RNA–Protein interactions for RNA: ENST00000358184.6

CTSE-201, Transcript of cathepsin E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSE, Length 2,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSE-201ENST00000358184 FRAT1Q92837 279 aaPredicted RBP13.91□□□□□ -0.18
CTSE-201ENST00000358184 TSPOAP1O95153 1857 aa13.9□□□□□ -0.18
CTSE-201ENST00000358184 RAPGEF3O95398 923 aa13.9□□□□□ -0.18
CTSE-201ENST00000358184 PNNQ9H307 717 aaKnown RBP13.89□□□□□ -0.19
CTSE-201ENST00000358184 ARID4BQ4LE39 1312 aaPredicted RBP13.89□□□□□ -0.19
CTSE-201ENST00000358184 HECW2Q9P2P5 1572 aa13.89□□□□□ -0.19
CTSE-201ENST00000358184 RICTORQ6R327 1708 aa13.89□□□□□ -0.19
CTSE-201ENST00000358184 DCAF11Q8TEB1 546 aa13.88□□□□□ -0.19
CTSE-201ENST00000358184 KIDINS220Q9ULH0 1771 aa13.88□□□□□ -0.19
CTSE-201ENST00000358184 DHX29Q7Z478 1369 aaKnown RBP13.87□□□□□ -0.19
CTSE-201ENST00000358184 IRX6P78412 446 aaPredicted RBP13.87□□□□□ -0.19
CTSE-201ENST00000358184 LAS1LQ9Y4W2 734 aaKnown RBP13.87□□□□□ -0.19
CTSE-201ENST00000358184 ZMYM4Q5VZL5 1548 aa13.87□□□□□ -0.19
CTSE-201ENST00000358184 MAGI2Q86UL8 1455 aa13.87□□□□□ -0.19
CTSE-201ENST00000358184 RNF216Q9NWF9 866 aaPredicted RBP13.87□□□□□ -0.19
CTSE-201ENST00000358184 PHF23Q9BUL5 403 aaPredicted RBP13.86□□□□□ -0.19
CTSE-201ENST00000358184 FRMPD1Q5SYB0 1578 aa13.86□□□□□ -0.19
CTSE-201ENST00000358184 TRHP20396 242 aaPredicted RBP13.86□□□□□ -0.19
CTSE-201ENST00000358184 ZNF830Q96NB3 372 aaPredicted RBP13.86□□□□□ -0.19
CTSE-201ENST00000358184 FBXO3Q9UK99 471 aa13.86□□□□□ -0.19
CTSE-201ENST00000358184 KDM5DQ9BY66 1539 aa13.86□□□□□ -0.19
CTSE-201ENST00000358184 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.85□□□□□ -0.19
CTSE-201ENST00000358184 MPHOSPH9Q99550 1183 aa13.85□□□□□ -0.19
CTSE-201ENST00000358184 A2MP01023 1474 aa13.84□□□□□ -0.19
CTSE-201ENST00000358184 TMEM51Q9NW97 253 aa13.84□□□□□ -0.19
CTSE-201ENST00000358184 NUP155O75694 1391 aa13.84□□□□□ -0.19
CTSE-201ENST00000358184 CLCN1P35523 988 aa13.83□□□□□ -0.2
CTSE-201ENST00000358184 SMAP1Q8IYB5 467 aaPredicted RBP13.83□□□□□ -0.2
CTSE-201ENST00000358184 PZPP20742 1482 aa13.83□□□□□ -0.2
CTSE-201ENST00000358184 UNC13BO14795 1591 aa13.83□□□□□ -0.2
CTSE-201ENST00000358184 EIF2AK4Q9P2K8 1649 aaKnown RBP13.83□□□□□ -0.2
CTSE-201ENST00000358184 CDK11BP21127 795 aaKnown RBP13.82□□□□□ -0.2
CTSE-201ENST00000358184 COL17A1Q9UMD9 1497 aaPredicted RBP13.82□□□□□ -0.2
CTSE-201ENST00000358184 SLC4A1APQ9BWU0 796 aaKnown RBP13.82□□□□□ -0.2
CTSE-201ENST00000358184 ABCA6Q8N139 1617 aa13.81□□□□□ -0.2
CTSE-201ENST00000358184 PLCD3Q8N3E9 789 aa13.81□□□□□ -0.2
CTSE-201ENST00000358184 DIP2CQ9Y2E4 1556 aa13.81□□□□□ -0.2
CTSE-201ENST00000358184 VGFO15240 615 aaPredicted RBP13.8□□□□□ -0.2
CTSE-201ENST00000358184 AMER1Q5JTC6 1135 aaPredicted RBP13.79□□□□□ -0.2
CTSE-201ENST00000358184 YEATS2Q9ULM3 1422 aa13.79□□□□□ -0.2
CTSE-201ENST00000358184 TPM2P07951 284 aa13.79□□□□□ -0.2
CTSE-201ENST00000358184 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
CTSE-201ENST00000358184 DEPDC5O75140 1603 aa13.79□□□□□ -0.2
CTSE-201ENST00000358184 DDRGK1Q96HY6 314 aa13.78□□□□□ -0.2
CTSE-201ENST00000358184 FAM135AQ9P2D6 1515 aa13.78□□□□□ -0.2
CTSE-201ENST00000358184 BCORL1Q5H9F3 1711 aa13.78□□□□□ -0.2
CTSE-201ENST00000358184 KIF3BO15066 747 aa13.78□□□□□ -0.2
CTSE-201ENST00000358184 ATP10AO60312 1499 aa13.78□□□□□ -0.2
CTSE-201ENST00000358184 IQGAP3Q86VI3 1631 aa13.77□□□□□ -0.2
CTSE-201ENST00000358184 CNPY4Q8N129 248 aa13.77□□□□□ -0.21
CTSE-201ENST00000358184 REREQ9P2R6 1566 aa13.77□□□□□ -0.21
CTSE-201ENST00000358184 CNTLNQ9NXG0 1405 aa13.77□□□□□ -0.21
CTSE-201ENST00000358184 TAOK2Q9UL54 1235 aa13.76□□□□□ -0.21
CTSE-201ENST00000358184 KANK1Q14678 1352 aa13.76□□□□□ -0.21
CTSE-201ENST00000358184 HSPA5P11021 654 aaKnown RBP13.76□□□□□ -0.21
CTSE-201ENST00000358184 UTP14CQ5TAP6 766 aaKnown RBP13.76□□□□□ -0.21
CTSE-201ENST00000358184 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.76□□□□□ -0.21
CTSE-201ENST00000358184 PRDM15P57071 1507 aaPredicted RBP13.75□□□□□ -0.21
CTSE-201ENST00000358184 RNF17Q9BXT8 1623 aaKnown RBP13.75□□□□□ -0.21
CTSE-201ENST00000358184 PKD2Q13563 968 aa13.75□□□□□ -0.21
CTSE-201ENST00000358184 ANKRD30BQ9BXX2 1392 aa13.75□□□□□ -0.21
CTSE-201ENST00000358184 VWDEQ8N2E2 1590 aa13.74□□□□□ -0.21
CTSE-201ENST00000358184 NFKBIBQ15653 356 aa13.74□□□□□ -0.21
CTSE-201ENST00000358184 RGS22Q8NE09 1264 aa13.74□□□□□ -0.21
CTSE-201ENST00000358184 ARHGEF40Q8TER5 1519 aa13.74□□□□□ -0.21
CTSE-201ENST00000358184 MROH1Q8NDA8 1641 aa13.73□□□□□ -0.21
CTSE-201ENST00000358184 EIF4G2P78344 907 aaKnown RBP eCLIP13.73□□□□□ -0.21
CTSE-201ENST00000358184 AGLP35573 1532 aa13.73□□□□□ -0.21
CTSE-201ENST00000358184 KCNG1Q9UIX4 513 aa13.72□□□□□ -0.21
CTSE-201ENST00000358184 ZHX1Q9UKY1 873 aaPredicted RBP13.72□□□□□ -0.21
CTSE-201ENST00000358184 POLR1AO95602 1720 aaPredicted RBP13.71□□□□□ -0.21
CTSE-201ENST00000358184 LMTK2Q8IWU2 1503 aa13.71□□□□□ -0.21
CTSE-201ENST00000358184 B4GALNT3Q6L9W6 998 aa13.7□□□□□ -0.22
CTSE-201ENST00000358184 VGLL3A8MV65 326 aa13.7□□□□□ -0.22
CTSE-201ENST00000358184 MAP7D2Q96T17 732 aa13.7□□□□□ -0.22
CTSE-201ENST00000358184 PPP4R3BQ5MIZ7 849 aa13.69□□□□□ -0.22
CTSE-201ENST00000358184 PPP6R1Q9UPN7 881 aa13.69□□□□□ -0.22
CTSE-201ENST00000358184 CCDC7Q96M83 1385 aa13.69□□□□□ -0.22
CTSE-201ENST00000358184 GGT6Q6P531 493 aa13.68□□□□□ -0.22
CTSE-201ENST00000358184 TET3O43151 1660 aa13.68□□□□□ -0.22
CTSE-201ENST00000358184 RPRD2Q5VT52 1461 aaKnown RBP13.68□□□□□ -0.22
CTSE-201ENST00000358184 L3MBTL2Q969R5 705 aa13.67□□□□□ -0.22
CTSE-201ENST00000358184 DMTNQ08495 405 aa13.67□□□□□ -0.22
CTSE-201ENST00000358184 ZBED9Q6R2W3 1325 aa13.66□□□□□ -0.22
CTSE-201ENST00000358184 IRX3P78415 501 aaPredicted RBP13.66□□□□□ -0.22
CTSE-201ENST00000358184 WWC1Q8IX03 1113 aa13.66□□□□□ -0.22
CTSE-201ENST00000358184 PRKRIP1Q9H875 184 aaPredicted RBP13.66□□□□□ -0.22
CTSE-201ENST00000358184 ABCC3O15438 1527 aa13.65□□□□□ -0.22
CTSE-201ENST00000358184 EFCAB6Q5THR3 1501 aa13.65□□□□□ -0.22
CTSE-201ENST00000358184 PTPRTO14522 1441 aa13.64□□□□□ -0.23
CTSE-201ENST00000358184 PLA2R1Q13018 1463 aa13.64□□□□□ -0.23
CTSE-201ENST00000358184 ZC3H13Q5T200 1668 aaKnown RBP13.64□□□□□ -0.23
CTSE-201ENST00000358184 L1TD1Q5T7N2 865 aaKnown RBP13.64□□□□□ -0.23
CTSE-201ENST00000358184 E9PCH4 1651 aa13.64□□□□□ -0.23
CTSE-201ENST00000358184 MMP14P50281 582 aa13.63□□□□□ -0.23
CTSE-201ENST00000358184 CCDC184Q52MB2 194 aa13.63□□□□□ -0.23
CTSE-201ENST00000358184 CCDC144AA2RUR9 1427 aa13.62□□□□□ -0.23
CTSE-201ENST00000358184 ARHGAP31Q2M1Z3 1444 aa13.62□□□□□ -0.23
CTSE-201ENST00000358184 SPATA31E1Q6ZUB1 1445 aa13.61□□□□□ -0.23
CTSE-201ENST00000358184 ANP32BQ92688 251 aaKnown RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms