RNA–Protein interactions for RNA: ENST00000359979.8

CCSER2-202, Transcript of coiled-coil serine rich protein 2, humanhuman

TSL 1 (best) BASIC

Gene CCSER2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER2-202ENST00000359979 MS4A1P11836 297 aa29.64■■■□□ 2.34
CCSER2-202ENST00000359979 CLTCL1P53675 1640 aa29.64■■■□□ 2.34
CCSER2-202ENST00000359979 PAK3O75914 559 aaPredicted RBP29.63■■■□□ 2.33
CCSER2-202ENST00000359979 VWDEQ8N2E2 1590 aa29.62■■■□□ 2.33
CCSER2-202ENST00000359979 KIAA1210Q9ULL0 1709 aa29.61■■■□□ 2.33
CCSER2-202ENST00000359979 NPC1L1Q9UHC9 1359 aa29.61■■■□□ 2.33
CCSER2-202ENST00000359979 AMER1Q5JTC6 1135 aaPredicted RBP29.61■■■□□ 2.33
CCSER2-202ENST00000359979 PPP2R1AP30153 589 aa29.6■■■□□ 2.33
CCSER2-202ENST00000359979 EIF3AQ14152 1382 aaKnown RBP29.6■■■□□ 2.33
CCSER2-202ENST00000359979 ADAMTS8Q9UP79 889 aa29.6■■■□□ 2.33
CCSER2-202ENST00000359979 ASXL1Q8IXJ9 1541 aa29.59■■■□□ 2.33
CCSER2-202ENST00000359979 PIK3C2GO75747 1445 aa29.58■■■□□ 2.33
CCSER2-202ENST00000359979 ZBTB47Q9UFB7 747 aaPredicted RBP29.58■■■□□ 2.33
CCSER2-202ENST00000359979 KANK1Q14678 1352 aa29.58■■■□□ 2.33
CCSER2-202ENST00000359979 AFAP1Q8N556 730 aa29.57■■■□□ 2.32
CCSER2-202ENST00000359979 INO80Q9ULG1 1556 aaPredicted RBP29.57■■■□□ 2.32
CCSER2-202ENST00000359979 CYB5RLQ6IPT4 315 aa29.56■■■□□ 2.32
CCSER2-202ENST00000359979 ATP7AQ04656 1500 aa29.55■■■□□ 2.32
CCSER2-202ENST00000359979 WDR43Q15061 677 aaKnown RBP eCLIP29.55■■■□□ 2.32
CCSER2-202ENST00000359979 DNAJC5Q9H3Z4 198 aa29.55■■■□□ 2.32
CCSER2-202ENST00000359979 SLC24A1O60721 1099 aa29.54■■■□□ 2.32
CCSER2-202ENST00000359979 ABCA9Q8IUA7 1624 aa29.53■■■□□ 2.32
CCSER2-202ENST00000359979 MYOM1P52179 1685 aa29.53■■■□□ 2.32
CCSER2-202ENST00000359979 PDE4AP27815 886 aa29.52■■■□□ 2.32
CCSER2-202ENST00000359979 BACH2Q9BYV9 841 aa29.52■■■□□ 2.32
CCSER2-202ENST00000359979 ZNF521Q96K83 1311 aa29.51■■■□□ 2.31
CCSER2-202ENST00000359979 PLIN1O60240 522 aa29.51■■■□□ 2.31
CCSER2-202ENST00000359979 CRBNQ96SW2 442 aa29.51■■■□□ 2.31
CCSER2-202ENST00000359979 MYOM2P54296 1465 aa29.5■■■□□ 2.31
CCSER2-202ENST00000359979 PLEKHH1Q9ULM0 1364 aa29.49■■■□□ 2.31
CCSER2-202ENST00000359979 KDM5AP29375 1690 aaKnown RBP29.49■■■□□ 2.31
CCSER2-202ENST00000359979 FANCAO15360 1455 aa29.48■■■□□ 2.31
CCSER2-202ENST00000359979 DUSP27Q5VZP5 1158 aa29.47■■■□□ 2.31
CCSER2-202ENST00000359979 MAP3K4Q9Y6R4 1608 aa29.45■■■□□ 2.31
CCSER2-202ENST00000359979 GOLGA2Q08379 1002 aa29.44■■■□□ 2.3
CCSER2-202ENST00000359979 MROH1Q8NDA8 1641 aa29.43■■■□□ 2.3
CCSER2-202ENST00000359979 DEKP35659 375 aaKnown RBP29.43■■■□□ 2.3
CCSER2-202ENST00000359979 NBR1Q14596 966 aa29.4■■■□□ 2.3
CCSER2-202ENST00000359979 KIF3BO15066 747 aa29.4■■■□□ 2.3
CCSER2-202ENST00000359979 ABCA6Q8N139 1617 aa29.39■■■□□ 2.3
CCSER2-202ENST00000359979 ADGRL1O94910 1474 aa29.39■■■□□ 2.3
CCSER2-202ENST00000359979 GOLGA6L2Q8N9W4 650 aaPredicted RBP29.39■■■□□ 2.3
CCSER2-202ENST00000359979 ERVK-7P63135 1459 aa29.38■■■□□ 2.29
CCSER2-202ENST00000359979 KDM2BQ8NHM5 1336 aa29.38■■■□□ 2.29
CCSER2-202ENST00000359979 EFCAB6Q5THR3 1501 aa29.37■■■□□ 2.29
CCSER2-202ENST00000359979 SLFN5Q08AF3 891 aa29.36■■■□□ 2.29
CCSER2-202ENST00000359979 C20orf194Q5TEA3 1177 aa29.36■■■□□ 2.29
CCSER2-202ENST00000359979 TRMT2AQ8IZ69 625 aaKnown RBP29.36■■■□□ 2.29
CCSER2-202ENST00000359979 IFT172Q9UG01 1749 aa29.36■■■□□ 2.29
CCSER2-202ENST00000359979 NRXN1Q9ULB1 1477 aa29.36■■■□□ 2.29
CCSER2-202ENST00000359979 KIF1BO60333 1816 aa29.35■■■□□ 2.29
CCSER2-202ENST00000359979 SBNO2Q9Y2G9 1366 aa29.35■■■□□ 2.29
CCSER2-202ENST00000359979 CENPQQ7L2Z9 268 aaPredicted RBP29.35■■■□□ 2.29
CCSER2-202ENST00000359979 NGEFQ8N5V2 710 aa29.35■■■□□ 2.29
CCSER2-202ENST00000359979 MYO3AQ8NEV4 1616 aa29.35■■■□□ 2.29
CCSER2-202ENST00000359979 NPM2Q86SE8 214 aaKnown RBP29.34■■■□□ 2.29
CCSER2-202ENST00000359979 LMTK2Q8IWU2 1503 aa29.34■■■□□ 2.29
CCSER2-202ENST00000359979 CFAP70Q5T0N1 1121 aa29.32■■■□□ 2.28
CCSER2-202ENST00000359979 RTL5Q5HYW3 569 aaPredicted RBP29.32■■■□□ 2.28
CCSER2-202ENST00000359979 UGGT1Q9NYU2 1555 aa29.31■■■□□ 2.28
CCSER2-202ENST00000359979 ADGRF5Q8IZF2 1346 aa29.3■■■□□ 2.28
CCSER2-202ENST00000359979 SETBP1Q9Y6X0 1596 aa29.28■■■□□ 2.28
CCSER2-202ENST00000359979 NKTRP30414 1462 aaKnown RBP29.28■■■□□ 2.28
CCSER2-202ENST00000359979 PPRC1Q5VV67 1664 aaKnown RBP29.27■■■□□ 2.28
CCSER2-202ENST00000359979 NPM1P06748 294 aaKnown RBP eCLIP29.27■■■□□ 2.28
CCSER2-202ENST00000359979 DDRGK1Q96HY6 314 aa29.25■■■□□ 2.27
CCSER2-202ENST00000359979 KIDINS220Q9ULH0 1771 aa29.25■■■□□ 2.27
CCSER2-202ENST00000359979 MROH2AA6NES4 1674 aa29.25■■■□□ 2.27
CCSER2-202ENST00000359979 ADGRB3O60242 1522 aa29.24■■■□□ 2.27
CCSER2-202ENST00000359979 E9PSI1 815 aa29.24■■■□□ 2.27
CCSER2-202ENST00000359979 CARD14Q9BXL6 1004 aa29.24■■■□□ 2.27
CCSER2-202ENST00000359979 APAF1O14727 1248 aa29.22■■■□□ 2.27
CCSER2-202ENST00000359979 CCDC146Q8IYE0 955 aa29.22■■■□□ 2.27
CCSER2-202ENST00000359979 POLR3AO14802 1390 aaPredicted RBP29.22■■■□□ 2.27
CCSER2-202ENST00000359979 ZNF518AQ6AHZ1 1483 aa29.21■■■□□ 2.27
CCSER2-202ENST00000359979 ASXL2Q76L83 1435 aa29.2■■■□□ 2.27
CCSER2-202ENST00000359979 USP35Q9P2H5 1018 aa29.2■■■□□ 2.26
CCSER2-202ENST00000359979 CENPJQ9HC77 1338 aaPredicted RBP29.17■■■□□ 2.26
CCSER2-202ENST00000359979 SKAP1Q86WV1 359 aa29.17■■■□□ 2.26
CCSER2-202ENST00000359979 SPINK5Q9NQ38 1064 aaPredicted RBP29.16■■■□□ 2.26
CCSER2-202ENST00000359979 NOS1P29475 1434 aa29.16■■■□□ 2.26
CCSER2-202ENST00000359979 PPM1GO15355 546 aaPredicted RBP29.16■■■□□ 2.26
CCSER2-202ENST00000359979 NINLQ9Y2I6 1382 aa29.14■■■□□ 2.26
CCSER2-202ENST00000359979 FAM161AQ3B820 660 aa29.14■■■□□ 2.25
CCSER2-202ENST00000359979 ZC3H13Q5T200 1668 aaKnown RBP29.12■■■□□ 2.25
CCSER2-202ENST00000359979 PPLO60437 1756 aa29.11■■■□□ 2.25
CCSER2-202ENST00000359979 C14orf93Q9H972 538 aaKnown RBP29.11■■■□□ 2.25
CCSER2-202ENST00000359979 ADGRB1O14514 1584 aa29.09■■■□□ 2.25
CCSER2-202ENST00000359979 RPGRIP1LQ68CZ1 1315 aa29.09■■■□□ 2.25
CCSER2-202ENST00000359979 CFAP74Q9C0B2 1584 aa29.09■■■□□ 2.25
CCSER2-202ENST00000359979 USP32Q8NFA0 1604 aa29.09■■■□□ 2.25
CCSER2-202ENST00000359979 NPATQ14207 1427 aa29.08■■■□□ 2.25
CCSER2-202ENST00000359979 NSD3Q9BZ95 1437 aa29.08■■■□□ 2.25
CCSER2-202ENST00000359979 PDE3AQ14432 1141 aa29.08■■■□□ 2.25
CCSER2-202ENST00000359979 C8orf34Q49A92 452 aa29.07■■■□□ 2.24
CCSER2-202ENST00000359979 MLH3Q9UHC1 1453 aa29.07■■■□□ 2.24
CCSER2-202ENST00000359979 QRICH2Q9H0J4 1663 aa29.07■■■□□ 2.24
CCSER2-202ENST00000359979 BCAR3O75815 825 aa29.06■■■□□ 2.24
CCSER2-202ENST00000359979 SHPRHQ149N8 1683 aa29.06■■■□□ 2.24
CCSER2-202ENST00000359979 CGNL1Q0VF96 1302 aa29.06■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms