RNA–Protein interactions for RNA: ENST00000358552.7

NFIX-201, Transcript of nuclear factor I X, humanhuman

TSL 5 BASIC

Gene NFIX, Length 1,727 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-201ENST00000358552 C3P01024 1663 aa18.43■□□□□ 0.54
NFIX-201ENST00000358552 PIK3C2BO00750 1634 aa18.42■□□□□ 0.54
NFIX-201ENST00000358552 ERVK-7P63135 1459 aa18.42■□□□□ 0.54
NFIX-201ENST00000358552 VGFO15240 615 aaPredicted RBP18.42■□□□□ 0.54
NFIX-201ENST00000358552 MADDQ8WXG6 1647 aa18.42■□□□□ 0.54
NFIX-201ENST00000358552 SPATA31D1Q6ZQQ2 1576 aa18.42■□□□□ 0.54
NFIX-201ENST00000358552 CCER2I3L3R5 266 aa18.41■□□□□ 0.54
NFIX-201ENST00000358552 EIF3AQ14152 1382 aaKnown RBP18.41■□□□□ 0.54
NFIX-201ENST00000358552 NRXN1Q9ULB1 1477 aa18.41■□□□□ 0.54
NFIX-201ENST00000358552 UGGT1Q9NYU2 1555 aa18.41■□□□□ 0.54
NFIX-201ENST00000358552 FBXO31Q5XUX0 539 aaPredicted RBP18.4■□□□□ 0.54
NFIX-201ENST00000358552 KIF7Q2M1P5 1343 aa18.4■□□□□ 0.54
NFIX-201ENST00000358552 ST20-MTHFSA0A0A6YYL1 179 aa18.4■□□□□ 0.54
NFIX-201ENST00000358552 RIMS1Q86UR5 1692 aaKnown RBP18.39■□□□□ 0.53
NFIX-201ENST00000358552 ZFYVE9O95405 1425 aa18.39■□□□□ 0.53
NFIX-201ENST00000358552 CHGAP10645 457 aaKnown RBP18.38■□□□□ 0.53
NFIX-201ENST00000358552 NBPF1Q3BBV0 1214 aa18.38■□□□□ 0.53
NFIX-201ENST00000358552 IDI1Q13907 227 aa18.37■□□□□ 0.53
NFIX-201ENST00000358552 CDCA8Q53HL2 280 aa18.37■□□□□ 0.53
NFIX-201ENST00000358552 SCAF11Q99590 1463 aaKnown RBP18.37■□□□□ 0.53
NFIX-201ENST00000358552 IFT172Q9UG01 1749 aa18.37■□□□□ 0.53
NFIX-201ENST00000358552 SETD1BQ9UPS6 1966 aaKnown RBP18.35■□□□□ 0.53
NFIX-201ENST00000358552 C11orf95C9JLR9 678 aaPredicted RBP18.35■□□□□ 0.53
NFIX-201ENST00000358552 TMF1P82094 1093 aa18.35■□□□□ 0.53
NFIX-201ENST00000358552 MYO5BQ9ULV0 1848 aa18.34■□□□□ 0.53
NFIX-201ENST00000358552 SETBP1Q9Y6X0 1596 aa18.33■□□□□ 0.53
NFIX-201ENST00000358552 HDGFP51858 240 aaKnown RBP18.33■□□□□ 0.52
NFIX-201ENST00000358552 C14orf93Q9H972 538 aaKnown RBP18.33■□□□□ 0.52
NFIX-201ENST00000358552 CEBPAP49715 358 aaPredicted RBP18.32■□□□□ 0.52
NFIX-201ENST00000358552 PPLO60437 1756 aa18.32■□□□□ 0.52
NFIX-201ENST00000358552 ADGRF5Q8IZF2 1346 aa18.31■□□□□ 0.52
NFIX-201ENST00000358552 TNRQ92752 1358 aa18.31■□□□□ 0.52
NFIX-201ENST00000358552 PIK3C2GO75747 1445 aa18.31■□□□□ 0.52
NFIX-201ENST00000358552 TMEM131LA2VDJ0 1609 aa18.31■□□□□ 0.52
NFIX-201ENST00000358552 STAG3Q9UJ98 1225 aa18.31■□□□□ 0.52
NFIX-201ENST00000358552 KDM5AP29375 1690 aaKnown RBP18.29■□□□□ 0.52
NFIX-201ENST00000358552 TESK2Q96S53 571 aa18.29■□□□□ 0.52
NFIX-201ENST00000358552 IQGAP1P46940 1657 aa18.28■□□□□ 0.52
NFIX-201ENST00000358552 KTN1Q86UP2 1357 aaKnown RBP18.28■□□□□ 0.52
NFIX-201ENST00000358552 NEXMIFQ5QGS0 1516 aa18.27■□□□□ 0.52
NFIX-201ENST00000358552 CFAP70Q5T0N1 1121 aa18.27■□□□□ 0.52
NFIX-201ENST00000358552 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.27■□□□□ 0.52
NFIX-201ENST00000358552 NLRP1Q9C000 1473 aa18.27■□□□□ 0.51
NFIX-201ENST00000358552 SBNO2Q9Y2G9 1366 aa18.27■□□□□ 0.51
NFIX-201ENST00000358552 PTPRMP28827 1452 aa18.25■□□□□ 0.51
NFIX-201ENST00000358552 YTHDC1Q96MU7 727 aaKnown RBP18.25■□□□□ 0.51
NFIX-201ENST00000358552 UBR1Q8IWV7 1749 aa18.25■□□□□ 0.51
NFIX-201ENST00000358552 PLPPR3Q6T4P5 718 aa18.23■□□□□ 0.51
NFIX-201ENST00000358552 A2ML1A8K2U0 1454 aa18.22■□□□□ 0.51
NFIX-201ENST00000358552 MYO3AQ8NEV4 1616 aa18.22■□□□□ 0.51
NFIX-201ENST00000358552 PRKRIP1Q9H875 184 aaPredicted RBP18.22■□□□□ 0.51
NFIX-201ENST00000358552 PUS7Q96PZ0 661 aaKnown RBP18.21■□□□□ 0.51
NFIX-201ENST00000358552 POLR3GLQ9BT43 218 aa18.2■□□□□ 0.5
NFIX-201ENST00000358552 KDM4FA0A1W2PPD8 638 aa18.18■□□□□ 0.5
NFIX-201ENST00000358552 CENPJQ9HC77 1338 aaPredicted RBP18.18■□□□□ 0.5
NFIX-201ENST00000358552 ADGRB1O14514 1584 aa18.18■□□□□ 0.5
NFIX-201ENST00000358552 RALBP1Q15311 655 aa18.18■□□□□ 0.5
NFIX-201ENST00000358552 ZNF142P52746 1687 aaPredicted RBP18.17■□□□□ 0.5
NFIX-201ENST00000358552 CEP170BQ9Y4F5 1589 aaPredicted RBP18.16■□□□□ 0.5
NFIX-201ENST00000358552 RIMS2Q9UQ26 1411 aa18.15■□□□□ 0.5
NFIX-201ENST00000358552 DISP3Q9P2K9 1392 aa18.15■□□□□ 0.5
NFIX-201ENST00000358552 THEMISQ8N1K5 641 aaPredicted RBP18.13■□□□□ 0.49
NFIX-201ENST00000358552 TMEM2Q9UHN6 1383 aa18.13■□□□□ 0.49
NFIX-201ENST00000358552 SLIT1O75093 1534 aa18.11■□□□□ 0.49
NFIX-201ENST00000358552 NUTM2DQ5VT03 806 aaPredicted RBP18.1■□□□□ 0.49
NFIX-201ENST00000358552 TRAK1Q9UPV9 953 aa18.1■□□□□ 0.49
NFIX-201ENST00000358552 PER1O15534 1290 aaPredicted RBP18.09■□□□□ 0.49
NFIX-201ENST00000358552 ARHGAP23Q9P227 1491 aa18.09■□□□□ 0.49
NFIX-201ENST00000358552 EVC2Q86UK5 1308 aa18.08■□□□□ 0.48
NFIX-201ENST00000358552 TMEM132EQ6IEE7 984 aa18.08■□□□□ 0.48
NFIX-201ENST00000358552 SIRT1Q96EB6 747 aa18.08■□□□□ 0.48
NFIX-201ENST00000358552 ALKQ9UM73 1620 aa18.08■□□□□ 0.48
NFIX-201ENST00000358552 PANK3Q9H999 370 aa18.07■□□□□ 0.48
NFIX-201ENST00000358552 EID1Q9Y6B2 187 aa18.07■□□□□ 0.48
NFIX-201ENST00000358552 NPC1L1Q9UHC9 1359 aa18.07■□□□□ 0.48
NFIX-201ENST00000358552 KNSTRNQ9Y448 316 aa18.06■□□□□ 0.48
NFIX-201ENST00000358552 YTHDC2Q9H6S0 1430 aaKnown RBP18.06■□□□□ 0.48
NFIX-201ENST00000358552 NINLQ9Y2I6 1382 aa18.05■□□□□ 0.48
NFIX-201ENST00000358552 MYT1Q01538 1121 aa18.05■□□□□ 0.48
NFIX-201ENST00000358552 ABCC11Q96J66 1382 aa18.05■□□□□ 0.48
NFIX-201ENST00000358552 DLC1Q96QB1 1528 aa18.04■□□□□ 0.48
NFIX-201ENST00000358552 MYBBP1AQ9BQG0 1328 aaKnown RBP18.04■□□□□ 0.48
NFIX-201ENST00000358552 LTKP29376 864 aa18.04■□□□□ 0.48
NFIX-201ENST00000358552 TXNDC2Q86VQ3 553 aa18.04■□□□□ 0.48
NFIX-201ENST00000358552 LRPPRCP42704 1394 aaKnown RBP18.04■□□□□ 0.48
NFIX-201ENST00000358552 MRS2Q9HD23 443 aa18.03■□□□□ 0.48
NFIX-201ENST00000358552 BRD4O60885 1362 aaPredicted RBP18.03■□□□□ 0.48
NFIX-201ENST00000358552 NRXN3Q9Y4C0 1643 aa18.02■□□□□ 0.48
NFIX-201ENST00000358552 POGKQ9P215 609 aa18.02■□□□□ 0.48
NFIX-201ENST00000358552 PARD3Q8TEW0 1356 aa18.02■□□□□ 0.48
NFIX-201ENST00000358552 PLEKHG1Q9ULL1 1385 aa18.02■□□□□ 0.48
NFIX-201ENST00000358552 SETD1AO15047 1707 aaKnown RBP18.02■□□□□ 0.47
NFIX-201ENST00000358552 ARHGEF28Q8N1W1 1705 aaKnown RBP18.01■□□□□ 0.47
NFIX-201ENST00000358552 QRICH2Q9H0J4 1663 aa18.01■□□□□ 0.47
NFIX-201ENST00000358552 NLRP13Q86W25 1043 aa18.01■□□□□ 0.47
NFIX-201ENST00000358552 ANKLE2Q86XL3 938 aa17.99■□□□□ 0.47
NFIX-201ENST00000358552 TMC1Q8TDI8 760 aa17.99■□□□□ 0.47
NFIX-201ENST00000358552 ASXL1Q8IXJ9 1541 aa17.99■□□□□ 0.47
NFIX-201ENST00000358552 ATAD2Q6PL18 1390 aa17.98■□□□□ 0.47
NFIX-201ENST00000358552 FAM135BQ49AJ0 1406 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms