RNA–Protein interactions for RNA: ENST00000357811.7

COL13A1-202, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-202ENST00000357811 DUSP27Q5VZP5 1158 aa26.89■■□□□ 1.89
COL13A1-202ENST00000357811 BACH2Q9BYV9 841 aa26.88■■□□□ 1.89
COL13A1-202ENST00000357811 SPINK5Q9NQ38 1064 aaPredicted RBP26.88■■□□□ 1.89
COL13A1-202ENST00000357811 CDCA8Q53HL2 280 aa26.87■■□□□ 1.89
COL13A1-202ENST00000357811 UGGT1Q9NYU2 1555 aa26.87■■□□□ 1.89
COL13A1-202ENST00000357811 GOLGA2Q08379 1002 aa26.87■■□□□ 1.89
COL13A1-202ENST00000357811 SCAF11Q99590 1463 aaKnown RBP26.85■■□□□ 1.89
COL13A1-202ENST00000357811 LAMC1P11047 1609 aa26.84■■□□□ 1.89
COL13A1-202ENST00000357811 MADDQ8WXG6 1647 aa26.84■■□□□ 1.89
COL13A1-202ENST00000357811 KANK1Q14678 1352 aa26.83■■□□□ 1.89
COL13A1-202ENST00000357811 NEUROD2Q15784 382 aa26.82■■□□□ 1.88
COL13A1-202ENST00000357811 NUTM2DQ5VT03 806 aaPredicted RBP26.82■■□□□ 1.88
COL13A1-202ENST00000357811 ZMYM4Q5VZL5 1548 aa26.82■■□□□ 1.88
COL13A1-202ENST00000357811 CLTCL1P53675 1640 aa26.82■■□□□ 1.88
COL13A1-202ENST00000357811 CARD14Q9BXL6 1004 aa26.82■■□□□ 1.88
COL13A1-202ENST00000357811 RTL5Q5HYW3 569 aaPredicted RBP26.81■■□□□ 1.88
COL13A1-202ENST00000357811 DMRT2Q9Y5R5 561 aa26.81■■□□□ 1.88
COL13A1-202ENST00000357811 TRAK1Q9UPV9 953 aa26.8■■□□□ 1.88
COL13A1-202ENST00000357811 FANCAO15360 1455 aa26.79■■□□□ 1.88
COL13A1-202ENST00000357811 ZFYVE16Q7Z3T8 1539 aa26.79■■□□□ 1.88
COL13A1-202ENST00000357811 BCAR3O75815 825 aa26.79■■□□□ 1.88
COL13A1-202ENST00000357811 RNF17Q9BXT8 1623 aaKnown RBP26.79■■□□□ 1.88
COL13A1-202ENST00000357811 RGS3P49796 1198 aa26.78■■□□□ 1.88
COL13A1-202ENST00000357811 GGT6Q6P531 493 aa26.78■■□□□ 1.88
COL13A1-202ENST00000357811 SLC4A3P48751 1232 aa26.77■■□□□ 1.88
COL13A1-202ENST00000357811 TRPM2O94759 1503 aa26.77■■□□□ 1.88
COL13A1-202ENST00000357811 TMEM132EQ6IEE7 984 aa26.77■■□□□ 1.88
COL13A1-202ENST00000357811 SLFN5Q08AF3 891 aa26.75■■□□□ 1.87
COL13A1-202ENST00000357811 PTPRTO14522 1441 aa26.75■■□□□ 1.87
COL13A1-202ENST00000357811 ASXL1Q8IXJ9 1541 aa26.74■■□□□ 1.87
COL13A1-202ENST00000357811 RRP7AQ9Y3A4 280 aaKnown RBP26.74■■□□□ 1.87
COL13A1-202ENST00000357811 EIF3AQ14152 1382 aaKnown RBP26.74■■□□□ 1.87
COL13A1-202ENST00000357811 MS4A1P11836 297 aa26.73■■□□□ 1.87
COL13A1-202ENST00000357811 ZNF521Q96K83 1311 aa26.73■■□□□ 1.87
COL13A1-202ENST00000357811 ADGRL1O94910 1474 aa26.72■■□□□ 1.87
COL13A1-202ENST00000357811 IQGAP1P46940 1657 aa26.72■■□□□ 1.87
COL13A1-202ENST00000357811 SPHKAPQ2M3C7 1700 aa26.72■■□□□ 1.87
COL13A1-202ENST00000357811 SLC12A5Q9H2X9 1139 aa26.71■■□□□ 1.87
COL13A1-202ENST00000357811 RTEL1-TNFRSF6BF6WH68 1400 aa26.71■■□□□ 1.87
COL13A1-202ENST00000357811 CFAP65Q6ZU64 1925 aaKnown RBP26.71■■□□□ 1.87
COL13A1-202ENST00000357811 ATP7AQ04656 1500 aa26.7■■□□□ 1.87
COL13A1-202ENST00000357811 UHRF1BP1LA0JNW5 1464 aa26.68■■□□□ 1.86
COL13A1-202ENST00000357811 NEFMP07197 916 aa26.67■■□□□ 1.86
COL13A1-202ENST00000357811 SAFB2Q14151 953 aaKnown RBP eCLIP26.67■■□□□ 1.86
COL13A1-202ENST00000357811 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.67■■□□□ 1.86
COL13A1-202ENST00000357811 INSRP06213 1382 aa26.66■■□□□ 1.86
COL13A1-202ENST00000357811 CLASP1Q7Z460 1538 aa26.66■■□□□ 1.86
COL13A1-202ENST00000357811 KDM2BQ8NHM5 1336 aa26.66■■□□□ 1.86
COL13A1-202ENST00000357811 SYNMO15061 1565 aa26.65■■□□□ 1.86
COL13A1-202ENST00000357811 CEP152O94986 1710 aa26.65■■□□□ 1.86
COL13A1-202ENST00000357811 ERVK-7P63135 1459 aa26.65■■□□□ 1.86
COL13A1-202ENST00000357811 MORC1Q86VD1 984 aa26.64■■□□□ 1.85
COL13A1-202ENST00000357811 NOS1P29475 1434 aa26.64■■□□□ 1.85
COL13A1-202ENST00000357811 CENPQQ7L2Z9 268 aaPredicted RBP26.63■■□□□ 1.85
COL13A1-202ENST00000357811 FRAT1Q92837 279 aaPredicted RBP26.63■■□□□ 1.85
COL13A1-202ENST00000357811 STAC3Q96MF2 364 aa26.63■■□□□ 1.85
COL13A1-202ENST00000357811 PIK3C2GO75747 1445 aa26.63■■□□□ 1.85
COL13A1-202ENST00000357811 CANXP27824 592 aaKnown RBP26.63■■□□□ 1.85
COL13A1-202ENST00000357811 CENPJQ9HC77 1338 aaPredicted RBP26.62■■□□□ 1.85
COL13A1-202ENST00000357811 TET3O43151 1660 aa26.61■■□□□ 1.85
COL13A1-202ENST00000357811 MYOM1P52179 1685 aa26.6■■□□□ 1.85
COL13A1-202ENST00000357811 PANK1Q8TE04 598 aa26.6■■□□□ 1.85
COL13A1-202ENST00000357811 BCL2L13Q9BXK5 485 aa26.6■■□□□ 1.85
COL13A1-202ENST00000357811 COG6Q9Y2V7 657 aa26.58■■□□□ 1.85
COL13A1-202ENST00000357811 ASXL2Q76L83 1435 aa26.58■■□□□ 1.85
COL13A1-202ENST00000357811 ANO8Q9HCE9 1232 aaPredicted RBP26.57■■□□□ 1.84
COL13A1-202ENST00000357811 E9PSI1 815 aa26.57■■□□□ 1.84
COL13A1-202ENST00000357811 ABCA6Q8N139 1617 aa26.56■■□□□ 1.84
COL13A1-202ENST00000357811 NSD3Q9BZ95 1437 aa26.56■■□□□ 1.84
COL13A1-202ENST00000357811 WWC1Q8IX03 1113 aa26.56■■□□□ 1.84
COL13A1-202ENST00000357811 TRMT2AQ8IZ69 625 aaKnown RBP26.56■■□□□ 1.84
COL13A1-202ENST00000357811 KDM5AP29375 1690 aaKnown RBP26.56■■□□□ 1.84
COL13A1-202ENST00000357811 IGHDP01880 384 aa26.55■■□□□ 1.84
COL13A1-202ENST00000357811 DEPDC5O75140 1603 aa26.54■■□□□ 1.84
COL13A1-202ENST00000357811 NKTRP30414 1462 aaKnown RBP26.54■■□□□ 1.84
COL13A1-202ENST00000357811 TNNQ9UQP3 1299 aa26.53■■□□□ 1.84
COL13A1-202ENST00000357811 INO80Q9ULG1 1556 aaPredicted RBP26.53■■□□□ 1.84
COL13A1-202ENST00000357811 C8orf34Q49A92 452 aa26.53■■□□□ 1.84
COL13A1-202ENST00000357811 MAP3K4Q9Y6R4 1608 aa26.52■■□□□ 1.84
COL13A1-202ENST00000357811 NPM1P06748 294 aaKnown RBP eCLIP26.52■■□□□ 1.84
COL13A1-202ENST00000357811 MTHFSP49914 203 aa26.52■■□□□ 1.84
COL13A1-202ENST00000357811 NPC1L1Q9UHC9 1359 aa26.52■■□□□ 1.84
COL13A1-202ENST00000357811 STK26Q9P289 416 aa26.52■■□□□ 1.84
COL13A1-202ENST00000357811 DAXXQ9UER7 740 aaPredicted RBP26.52■■□□□ 1.84
COL13A1-202ENST00000357811 RAPGEF3O95398 923 aa26.52■■□□□ 1.84
COL13A1-202ENST00000357811 FAM161AQ3B820 660 aa26.51■■□□□ 1.83
COL13A1-202ENST00000357811 CLUAP1Q96AJ1 413 aa26.51■■□□□ 1.83
COL13A1-202ENST00000357811 MROH1Q8NDA8 1641 aa26.5■■□□□ 1.83
COL13A1-202ENST00000357811 TCP11L2Q8N4U5 519 aa26.5■■□□□ 1.83
COL13A1-202ENST00000357811 CABP2Q9NPB3 220 aa26.49■■□□□ 1.83
COL13A1-202ENST00000357811 VWDEQ8N2E2 1590 aa26.49■■□□□ 1.83
COL13A1-202ENST00000357811 ABCA9Q8IUA7 1624 aa26.48■■□□□ 1.83
COL13A1-202ENST00000357811 MROH2AA6NES4 1674 aa26.48■■□□□ 1.83
COL13A1-202ENST00000357811 ARAP3Q8WWN8 1544 aa26.47■■□□□ 1.83
COL13A1-202ENST00000357811 DDRGK1Q96HY6 314 aa26.46■■□□□ 1.83
COL13A1-202ENST00000357811 C14orf93Q9H972 538 aaKnown RBP26.46■■□□□ 1.83
COL13A1-202ENST00000357811 PPRC1Q5VV67 1664 aaKnown RBP26.46■■□□□ 1.83
COL13A1-202ENST00000357811 NPATQ14207 1427 aa26.45■■□□□ 1.82
COL13A1-202ENST00000357811 KIF1BO60333 1816 aa26.45■■□□□ 1.82
COL13A1-202ENST00000357811 EFCAB6Q5THR3 1501 aa26.45■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms