RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 MYT1LQ9UL68 1186 aa11.39□□□□□ -0.59
RFX3-202ENST00000358730 VWDEQ8N2E2 1590 aa11.39□□□□□ -0.59
RFX3-202ENST00000358730 EIF3AQ14152 1382 aaKnown RBP11.39□□□□□ -0.59
RFX3-202ENST00000358730 STAC3Q96MF2 364 aa11.38□□□□□ -0.59
RFX3-202ENST00000358730 ADGRL1O94910 1474 aa11.38□□□□□ -0.59
RFX3-202ENST00000358730 PPP2R1AP30153 589 aa11.38□□□□□ -0.59
RFX3-202ENST00000358730 KIAA1210Q9ULL0 1709 aa11.38□□□□□ -0.59
RFX3-202ENST00000358730 ASXL1Q8IXJ9 1541 aa11.38□□□□□ -0.59
RFX3-202ENST00000358730 KDM5AP29375 1690 aaKnown RBP11.38□□□□□ -0.59
RFX3-202ENST00000358730 KIF3BO15066 747 aa11.37□□□□□ -0.59
RFX3-202ENST00000358730 WDR43Q15061 677 aaKnown RBP eCLIP11.37□□□□□ -0.59
RFX3-202ENST00000358730 AMER1Q5JTC6 1135 aaPredicted RBP11.37□□□□□ -0.59
RFX3-202ENST00000358730 ADAMTS8Q9UP79 889 aa11.37□□□□□ -0.59
RFX3-202ENST00000358730 PLIN1O60240 522 aa11.37□□□□□ -0.59
RFX3-202ENST00000358730 MROH1Q8NDA8 1641 aa11.37□□□□□ -0.59
RFX3-202ENST00000358730 UGGT1Q9NYU2 1555 aa11.37□□□□□ -0.59
RFX3-202ENST00000358730 ABCA6Q8N139 1617 aa11.36□□□□□ -0.59
RFX3-202ENST00000358730 MAP3K4Q9Y6R4 1608 aa11.36□□□□□ -0.59
RFX3-202ENST00000358730 KIF1BO60333 1816 aa11.35□□□□□ -0.59
RFX3-202ENST00000358730 NEURL4Q96JN8 1562 aa11.35□□□□□ -0.59
RFX3-202ENST00000358730 PAK3O75914 559 aaPredicted RBP11.35□□□□□ -0.59
RFX3-202ENST00000358730 EFCAB6Q5THR3 1501 aa11.34□□□□□ -0.59
RFX3-202ENST00000358730 TCERG1O14776 1098 aaKnown RBP11.34□□□□□ -0.59
RFX3-202ENST00000358730 IPO9Q96P70 1041 aaKnown RBP11.34□□□□□ -0.59
RFX3-202ENST00000358730 MYOM2P54296 1465 aa11.34□□□□□ -0.59
RFX3-202ENST00000358730 PIK3C2GO75747 1445 aa11.34□□□□□ -0.59
RFX3-202ENST00000358730 PLEKHH1Q9ULM0 1364 aa11.34□□□□□ -0.59
RFX3-202ENST00000358730 CRBNQ96SW2 442 aa11.34□□□□□ -0.59
RFX3-202ENST00000358730 MROH2AA6NES4 1674 aa11.33□□□□□ -0.6
RFX3-202ENST00000358730 IFT172Q9UG01 1749 aa11.33□□□□□ -0.6
RFX3-202ENST00000358730 PPRC1Q5VV67 1664 aaKnown RBP11.32□□□□□ -0.6
RFX3-202ENST00000358730 CFAP70Q5T0N1 1121 aa11.32□□□□□ -0.6
RFX3-202ENST00000358730 KIDINS220Q9ULH0 1771 aa11.32□□□□□ -0.6
RFX3-202ENST00000358730 NPC1L1Q9UHC9 1359 aa11.32□□□□□ -0.6
RFX3-202ENST00000358730 ASXL2Q76L83 1435 aa11.32□□□□□ -0.6
RFX3-202ENST00000358730 ERVK-7P63135 1459 aa11.31□□□□□ -0.6
RFX3-202ENST00000358730 ADGRF5Q8IZF2 1346 aa11.31□□□□□ -0.6
RFX3-202ENST00000358730 NBR1Q14596 966 aa11.3□□□□□ -0.6
RFX3-202ENST00000358730 DUSP27Q5VZP5 1158 aa11.3□□□□□ -0.6
RFX3-202ENST00000358730 NPM2Q86SE8 214 aaKnown RBP11.3□□□□□ -0.6
RFX3-202ENST00000358730 ZBTB47Q9UFB7 747 aaPredicted RBP11.3□□□□□ -0.6
RFX3-202ENST00000358730 ZNF521Q96K83 1311 aa11.3□□□□□ -0.6
RFX3-202ENST00000358730 MS4A1P11836 297 aa11.29□□□□□ -0.6
RFX3-202ENST00000358730 PDE4AP27815 886 aa11.29□□□□□ -0.6
RFX3-202ENST00000358730 GOLGA2Q08379 1002 aa11.29□□□□□ -0.6
RFX3-202ENST00000358730 C20orf194Q5TEA3 1177 aa11.29□□□□□ -0.6
RFX3-202ENST00000358730 MYO3AQ8NEV4 1616 aa11.29□□□□□ -0.6
RFX3-202ENST00000358730 ZNF518AQ6AHZ1 1483 aa11.29□□□□□ -0.6
RFX3-202ENST00000358730 SLC24A1O60721 1099 aa11.28□□□□□ -0.6
RFX3-202ENST00000358730 CCDC146Q8IYE0 955 aa11.28□□□□□ -0.6
RFX3-202ENST00000358730 BCL11AQ9H165 835 aa11.28□□□□□ -0.6
RFX3-202ENST00000358730 ADGRB3O60242 1522 aa11.28□□□□□ -0.6
RFX3-202ENST00000358730 LMTK2Q8IWU2 1503 aa11.28□□□□□ -0.6
RFX3-202ENST00000358730 NRXN1Q9ULB1 1477 aa11.27□□□□□ -0.6
RFX3-202ENST00000358730 BACH2Q9BYV9 841 aa11.27□□□□□ -0.61
RFX3-202ENST00000358730 NOS1P29475 1434 aa11.27□□□□□ -0.61
RFX3-202ENST00000358730 CFAP65Q6ZU64 1925 aaKnown RBP11.26□□□□□ -0.61
RFX3-202ENST00000358730 SKAP1Q86WV1 359 aa11.26□□□□□ -0.61
RFX3-202ENST00000358730 CHGAP10645 457 aaKnown RBP11.26□□□□□ -0.61
RFX3-202ENST00000358730 SETBP1Q9Y6X0 1596 aa11.25□□□□□ -0.61
RFX3-202ENST00000358730 SBNO2Q9Y2G9 1366 aa11.25□□□□□ -0.61
RFX3-202ENST00000358730 APAF1O14727 1248 aa11.25□□□□□ -0.61
RFX3-202ENST00000358730 SLFN5Q08AF3 891 aa11.25□□□□□ -0.61
RFX3-202ENST00000358730 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.25□□□□□ -0.61
RFX3-202ENST00000358730 CARD14Q9BXL6 1004 aa11.25□□□□□ -0.61
RFX3-202ENST00000358730 PPLO60437 1756 aa11.24□□□□□ -0.61
RFX3-202ENST00000358730 CENPJQ9HC77 1338 aaPredicted RBP11.24□□□□□ -0.61
RFX3-202ENST00000358730 QRICH2Q9H0J4 1663 aa11.24□□□□□ -0.61
RFX3-202ENST00000358730 CFAP74Q9C0B2 1584 aa11.24□□□□□ -0.61
RFX3-202ENST00000358730 NKTRP30414 1462 aaKnown RBP11.24□□□□□ -0.61
RFX3-202ENST00000358730 NPATQ14207 1427 aa11.24□□□□□ -0.61
RFX3-202ENST00000358730 ZC3H13Q5T200 1668 aaKnown RBP11.24□□□□□ -0.61
RFX3-202ENST00000358730 KDM2BQ8NHM5 1336 aa11.23□□□□□ -0.61
RFX3-202ENST00000358730 POGZQ7Z3K3 1410 aa11.23□□□□□ -0.61
RFX3-202ENST00000358730 FRMPD1Q5SYB0 1578 aa11.23□□□□□ -0.61
RFX3-202ENST00000358730 DEKP35659 375 aaKnown RBP11.23□□□□□ -0.61
RFX3-202ENST00000358730 HECW2Q9P2P5 1572 aa11.23□□□□□ -0.61
RFX3-202ENST00000358730 CENPQQ7L2Z9 268 aaPredicted RBP11.22□□□□□ -0.61
RFX3-202ENST00000358730 NSD3Q9BZ95 1437 aa11.22□□□□□ -0.61
RFX3-202ENST00000358730 SPINK5Q9NQ38 1064 aaPredicted RBP11.22□□□□□ -0.61
RFX3-202ENST00000358730 TRAK1Q9UPV9 953 aa11.22□□□□□ -0.61
RFX3-202ENST00000358730 RTL5Q5HYW3 569 aaPredicted RBP11.22□□□□□ -0.61
RFX3-202ENST00000358730 GGT6Q6P531 493 aa11.22□□□□□ -0.61
RFX3-202ENST00000358730 TRMT2AQ8IZ69 625 aaKnown RBP11.21□□□□□ -0.61
RFX3-202ENST00000358730 E9PSI1 815 aa11.21□□□□□ -0.62
RFX3-202ENST00000358730 NPM1P06748 294 aaKnown RBP eCLIP11.21□□□□□ -0.62
RFX3-202ENST00000358730 CD109Q6YHK3 1445 aa11.2□□□□□ -0.62
RFX3-202ENST00000358730 POLR3AO14802 1390 aaPredicted RBP11.2□□□□□ -0.62
RFX3-202ENST00000358730 ADGRB1O14514 1584 aa11.2□□□□□ -0.62
RFX3-202ENST00000358730 MLH3Q9UHC1 1453 aa11.2□□□□□ -0.62
RFX3-202ENST00000358730 SHPRHQ149N8 1683 aa11.2□□□□□ -0.62
RFX3-202ENST00000358730 ABCC3O15438 1527 aa11.19□□□□□ -0.62
RFX3-202ENST00000358730 CAMSAP1Q5T5Y3 1602 aa11.19□□□□□ -0.62
RFX3-202ENST00000358730 TNNT2P45379 298 aaPredicted RBP11.19□□□□□ -0.62
RFX3-202ENST00000358730 MORC1Q86VD1 984 aa11.19□□□□□ -0.62
RFX3-202ENST00000358730 C14orf93Q9H972 538 aaKnown RBP11.19□□□□□ -0.62
RFX3-202ENST00000358730 DMRT2Q9Y5R5 561 aa11.19□□□□□ -0.62
RFX3-202ENST00000358730 BCAR3O75815 825 aa11.18□□□□□ -0.62
RFX3-202ENST00000358730 TMEM132EQ6IEE7 984 aa11.18□□□□□ -0.62
RFX3-202ENST00000358730 NGEFQ8N5V2 710 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms