RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 PPP6R1Q9UPN7 881 aa16.68■□□□□ 0.26
SYN3-202ENST00000358763 ERVK-7P63135 1459 aa16.68■□□□□ 0.26
SYN3-202ENST00000358763 ANP32CO43423 234 aa16.67■□□□□ 0.26
SYN3-202ENST00000358763 PPLO60437 1756 aa16.66■□□□□ 0.26
SYN3-202ENST00000358763 CFAP70Q5T0N1 1121 aa16.66■□□□□ 0.26
SYN3-202ENST00000358763 NUTM2DQ5VT03 806 aaPredicted RBP16.66■□□□□ 0.26
SYN3-202ENST00000358763 ESF1Q9H501 851 aaKnown RBP16.66■□□□□ 0.26
SYN3-202ENST00000358763 SLC52A1Q9NWF4 448 aa16.65■□□□□ 0.26
SYN3-202ENST00000358763 MYO5BQ9ULV0 1848 aa16.64■□□□□ 0.25
SYN3-202ENST00000358763 NRXN1Q9ULB1 1477 aa16.63■□□□□ 0.25
SYN3-202ENST00000358763 IQGAP1P46940 1657 aa16.63■□□□□ 0.25
SYN3-202ENST00000358763 KIAA1210Q9ULL0 1709 aa16.63■□□□□ 0.25
SYN3-202ENST00000358763 NEXMIFQ5QGS0 1516 aa16.62■□□□□ 0.25
SYN3-202ENST00000358763 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
SYN3-202ENST00000358763 RPGRIP1LQ68CZ1 1315 aa16.61■□□□□ 0.25
SYN3-202ENST00000358763 TMEM131LA2VDJ0 1609 aa16.61■□□□□ 0.25
SYN3-202ENST00000358763 ZMYM3Q14202 1370 aa16.6■□□□□ 0.25
SYN3-202ENST00000358763 SCAF11Q99590 1463 aaKnown RBP16.6■□□□□ 0.25
SYN3-202ENST00000358763 SPATA31D1Q6ZQQ2 1576 aa16.6■□□□□ 0.25
SYN3-202ENST00000358763 TESK2Q96S53 571 aa16.6■□□□□ 0.25
SYN3-202ENST00000358763 PIK3C2GO75747 1445 aa16.6■□□□□ 0.25
SYN3-202ENST00000358763 DISP3Q9P2K9 1392 aa16.59■□□□□ 0.25
SYN3-202ENST00000358763 STAG3Q9UJ98 1225 aa16.59■□□□□ 0.25
SYN3-202ENST00000358763 VGFO15240 615 aaPredicted RBP16.56■□□□□ 0.24
SYN3-202ENST00000358763 CNGB1Q14028 1251 aaPredicted RBP16.55■□□□□ 0.24
SYN3-202ENST00000358763 TMEM132EQ6IEE7 984 aa16.54■□□□□ 0.24
SYN3-202ENST00000358763 C14orf93Q9H972 538 aaKnown RBP16.54■□□□□ 0.24
SYN3-202ENST00000358763 EIF3AQ14152 1382 aaKnown RBP16.54■□□□□ 0.24
SYN3-202ENST00000358763 TMF1P82094 1093 aa16.54■□□□□ 0.24
SYN3-202ENST00000358763 PLPPR3Q6T4P5 718 aa16.53■□□□□ 0.24
SYN3-202ENST00000358763 CCER2I3L3R5 266 aa16.53■□□□□ 0.24
SYN3-202ENST00000358763 CENPBP07199 599 aaPredicted RBP16.53■□□□□ 0.24
SYN3-202ENST00000358763 SETBP1Q9Y6X0 1596 aa16.52■□□□□ 0.24
SYN3-202ENST00000358763 A2ML1A8K2U0 1454 aa16.52■□□□□ 0.24
SYN3-202ENST00000358763 CEBPAP49715 358 aaPredicted RBP16.52■□□□□ 0.24
SYN3-202ENST00000358763 ADGRB1O14514 1584 aa16.52■□□□□ 0.23
SYN3-202ENST00000358763 TRAK1Q9UPV9 953 aa16.51■□□□□ 0.23
SYN3-202ENST00000358763 TNRQ92752 1358 aa16.51■□□□□ 0.23
SYN3-202ENST00000358763 PRKRIP1Q9H875 184 aaPredicted RBP16.51■□□□□ 0.23
SYN3-202ENST00000358763 ZFYVE9O95405 1425 aa16.5■□□□□ 0.23
SYN3-202ENST00000358763 FER1L4A9Z1Z3 1794 aa16.49■□□□□ 0.23
SYN3-202ENST00000358763 RIMS2Q9UQ26 1411 aa16.47■□□□□ 0.23
SYN3-202ENST00000358763 C3P01024 1663 aa16.46■□□□□ 0.23
SYN3-202ENST00000358763 ASXL1Q8IXJ9 1541 aa16.46■□□□□ 0.23
SYN3-202ENST00000358763 CENPJQ9HC77 1338 aaPredicted RBP16.45■□□□□ 0.22
SYN3-202ENST00000358763 MYO3AQ8NEV4 1616 aa16.45■□□□□ 0.22
SYN3-202ENST00000358763 CCDC184Q52MB2 194 aa16.45■□□□□ 0.22
SYN3-202ENST00000358763 STK26Q9P289 416 aa16.44■□□□□ 0.22
SYN3-202ENST00000358763 QRICH2Q9H0J4 1663 aa16.43■□□□□ 0.22
SYN3-202ENST00000358763 PANK3Q9H999 370 aa16.42■□□□□ 0.22
SYN3-202ENST00000358763 ALKQ9UM73 1620 aa16.42■□□□□ 0.22
SYN3-202ENST00000358763 UBR1Q8IWV7 1749 aa16.42■□□□□ 0.22
SYN3-202ENST00000358763 ARHGEF28Q8N1W1 1705 aaKnown RBP16.42■□□□□ 0.22
SYN3-202ENST00000358763 CDCA8Q53HL2 280 aa16.41■□□□□ 0.22
SYN3-202ENST00000358763 KDM5AP29375 1690 aaKnown RBP16.41■□□□□ 0.22
SYN3-202ENST00000358763 SAFB2Q14151 953 aaKnown RBP eCLIP16.4■□□□□ 0.22
SYN3-202ENST00000358763 SBNO2Q9Y2G9 1366 aa16.4■□□□□ 0.22
SYN3-202ENST00000358763 MRS2Q9HD23 443 aa16.39■□□□□ 0.21
SYN3-202ENST00000358763 MYOM1P52179 1685 aa16.39■□□□□ 0.21
SYN3-202ENST00000358763 NLRP1Q9C000 1473 aa16.39■□□□□ 0.21
SYN3-202ENST00000358763 RIMS1Q86UR5 1692 aaKnown RBP16.38■□□□□ 0.21
SYN3-202ENST00000358763 PTPRMP28827 1452 aa16.38■□□□□ 0.21
SYN3-202ENST00000358763 PER1O15534 1290 aaPredicted RBP16.38■□□□□ 0.21
SYN3-202ENST00000358763 YTHDC2Q9H6S0 1430 aaKnown RBP16.38■□□□□ 0.21
SYN3-202ENST00000358763 TMEM2Q9UHN6 1383 aa16.37■□□□□ 0.21
SYN3-202ENST00000358763 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.37■□□□□ 0.21
SYN3-202ENST00000358763 NRXN3Q9Y4C0 1643 aa16.36■□□□□ 0.21
SYN3-202ENST00000358763 SLC24A1O60721 1099 aa16.36■□□□□ 0.21
SYN3-202ENST00000358763 BCANQ96GW7 911 aa16.36■□□□□ 0.21
SYN3-202ENST00000358763 SETD1AO15047 1707 aaKnown RBP16.35■□□□□ 0.21
SYN3-202ENST00000358763 CC2D1BQ5T0F9 858 aaKnown RBP16.35■□□□□ 0.21
SYN3-202ENST00000358763 KTN1Q86UP2 1357 aaKnown RBP16.34■□□□□ 0.21
SYN3-202ENST00000358763 PRAM1Q96QH2 718 aa16.34■□□□□ 0.21
SYN3-202ENST00000358763 FAM9BQ8IZU0 186 aa16.33■□□□□ 0.21
SYN3-202ENST00000358763 HDGFP51858 240 aaKnown RBP16.33■□□□□ 0.2
SYN3-202ENST00000358763 TULP4Q9NRJ4 1543 aa16.33■□□□□ 0.2
SYN3-202ENST00000358763 LTKP29376 864 aa16.32■□□□□ 0.2
SYN3-202ENST00000358763 POGKQ9P215 609 aa16.32■□□□□ 0.2
SYN3-202ENST00000358763 METP08581 1390 aa16.31■□□□□ 0.2
SYN3-202ENST00000358763 MINK1Q8N4C8 1332 aaPredicted RBP16.31■□□□□ 0.2
SYN3-202ENST00000358763 RALBP1Q15311 655 aa16.31■□□□□ 0.2
SYN3-202ENST00000358763 KNSTRNQ9Y448 316 aa16.31■□□□□ 0.2
SYN3-202ENST00000358763 PARD3Q8TEW0 1356 aa16.31■□□□□ 0.2
SYN3-202ENST00000358763 ADAMTSL3P82987 1691 aa16.3■□□□□ 0.2
SYN3-202ENST00000358763 TMC1Q8TDI8 760 aa16.3■□□□□ 0.2
SYN3-202ENST00000358763 EVC2Q86UK5 1308 aa16.3■□□□□ 0.2
SYN3-202ENST00000358763 MYBBP1AQ9BQG0 1328 aaKnown RBP16.3■□□□□ 0.2
SYN3-202ENST00000358763 TXNDC2Q86VQ3 553 aa16.3■□□□□ 0.2
SYN3-202ENST00000358763 CABP2Q9NPB3 220 aa16.29■□□□□ 0.2
SYN3-202ENST00000358763 LRPPRCP42704 1394 aaKnown RBP16.29■□□□□ 0.2
SYN3-202ENST00000358763 WAPLQ7Z5K2 1190 aa16.28■□□□□ 0.2
SYN3-202ENST00000358763 HNRNPUQ00839 825 aaKnown RBP eCLIP16.28■□□□□ 0.2
SYN3-202ENST00000358763 SLC12A5Q9H2X9 1139 aa16.28■□□□□ 0.2
SYN3-202ENST00000358763 PLEKHH1Q9ULM0 1364 aa16.28■□□□□ 0.2
SYN3-202ENST00000358763 EID1Q9Y6B2 187 aa16.27■□□□□ 0.2
SYN3-202ENST00000358763 ADAMTS13Q76LX8 1427 aa16.27■□□□□ 0.19
SYN3-202ENST00000358763 PLEKHG1Q9ULL1 1385 aa16.26■□□□□ 0.19
SYN3-202ENST00000358763 CEP170BQ9Y4F5 1589 aaPredicted RBP16.26■□□□□ 0.19
SYN3-202ENST00000358763 SRPK2P78362 688 aaKnown RBP16.26■□□□□ 0.19
SYN3-202ENST00000358763 AMER1Q5JTC6 1135 aaPredicted RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms