RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 SOX12O15370 315 aa16.01■□□□□ 0.15
SRGAP3-201ENST00000360413 RUFY2Q8WXA3 655 aa16.01■□□□□ 0.15
SRGAP3-201ENST00000360413 SASS6Q6UVJ0 657 aa16.01■□□□□ 0.15
SRGAP3-201ENST00000360413 ROCK1Q13464 1354 aa16■□□□□ 0.15
SRGAP3-201ENST00000360413 NACADO15069 1562 aa16■□□□□ 0.15
SRGAP3-201ENST00000360413 WWC2Q6AWC2 1192 aa16■□□□□ 0.15
SRGAP3-201ENST00000360413 TOMM22Q9NS69 142 aa16■□□□□ 0.15
SRGAP3-201ENST00000360413 PDE3BQ13370 1112 aa16■□□□□ 0.15
SRGAP3-201ENST00000360413 CARMIL2Q6F5E8 1435 aa16■□□□□ 0.15
SRGAP3-201ENST00000360413 CWC22Q9HCG8 908 aaKnown RBP16■□□□□ 0.15
SRGAP3-201ENST00000360413 STK11IPQ8N1F8 1099 aa15.99■□□□□ 0.15
SRGAP3-201ENST00000360413 RILPL2Q969X0 211 aa15.99■□□□□ 0.15
SRGAP3-201ENST00000360413 UACAQ9BZF9 1416 aa15.99■□□□□ 0.15
SRGAP3-201ENST00000360413 HMGN5P82970 282 aaKnown RBP15.99■□□□□ 0.15
SRGAP3-201ENST00000360413 CAGE1Q8TC20 777 aa15.99■□□□□ 0.15
SRGAP3-201ENST00000360413 BICD2Q8TD16 824 aa15.99■□□□□ 0.15
SRGAP3-201ENST00000360413 DEF6Q9H4E7 631 aa15.99■□□□□ 0.15
SRGAP3-201ENST00000360413 CCDC9Q9Y3X0 531 aaKnown RBP15.98■□□□□ 0.15
SRGAP3-201ENST00000360413 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.98■□□□□ 0.15
SRGAP3-201ENST00000360413 NAP1L1P55209 391 aaKnown RBP15.98■□□□□ 0.15
SRGAP3-201ENST00000360413 TRHP20396 242 aaPredicted RBP15.97■□□□□ 0.15
SRGAP3-201ENST00000360413 SKIDA1Q1XH10 827 aa15.97■□□□□ 0.15
SRGAP3-201ENST00000360413 SLC4A10Q6U841 1118 aa15.97■□□□□ 0.15
SRGAP3-201ENST00000360413 ANKRD45Q5TZF3 282 aa15.97■□□□□ 0.15
SRGAP3-201ENST00000360413 EIF4G1Q04637 1599 aaKnown RBP15.97■□□□□ 0.15
SRGAP3-201ENST00000360413 NEXNQ0ZGT2 675 aa15.97■□□□□ 0.15
SRGAP3-201ENST00000360413 FBXW7Q969H0 707 aa15.97■□□□□ 0.15
SRGAP3-201ENST00000360413 EPS15P42566 896 aa15.96■□□□□ 0.15
SRGAP3-201ENST00000360413 WRNQ14191 1432 aaPredicted RBP eCLIP15.96■□□□□ 0.15
SRGAP3-201ENST00000360413 RNF20Q5VTR2 975 aa15.96■□□□□ 0.14
SRGAP3-201ENST00000360413 ANKRD18AQ8IVF6 992 aa15.96■□□□□ 0.14
SRGAP3-201ENST00000360413 KIAA0754O94854 1291 aa15.96■□□□□ 0.14
SRGAP3-201ENST00000360413 DYDC1Q8WWB3 177 aa15.95■□□□□ 0.14
SRGAP3-201ENST00000360413 TRDNQ13061 729 aa15.95■□□□□ 0.14
SRGAP3-201ENST00000360413 REC8O95072 547 aa15.95■□□□□ 0.14
SRGAP3-201ENST00000360413 ZKSCAN1P17029 563 aaPredicted RBP15.95■□□□□ 0.14
SRGAP3-201ENST00000360413 DHX8Q14562 1220 aaKnown RBP15.95■□□□□ 0.14
SRGAP3-201ENST00000360413 NAT10Q9H0A0 1025 aaKnown RBP15.95■□□□□ 0.14
SRGAP3-201ENST00000360413 NUCB2P80303 420 aa15.94■□□□□ 0.14
SRGAP3-201ENST00000360413 AXDND1Q5T1B0 1012 aaPredicted RBP15.94■□□□□ 0.14
SRGAP3-201ENST00000360413 ERICH2A1L162 156 aa15.94■□□□□ 0.14
SRGAP3-201ENST00000360413 CCDC146Q8IYE0 955 aa15.94■□□□□ 0.14
SRGAP3-201ENST00000360413 RRP1P56182 461 aaKnown RBP15.94■□□□□ 0.14
SRGAP3-201ENST00000360413 USP8P40818 1118 aa15.94■□□□□ 0.14
SRGAP3-201ENST00000360413 PLIN1O60240 522 aa15.93■□□□□ 0.14
SRGAP3-201ENST00000360413 BRMS1Q9HCU9 246 aa15.93■□□□□ 0.14
SRGAP3-201ENST00000360413 VPS37DQ86XT2 251 aa15.92■□□□□ 0.14
SRGAP3-201ENST00000360413 EXOC6Q8TAG9 804 aa15.92■□□□□ 0.14
SRGAP3-201ENST00000360413 CRBNQ96SW2 442 aa15.92■□□□□ 0.14
SRGAP3-201ENST00000360413 SETD5Q9C0A6 1442 aa15.92■□□□□ 0.14
SRGAP3-201ENST00000360413 UQCRHLA0A096LP55 91 aa15.92■□□□□ 0.14
SRGAP3-201ENST00000360413 UQCRHP07919 91 aa15.92■□□□□ 0.14
SRGAP3-201ENST00000360413 SAFBQ15424 915 aaKnown RBP eCLIP15.92■□□□□ 0.14
SRGAP3-201ENST00000360413 TXLNBQ8N3L3 684 aa15.92■□□□□ 0.14
SRGAP3-201ENST00000360413 CGNL1Q0VF96 1302 aa15.91■□□□□ 0.14
SRGAP3-201ENST00000360413 XBP1P17861 261 aa15.9■□□□□ 0.14
SRGAP3-201ENST00000360413 RNF214Q8ND24 703 aa15.9■□□□□ 0.14
SRGAP3-201ENST00000360413 ERICH4A6NGS2 130 aa15.9■□□□□ 0.14
SRGAP3-201ENST00000360413 CT47B1P0C2W7 299 aaPredicted RBP15.9■□□□□ 0.14
SRGAP3-201ENST00000360413 AMPHP49418 695 aa15.9■□□□□ 0.14
SRGAP3-201ENST00000360413 CPLX1O14810 134 aa15.9■□□□□ 0.14
SRGAP3-201ENST00000360413 TRAK2O60296 914 aa15.9■□□□□ 0.14
SRGAP3-201ENST00000360413 C1orf141Q5JVX7 400 aa15.9■□□□□ 0.14
SRGAP3-201ENST00000360413 PDILTQ8N807 584 aa15.89■□□□□ 0.14
SRGAP3-201ENST00000360413 GOLGA6L7A0A1B0GV03 622 aa15.89■□□□□ 0.13
SRGAP3-201ENST00000360413 TNIKQ9UKE5 1360 aa15.89■□□□□ 0.13
SRGAP3-201ENST00000360413 INCENPQ9NQS7 918 aa15.89■□□□□ 0.13
SRGAP3-201ENST00000360413 AEBP1Q8IUX7 1158 aa15.89■□□□□ 0.13
SRGAP3-201ENST00000360413 CCP110O43303 1012 aa15.88■□□□□ 0.13
SRGAP3-201ENST00000360413 TTLL5Q6EMB2 1281 aa15.88■□□□□ 0.13
SRGAP3-201ENST00000360413 HMGB2P26583 209 aaKnown RBP15.88■□□□□ 0.13
SRGAP3-201ENST00000360413 SAFB2Q14151 953 aaKnown RBP eCLIP15.88■□□□□ 0.13
SRGAP3-201ENST00000360413 LUC7LQ9NQ29 371 aaKnown RBP15.87■□□□□ 0.13
SRGAP3-201ENST00000360413 NGEFQ8N5V2 710 aa15.87■□□□□ 0.13
SRGAP3-201ENST00000360413 VPS37CA5D8V6 355 aaPredicted RBP15.87■□□□□ 0.13
SRGAP3-201ENST00000360413 RSPH4AQ5TD94 716 aa15.87■□□□□ 0.13
SRGAP3-201ENST00000360413 ERLIN2O94905 339 aa15.87■□□□□ 0.13
SRGAP3-201ENST00000360413 HSP90AB2PQ58FF8 381 aa15.87■□□□□ 0.13
SRGAP3-201ENST00000360413 TRIM5Q9C035 493 aa15.87■□□□□ 0.13
SRGAP3-201ENST00000360413 ZBED9Q6R2W3 1325 aa15.87■□□□□ 0.13
SRGAP3-201ENST00000360413 NLRP13Q86W25 1043 aa15.86■□□□□ 0.13
SRGAP3-201ENST00000360413 GIMAP7Q8NHV1 300 aa15.86■□□□□ 0.13
SRGAP3-201ENST00000360413 CAVIN1Q6NZI2 390 aaKnown RBP15.86■□□□□ 0.13
SRGAP3-201ENST00000360413 DHX37Q8IY37 1157 aaKnown RBP15.86■□□□□ 0.13
SRGAP3-201ENST00000360413 NGDNQ8NEJ9 315 aaKnown RBP15.86■□□□□ 0.13
SRGAP3-201ENST00000360413 OFD1O75665 1012 aa15.86■□□□□ 0.13
SRGAP3-201ENST00000360413 TRIM21P19474 475 aaKnown RBP15.86■□□□□ 0.13
SRGAP3-201ENST00000360413 CCDC73Q6ZRK6 1079 aa15.86■□□□□ 0.13
SRGAP3-201ENST00000360413 ANO2Q9NQ90 1003 aa15.86■□□□□ 0.13
SRGAP3-201ENST00000360413 DDX58O95786 925 aaKnown RBP15.85■□□□□ 0.13
SRGAP3-201ENST00000360413 LETM1O95202 739 aaPredicted RBP15.85■□□□□ 0.13
SRGAP3-201ENST00000360413 SMC3Q9UQE7 1217 aa15.85■□□□□ 0.13
SRGAP3-201ENST00000360413 DESP17661 470 aa15.85■□□□□ 0.13
SRGAP3-201ENST00000360413 MEX3CQ5U5Q3 659 aaKnown RBP15.85■□□□□ 0.13
SRGAP3-201ENST00000360413 ANKRD30AQ9BXX3 1397 aa15.85■□□□□ 0.13
SRGAP3-201ENST00000360413 GOLGA6L10A6NI86 522 aa15.84■□□□□ 0.13
SRGAP3-201ENST00000360413 OLFM4Q6UX06 510 aa15.84■□□□□ 0.13
SRGAP3-201ENST00000360413 FMN1Q68DA7 1419 aa15.84■□□□□ 0.13
SRGAP3-201ENST00000360413 TSPY26PQ9H489 355 aa15.84■□□□□ 0.13
SRGAP3-201ENST00000360413 FOXD1Q16676 465 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms