RNA–Protein interactions for RNA: ENST00000359276.8

CTPS2-201, Transcript of CTP synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTPS2, Length 3,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2-201ENST00000359276 ITPRIPQ8IWB1 547 aa20.72■□□□□ 0.91
CTPS2-201ENST00000359276 ERBINQ96RT1 1412 aa20.71■□□□□ 0.91
CTPS2-201ENST00000359276 BLMP54132 1417 aaPredicted RBP20.71■□□□□ 0.91
CTPS2-201ENST00000359276 EIF3AQ14152 1382 aaKnown RBP20.7■□□□□ 0.9
CTPS2-201ENST00000359276 R3HCC1Q9Y3T6 440 aaKnown RBP20.7■□□□□ 0.9
CTPS2-201ENST00000359276 LRRIQ1Q96JM4 1722 aa20.7■□□□□ 0.9
CTPS2-201ENST00000359276 RLBP1P12271 317 aa20.7■□□□□ 0.9
CTPS2-201ENST00000359276 FSD2A1L4K1 749 aa20.69■□□□□ 0.9
CTPS2-201ENST00000359276 DNMBPQ6XZF7 1577 aa20.69■□□□□ 0.9
CTPS2-201ENST00000359276 ERBB4Q15303 1308 aa20.69■□□□□ 0.9
CTPS2-201ENST00000359276 A0A0U1RQG5 324 aaPredicted RBP20.69■□□□□ 0.9
CTPS2-201ENST00000359276 DDX49Q9Y6V7 483 aaKnown RBP20.69■□□□□ 0.9
CTPS2-201ENST00000359276 ARHGEF11O15085 1522 aa20.68■□□□□ 0.9
CTPS2-201ENST00000359276 NKTRP30414 1462 aaKnown RBP20.68■□□□□ 0.9
CTPS2-201ENST00000359276 CC2D2AQ9P2K1 1620 aa20.68■□□□□ 0.9
CTPS2-201ENST00000359276 ZMYM4Q5VZL5 1548 aa20.68■□□□□ 0.9
CTPS2-201ENST00000359276 MBD5Q9P267 1494 aa20.68■□□□□ 0.9
CTPS2-201ENST00000359276 KIF14Q15058 1648 aa20.68■□□□□ 0.9
CTPS2-201ENST00000359276 PLEKHH2Q8IVE3 1493 aa20.67■□□□□ 0.9
CTPS2-201ENST00000359276 SENP3Q9H4L4 574 aaPredicted RBP20.67■□□□□ 0.9
CTPS2-201ENST00000359276 CAMSAP2Q08AD1 1489 aa20.67■□□□□ 0.9
CTPS2-201ENST00000359276 NASPP49321 788 aaPredicted RBP20.67■□□□□ 0.9
CTPS2-201ENST00000359276 WWC1Q8IX03 1113 aa20.66■□□□□ 0.9
CTPS2-201ENST00000359276 KIAA0586Q9BVV6 1533 aa20.66■□□□□ 0.9
CTPS2-201ENST00000359276 UHRF1BP1Q6BDS2 1440 aa20.66■□□□□ 0.9
CTPS2-201ENST00000359276 TPRNQ4KMQ1 711 aa20.65■□□□□ 0.9
CTPS2-201ENST00000359276 MORC1Q86VD1 984 aa20.65■□□□□ 0.9
CTPS2-201ENST00000359276 TNPO1Q92973 898 aaKnown RBP20.65■□□□□ 0.9
CTPS2-201ENST00000359276 PODXL2Q9NZ53 605 aa20.65■□□□□ 0.9
CTPS2-201ENST00000359276 AMER1Q5JTC6 1135 aaPredicted RBP20.65■□□□□ 0.9
CTPS2-201ENST00000359276 SMC4Q9NTJ3 1288 aa20.65■□□□□ 0.9
CTPS2-201ENST00000359276 TPM2P07951 284 aa20.64■□□□□ 0.9
CTPS2-201ENST00000359276 GAS2L3Q86XJ1 694 aa20.64■□□□□ 0.9
CTPS2-201ENST00000359276 LNPKQ9C0E8 428 aa20.64■□□□□ 0.9
CTPS2-201ENST00000359276 CHMP7Q8WUX9 453 aaPredicted RBP20.64■□□□□ 0.89
CTPS2-201ENST00000359276 SAMD9Q5K651 1589 aa20.63■□□□□ 0.89
CTPS2-201ENST00000359276 POLR1AO95602 1720 aaPredicted RBP20.63■□□□□ 0.89
CTPS2-201ENST00000359276 RARSP54136 660 aaKnown RBP20.63■□□□□ 0.89
CTPS2-201ENST00000359276 TCP11L2Q8N4U5 519 aa20.62■□□□□ 0.89
CTPS2-201ENST00000359276 PDCL3Q9H2J4 239 aa20.62■□□□□ 0.89
CTPS2-201ENST00000359276 CHGAP10645 457 aaKnown RBP20.61■□□□□ 0.89
CTPS2-201ENST00000359276 DNTTIP2Q5QJE6 756 aaKnown RBP20.61■□□□□ 0.89
CTPS2-201ENST00000359276 ZNF521Q96K83 1311 aa20.61■□□□□ 0.89
CTPS2-201ENST00000359276 C9orf84Q5VXU9 1444 aa20.61■□□□□ 0.89
CTPS2-201ENST00000359276 U2AF1L5P0DN76 240 aaPredicted RBP20.6■□□□□ 0.89
CTPS2-201ENST00000359276 U2AF1Q01081 240 aaKnown RBP eCLIP20.6■□□□□ 0.89
CTPS2-201ENST00000359276 ZKSCAN2Q63HK3 967 aa20.59■□□□□ 0.89
CTPS2-201ENST00000359276 DZIP1LQ8IYY4 767 aaKnown RBP20.59■□□□□ 0.89
CTPS2-201ENST00000359276 PTMAP06454 111 aaKnown RBP20.59■□□□□ 0.89
CTPS2-201ENST00000359276 DNMT1P26358 1616 aaKnown RBP20.58■□□□□ 0.89
CTPS2-201ENST00000359276 U2SURPO15042 1029 aaKnown RBP20.58■□□□□ 0.89
CTPS2-201ENST00000359276 FOXD4L5Q5VV16 416 aaPredicted RBP20.58■□□□□ 0.88
CTPS2-201ENST00000359276 FOXD4L4Q8WXT5 416 aaPredicted RBP20.58■□□□□ 0.88
CTPS2-201ENST00000359276 SKOR2Q2VWA4 1001 aaPredicted RBP20.57■□□□□ 0.88
CTPS2-201ENST00000359276 TSR2Q969E8 191 aaKnown RBP20.57■□□□□ 0.88
CTPS2-201ENST00000359276 PRAG1Q86YV5 1406 aa20.57■□□□□ 0.88
CTPS2-201ENST00000359276 CALD1Q05682 793 aaKnown RBP20.57■□□□□ 0.88
CTPS2-201ENST00000359276 TROQ12816 1431 aaPredicted RBP20.56■□□□□ 0.88
CTPS2-201ENST00000359276 PRDM10Q9NQV6 1147 aa20.55■□□□□ 0.88
CTPS2-201ENST00000359276 XPCQ01831 940 aaPredicted RBP20.55■□□□□ 0.88
CTPS2-201ENST00000359276 ZSCAN30Q86W11 494 aa20.55■□□□□ 0.88
CTPS2-201ENST00000359276 MCTP1Q6DN14 999 aa20.55■□□□□ 0.88
CTPS2-201ENST00000359276 CAVIN1Q6NZI2 390 aaKnown RBP20.55■□□□□ 0.88
CTPS2-201ENST00000359276 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.54■□□□□ 0.88
CTPS2-201ENST00000359276 MPNDQ8N594 471 aa20.54■□□□□ 0.88
CTPS2-201ENST00000359276 SSFA2P28290 1259 aa20.53■□□□□ 0.88
CTPS2-201ENST00000359276 CCDC173Q0VFZ6 552 aa20.53■□□□□ 0.88
CTPS2-201ENST00000359276 MVPQ14764 893 aaKnown RBP20.53■□□□□ 0.88
CTPS2-201ENST00000359276 ANKRD45Q5TZF3 282 aa20.53■□□□□ 0.88
CTPS2-201ENST00000359276 TRMT2AQ8IZ69 625 aaKnown RBP20.53■□□□□ 0.88
CTPS2-201ENST00000359276 CFAP53Q96M91 514 aa20.53■□□□□ 0.88
CTPS2-201ENST00000359276 GPATCH8Q9UKJ3 1502 aaKnown RBP20.53■□□□□ 0.88
CTPS2-201ENST00000359276 RBM42Q9BTD8 480 aaKnown RBP20.52■□□□□ 0.87
CTPS2-201ENST00000359276 RUNDC1Q96C34 613 aa20.51■□□□□ 0.87
CTPS2-201ENST00000359276 IQGAP2Q13576 1575 aa20.51■□□□□ 0.87
CTPS2-201ENST00000359276 URB2Q14146 1524 aaKnown RBP20.51■□□□□ 0.87
CTPS2-201ENST00000359276 COL17A1Q9UMD9 1497 aaPredicted RBP20.51■□□□□ 0.87
CTPS2-201ENST00000359276 ISY1Q9ULR0 285 aaKnown RBP20.51■□□□□ 0.87
CTPS2-201ENST00000359276 UQCRHLA0A096LP55 91 aa20.49■□□□□ 0.87
CTPS2-201ENST00000359276 UQCRHP07919 91 aa20.49■□□□□ 0.87
CTPS2-201ENST00000359276 RNF214Q8ND24 703 aa20.49■□□□□ 0.87
CTPS2-201ENST00000359276 NUP153P49790 1475 aaKnown RBP20.49■□□□□ 0.87
CTPS2-201ENST00000359276 PLEKHG5O94827 1062 aa20.48■□□□□ 0.87
CTPS2-201ENST00000359276 ARHGEF12Q9NZN5 1544 aa20.48■□□□□ 0.87
CTPS2-201ENST00000359276 APBB1O00213 710 aa20.47■□□□□ 0.87
CTPS2-201ENST00000359276 WDR62O43379 1518 aa20.47■□□□□ 0.87
CTPS2-201ENST00000359276 EXOSC9Q06265 439 aaKnown RBP20.47■□□□□ 0.87
CTPS2-201ENST00000359276 ZHX1Q9UKY1 873 aaPredicted RBP20.47■□□□□ 0.87
CTPS2-201ENST00000359276 FOXD4L6Q3SYB3 417 aaPredicted RBP20.47■□□□□ 0.87
CTPS2-201ENST00000359276 FOXD4L3Q6VB84 417 aaPredicted RBP20.47■□□□□ 0.87
CTPS2-201ENST00000359276 PLB1Q6P1J6 1458 aa20.46■□□□□ 0.87
CTPS2-201ENST00000359276 MTHFSP49914 203 aa20.46■□□□□ 0.87
CTPS2-201ENST00000359276 MAGI2Q86UL8 1455 aa20.46■□□□□ 0.87
CTPS2-201ENST00000359276 LAMC3Q9Y6N6 1575 aa20.46■□□□□ 0.87
CTPS2-201ENST00000359276 PLCB2Q00722 1185 aa20.45■□□□□ 0.86
CTPS2-201ENST00000359276 C1orf115Q9H7X2 142 aa20.45■□□□□ 0.86
CTPS2-201ENST00000359276 DDX19BQ9UMR2 479 aa20.45■□□□□ 0.86
CTPS2-201ENST00000359276 PTMSP20962 102 aa20.44■□□□□ 0.86
CTPS2-201ENST00000359276 INSRP06213 1382 aa20.44■□□□□ 0.86
CTPS2-201ENST00000359276 CFAP70Q5T0N1 1121 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms