RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 TUBBP07437 444 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 PDS5BQ9NTI5 1447 aa5.05□□□□□ -1.6
SYNE2-204ENST00000358025 PDCP20941 246 aa5.04□□□□□ -1.6
SYNE2-204ENST00000358025 ZNF777Q9ULD5 760 aaPredicted RBP5.04□□□□□ -1.6
SYNE2-204ENST00000358025 RGS3P49796 1198 aa5.04□□□□□ -1.6
SYNE2-204ENST00000358025 KIF20AO95235 890 aa5.04□□□□□ -1.6
SYNE2-204ENST00000358025 PAK3O75914 559 aaPredicted RBP5.04□□□□□ -1.6
SYNE2-204ENST00000358025 RUNDC1Q96C34 613 aa5.04□□□□□ -1.6
SYNE2-204ENST00000358025 GCC1Q96CN9 775 aa5.04□□□□□ -1.6
SYNE2-204ENST00000358025 CHMP7Q8WUX9 453 aaPredicted RBP5.04□□□□□ -1.6
SYNE2-204ENST00000358025 CWC15Q9P013 229 aaKnown RBP5.04□□□□□ -1.6
SYNE2-204ENST00000358025 IL16Q14005 1332 aa5.04□□□□□ -1.6
SYNE2-204ENST00000358025 PLEKHH1Q9ULM0 1364 aa5.04□□□□□ -1.6
SYNE2-204ENST00000358025 INTS3Q68E01 1043 aaKnown RBP5.04□□□□□ -1.6
SYNE2-204ENST00000358025 CRBNQ96SW2 442 aa5.04□□□□□ -1.6
SYNE2-204ENST00000358025 CFTRP13569 1480 aa5.04□□□□□ -1.6
SYNE2-204ENST00000358025 MORC1Q86VD1 984 aa5.04□□□□□ -1.6
SYNE2-204ENST00000358025 GOLGA6L4A6NEF3 574 aa5.03□□□□□ -1.6
SYNE2-204ENST00000358025 EXOC6Q8TAG9 804 aa5.03□□□□□ -1.6
SYNE2-204ENST00000358025 SRCIN1Q9C0H9 1055 aa5.03□□□□□ -1.6
SYNE2-204ENST00000358025 WDR97A6NE52 1622 aa5.03□□□□□ -1.6
SYNE2-204ENST00000358025 EPB41L2O43491 1005 aaKnown RBP5.03□□□□□ -1.6
SYNE2-204ENST00000358025 ARAP1Q96P48 1450 aa5.03□□□□□ -1.6
SYNE2-204ENST00000358025 SMAP1Q8IYB5 467 aaPredicted RBP5.03□□□□□ -1.6
SYNE2-204ENST00000358025 NUP155O75694 1391 aa5.03□□□□□ -1.6
SYNE2-204ENST00000358025 API5Q9BZZ5 524 aaKnown RBP5.03□□□□□ -1.6
SYNE2-204ENST00000358025 NAIPQ13075 1403 aa5.03□□□□□ -1.6
SYNE2-204ENST00000358025 FEZ1Q99689 392 aa5.03□□□□□ -1.6
SYNE2-204ENST00000358025 C22orf23Q9BZE7 217 aa5.03□□□□□ -1.6
SYNE2-204ENST00000358025 DZIP1LQ8IYY4 767 aaKnown RBP5.03□□□□□ -1.6
SYNE2-204ENST00000358025 ABCC11Q96J66 1382 aa5.02□□□□□ -1.61
SYNE2-204ENST00000358025 CAMSAP2Q08AD1 1489 aa5.02□□□□□ -1.61
SYNE2-204ENST00000358025 CTAGE5O15320 804 aa5.02□□□□□ -1.61
SYNE2-204ENST00000358025 SLFN5Q08AF3 891 aa5.02□□□□□ -1.61
SYNE2-204ENST00000358025 HSP90AB4PQ58FF6 505 aa5.02□□□□□ -1.61
SYNE2-204ENST00000358025 PAXBP1Q9Y5B6 917 aa5.02□□□□□ -1.61
SYNE2-204ENST00000358025 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.02□□□□□ -1.61
SYNE2-204ENST00000358025 KIAA1107Q9UPP5 1409 aa5.02□□□□□ -1.61
SYNE2-204ENST00000358025 GPRASP1Q5JY77 1395 aa5.02□□□□□ -1.61
SYNE2-204ENST00000358025 NEMFO60524 1076 aa5.02□□□□□ -1.61
SYNE2-204ENST00000358025 RTN4Q9NQC3 1192 aaKnown RBP5.02□□□□□ -1.61
SYNE2-204ENST00000358025 CCDC27Q2M243 656 aa5.01□□□□□ -1.61
SYNE2-204ENST00000358025 ACBD3Q9H3P7 528 aa5.01□□□□□ -1.61
SYNE2-204ENST00000358025 HDAC1Q13547 482 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-204ENST00000358025 RUFY2Q8WXA3 655 aa5.01□□□□□ -1.61
SYNE2-204ENST00000358025 NAT10Q9H0A0 1025 aaKnown RBP5.01□□□□□ -1.61
SYNE2-204ENST00000358025 OFD1O75665 1012 aa5.01□□□□□ -1.61
SYNE2-204ENST00000358025 ANO8Q9HCE9 1232 aaPredicted RBP5.01□□□□□ -1.61
SYNE2-204ENST00000358025 TIAM1Q13009 1591 aa5.01□□□□□ -1.61
SYNE2-204ENST00000358025 ATAD2Q6PL18 1390 aa5.01□□□□□ -1.61
SYNE2-204ENST00000358025 SMC5Q8IY18 1101 aa5.01□□□□□ -1.61
SYNE2-204ENST00000358025 ALDH1L2Q3SY69 923 aa5.01□□□□□ -1.61
SYNE2-204ENST00000358025 EFCAB2Q5VUJ9 269 aa5□□□□□ -1.61
SYNE2-204ENST00000358025 GZF1Q9H116 711 aaPredicted RBP5□□□□□ -1.61
SYNE2-204ENST00000358025 CALCOCO1Q9P1Z2 691 aa5□□□□□ -1.61
SYNE2-204ENST00000358025 TUBB2AQ13885 445 aa5□□□□□ -1.61
SYNE2-204ENST00000358025 RGL3Q3MIN7 710 aa5□□□□□ -1.61
SYNE2-204ENST00000358025 TUBB2BQ9BVA1 445 aa5□□□□□ -1.61
SYNE2-204ENST00000358025 SMC4Q9NTJ3 1288 aa5□□□□□ -1.61
SYNE2-204ENST00000358025 A6NNZ2 444 aa5□□□□□ -1.61
SYNE2-204ENST00000358025 TUBB8Q3ZCM7 444 aa5□□□□□ -1.61
SYNE2-204ENST00000358025 CC2D1BQ5T0F9 858 aaKnown RBP5□□□□□ -1.61
SYNE2-204ENST00000358025 BMP2KLQ5H9B9 411 aa5□□□□□ -1.61
SYNE2-204ENST00000358025 ARGLU1Q9NWB6 273 aaPredicted RBP5□□□□□ -1.61
SYNE2-204ENST00000358025 RUSC2Q8N2Y8 1516 aa5□□□□□ -1.61
SYNE2-204ENST00000358025 LRRFIP1Q32MZ4 808 aaKnown RBP5□□□□□ -1.61
SYNE2-204ENST00000358025 SASS6Q6UVJ0 657 aa5□□□□□ -1.61
SYNE2-204ENST00000358025 SYNJ1O43426 1573 aa4.99□□□□□ -1.61
SYNE2-204ENST00000358025 HIP1O00291 1037 aa4.99□□□□□ -1.61
SYNE2-204ENST00000358025 DRC7Q8IY82 874 aa4.99□□□□□ -1.61
SYNE2-204ENST00000358025 ANKRD50Q9ULJ7 1429 aa4.99□□□□□ -1.61
SYNE2-204ENST00000358025 BRPF3Q9ULD4 1205 aa4.99□□□□□ -1.61
SYNE2-204ENST00000358025 LRPPRCP42704 1394 aaKnown RBP4.99□□□□□ -1.61
SYNE2-204ENST00000358025 HOOK1Q9UJC3 728 aaKnown RBP4.99□□□□□ -1.61
SYNE2-204ENST00000358025 IBTKQ9P2D0 1353 aaPredicted RBP4.99□□□□□ -1.61
SYNE2-204ENST00000358025 CLEC17AQ6ZS10 378 aa4.99□□□□□ -1.61
SYNE2-204ENST00000358025 V9GYY5 206 aaPredicted RBP4.99□□□□□ -1.61
SYNE2-204ENST00000358025 RPRD2Q5VT52 1461 aaKnown RBP4.99□□□□□ -1.61
SYNE2-204ENST00000358025 SETQ01105 290 aaPredicted RBP4.99□□□□□ -1.61
SYNE2-204ENST00000358025 INTS4Q96HW7 963 aaKnown RBP4.99□□□□□ -1.61
SYNE2-204ENST00000358025 ADAMTS8Q9UP79 889 aa4.99□□□□□ -1.61
SYNE2-204ENST00000358025 FSD2A1L4K1 749 aa4.99□□□□□ -1.61
SYNE2-204ENST00000358025 THOC2Q8NI27 1593 aaKnown RBP4.99□□□□□ -1.61
SYNE2-204ENST00000358025 EHBP1L1Q8N3D4 1523 aa4.99□□□□□ -1.61
SYNE2-204ENST00000358025 GOLGA6L19H0YKK7 550 aa4.99□□□□□ -1.61
SYNE2-204ENST00000358025 FAM13BQ9NYF5 915 aa4.99□□□□□ -1.61
SYNE2-204ENST00000358025 NOL10Q9BSC4 688 aaKnown RBP4.99□□□□□ -1.61
SYNE2-204ENST00000358025 ZMYND15Q9H091 742 aa4.99□□□□□ -1.61
SYNE2-204ENST00000358025 VGFO15240 615 aaPredicted RBP4.98□□□□□ -1.61
SYNE2-204ENST00000358025 KLHL40Q2TBA0 621 aa4.98□□□□□ -1.61
SYNE2-204ENST00000358025 CDC45O75419 566 aa4.98□□□□□ -1.61
SYNE2-204ENST00000358025 TSPY26PQ9H489 355 aa4.98□□□□□ -1.61
SYNE2-204ENST00000358025 FRAT2O75474 233 aaPredicted RBP4.98□□□□□ -1.61
SYNE2-204ENST00000358025 ARHGAP45Q92619 1136 aa4.98□□□□□ -1.61
SYNE2-204ENST00000358025 ANAPC15P60006 121 aa4.98□□□□□ -1.61
SYNE2-204ENST00000358025 ERCC4Q92889 916 aaPredicted RBP4.98□□□□□ -1.61
SYNE2-204ENST00000358025 HMGXB3Q12766 1538 aa4.98□□□□□ -1.61
SYNE2-204ENST00000358025 FHOD3Q2V2M9 1422 aa4.98□□□□□ -1.61
SYNE2-204ENST00000358025 DUSP27Q5VZP5 1158 aa4.98□□□□□ -1.61
SYNE2-204ENST00000358025 C14orf37Q86TY3 774 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms