□□□ 0.17
CCDC144A-203ENST00000360495 ERICH4A6NGS2 130 aa16.13■□□□□ 0.17
CCDC144A-203ENST00000360495 KIAA0754O94854 1291 aa16.13■□□□□ 0.17
CCDC144A-203ENST00000360495 CT47B1P0C2W7 299 aaPredicted RBP16.13■□□□□ 0.17
CCDC144A-203ENST00000360495 MPNDQ8N594 471 aa16.13■□□□□ 0.17
CCDC144A-203ENST00000360495 BACH2Q9BYV9 841 aa16.13■□□□□ 0.17
CCDC144A-203ENST00000360495 MLECQ14165 292 aa16.12■□□□□ 0.17
CCDC144A-203ENST00000360495 DEF6Q9H4E7 631 aa16.12■□□□□ 0.17
CCDC144A-203ENST00000360495 USP8P40818 1118 aa16.11■□□□□ 0.17
CCDC144A-203ENST00000360495 TRDNQ13061 729 aa16.11■□□□□ 0.17
CCDC144A-203ENST00000360495 LTV1Q96GA3 475 aaPredicted RBP16.1■□□□□ 0.17
CCDC144A-203ENST00000360495 PRDM10Q9NQV6 1147 aa16.1■□□□□ 0.17
CCDC144A-203ENST00000360495 PDCL2Q8N4E4 241 aa16.1■□□□□ 0.17
CCDC144A-203ENST00000360495 C9orf78Q9NZ63 289 aaPredicted RBP16.1■□□□□ 0.17
CCDC144A-203ENST00000360495 KINO60870 393 aaKnown RBP16.1■□□□□ 0.17
CCDC144A-203ENST00000360495 SAFBQ15424 915 aaKnown RBP eCLIP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms