RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 EIF3AQ14152 1382 aaKnown RBP30.88■■■□□ 2.53
NPAS3-203ENST00000357798 VIRMAQ69YN4 1812 aaKnown RBP30.88■■■□□ 2.53
NPAS3-203ENST00000357798 BRPF3Q9ULD4 1205 aa30.86■■■□□ 2.53
NPAS3-203ENST00000357798 PIK3C2GO75747 1445 aa30.86■■■□□ 2.53
NPAS3-203ENST00000357798 FRAT1Q92837 279 aaPredicted RBP30.85■■■□□ 2.53
NPAS3-203ENST00000357798 KNSTRNQ9Y448 316 aa30.85■■■□□ 2.53
NPAS3-203ENST00000357798 FBLN2P98095 1184 aa30.83■■■□□ 2.53
NPAS3-203ENST00000357798 SLFN5Q08AF3 891 aa30.83■■■□□ 2.53
NPAS3-203ENST00000357798 MADDQ8WXG6 1647 aa30.82■■■□□ 2.52
NPAS3-203ENST00000357798 AMER1Q5JTC6 1135 aaPredicted RBP30.82■■■□□ 2.52
NPAS3-203ENST00000357798 ASXL1Q8IXJ9 1541 aa30.82■■■□□ 2.52
NPAS3-203ENST00000357798 ABCC2Q92887 1545 aa30.81■■■□□ 2.52
NPAS3-203ENST00000357798 TRMT2AQ8IZ69 625 aaKnown RBP30.81■■■□□ 2.52
NPAS3-203ENST00000357798 DUOX2Q9NRD8 1548 aa30.8■■■□□ 2.52
NPAS3-203ENST00000357798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.8■■■□□ 2.52
NPAS3-203ENST00000357798 NPC1L1Q9UHC9 1359 aa30.78■■■□□ 2.52
NPAS3-203ENST00000357798 ARHGAP5Q13017 1502 aa30.78■■■□□ 2.52
NPAS3-203ENST00000357798 CDCA8Q53HL2 280 aa30.77■■■□□ 2.52
NPAS3-203ENST00000357798 NKTRP30414 1462 aaKnown RBP30.76■■■□□ 2.52
NPAS3-203ENST00000357798 TTC37Q6PGP7 1564 aa30.75■■■□□ 2.51
NPAS3-203ENST00000357798 ERCC6Q03468 1493 aa30.75■■■□□ 2.51
NPAS3-203ENST00000357798 MYOM1P52179 1685 aa30.75■■■□□ 2.51
NPAS3-203ENST00000357798 RGS3P49796 1198 aa30.73■■■□□ 2.51
NPAS3-203ENST00000357798 SPHKAPQ2M3C7 1700 aa30.72■■■□□ 2.51
NPAS3-203ENST00000357798 FRAT2O75474 233 aaPredicted RBP30.71■■■□□ 2.51
NPAS3-203ENST00000357798 SCAF11Q99590 1463 aaKnown RBP30.7■■■□□ 2.51
NPAS3-203ENST00000357798 SCAPERQ9BY12 1400 aa30.69■■■□□ 2.5
NPAS3-203ENST00000357798 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP30.69■■■□□ 2.5
NPAS3-203ENST00000357798 NINLQ9Y2I6 1382 aa30.65■■■□□ 2.5
NPAS3-203ENST00000357798 NGEFQ8N5V2 710 aa30.65■■■□□ 2.5
NPAS3-203ENST00000357798 E9PSI1 815 aa30.65■■■□□ 2.5
NPAS3-203ENST00000357798 CEP152O94986 1710 aa30.65■■■□□ 2.5
NPAS3-203ENST00000357798 KDM5AP29375 1690 aaKnown RBP30.64■■■□□ 2.5
NPAS3-203ENST00000357798 STAC3Q96MF2 364 aa30.64■■■□□ 2.49
NPAS3-203ENST00000357798 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.62■■■□□ 2.49
NPAS3-203ENST00000357798 CGNL1Q0VF96 1302 aa30.62■■■□□ 2.49
NPAS3-203ENST00000357798 USP19O94966 1318 aa30.61■■■□□ 2.49
NPAS3-203ENST00000357798 TRPM2O94759 1503 aa30.61■■■□□ 2.49
NPAS3-203ENST00000357798 SPINK5Q9NQ38 1064 aaPredicted RBP30.61■■■□□ 2.49
NPAS3-203ENST00000357798 CCDC146Q8IYE0 955 aa30.6■■■□□ 2.49
NPAS3-203ENST00000357798 MAPK8IP3Q9UPT6 1336 aa30.6■■■□□ 2.49
NPAS3-203ENST00000357798 PDE3AQ14432 1141 aa30.6■■■□□ 2.49
NPAS3-203ENST00000357798 KIAA1210Q9ULL0 1709 aa30.59■■■□□ 2.49
NPAS3-203ENST00000357798 APAF1O14727 1248 aa30.59■■■□□ 2.49
NPAS3-203ENST00000357798 BCAR3O75815 825 aa30.59■■■□□ 2.49
NPAS3-203ENST00000357798 IGHDP01880 384 aa30.56■■■□□ 2.48
NPAS3-203ENST00000357798 FAM43AQ8N2R8 423 aa30.54■■■□□ 2.48
NPAS3-203ENST00000357798 BECN1Q14457 450 aa30.54■■■□□ 2.48
NPAS3-203ENST00000357798 CLUAP1Q96AJ1 413 aa30.51■■■□□ 2.48
NPAS3-203ENST00000357798 NLRP1Q9C000 1473 aa30.51■■■□□ 2.47
NPAS3-203ENST00000357798 CLTCL1P53675 1640 aa30.51■■■□□ 2.47
NPAS3-203ENST00000357798 PTPRTO14522 1441 aa30.5■■■□□ 2.47
NPAS3-203ENST00000357798 ZMYM3Q14202 1370 aa30.49■■■□□ 2.47
NPAS3-203ENST00000357798 CENPJQ9HC77 1338 aaPredicted RBP30.49■■■□□ 2.47
NPAS3-203ENST00000357798 SLC24A1O60721 1099 aa30.47■■■□□ 2.47
NPAS3-203ENST00000357798 SHROOM2Q13796 1616 aa30.46■■■□□ 2.47
NPAS3-203ENST00000357798 AAMPQ13685 434 aa30.46■■■□□ 2.47
NPAS3-203ENST00000357798 ABCC1P33527 1531 aa30.45■■■□□ 2.47
NPAS3-203ENST00000357798 DMRT2Q9Y5R5 561 aa30.45■■■□□ 2.46
NPAS3-203ENST00000357798 NEURL4Q96JN8 1562 aa30.45■■■□□ 2.46
NPAS3-203ENST00000357798 SEC24BO95487 1268 aa30.43■■■□□ 2.46
NPAS3-203ENST00000357798 POLR3AO14802 1390 aaPredicted RBP30.42■■■□□ 2.46
NPAS3-203ENST00000357798 ERVK-7P63135 1459 aa30.42■■■□□ 2.46
NPAS3-203ENST00000357798 PLCH2O75038 1416 aa30.42■■■□□ 2.46
NPAS3-203ENST00000357798 TET3O43151 1660 aa30.42■■■□□ 2.46
NPAS3-203ENST00000357798 DEPDC5O75140 1603 aa30.41■■■□□ 2.46
NPAS3-203ENST00000357798 CANXP27824 592 aaKnown RBP30.41■■■□□ 2.46
NPAS3-203ENST00000357798 RSPH6AQ9H0K4 717 aa30.4■■■□□ 2.46
NPAS3-203ENST00000357798 COG6Q9Y2V7 657 aa30.4■■■□□ 2.46
NPAS3-203ENST00000357798 PMFBP1Q8TBY8 1022 aa30.39■■■□□ 2.46
NPAS3-203ENST00000357798 PANK1Q8TE04 598 aa30.39■■■□□ 2.46
NPAS3-203ENST00000357798 POGKQ9P215 609 aa30.39■■■□□ 2.46
NPAS3-203ENST00000357798 WWC1Q8IX03 1113 aa30.38■■■□□ 2.45
NPAS3-203ENST00000357798 SHPRHQ149N8 1683 aa30.37■■■□□ 2.45
NPAS3-203ENST00000357798 ANTXR1Q9H6X2 564 aa30.37■■■□□ 2.45
NPAS3-203ENST00000357798 L1TD1Q5T7N2 865 aaKnown RBP30.36■■■□□ 2.45
NPAS3-203ENST00000357798 MAP3K4Q9Y6R4 1608 aa30.35■■■□□ 2.45
NPAS3-203ENST00000357798 MYOM2P54296 1465 aa30.34■■■□□ 2.45
NPAS3-203ENST00000357798 TRAPPC8Q9Y2L5 1435 aa30.34■■■□□ 2.45
NPAS3-203ENST00000357798 EFCAB2Q5VUJ9 269 aa30.34■■■□□ 2.45
NPAS3-203ENST00000357798 UPF2Q9HAU5 1272 aaKnown RBP30.34■■■□□ 2.45
NPAS3-203ENST00000357798 ABCA6Q8N139 1617 aa30.34■■■□□ 2.45
NPAS3-203ENST00000357798 MYO3AQ8NEV4 1616 aa30.34■■■□□ 2.45
NPAS3-203ENST00000357798 RTEL1-TNFRSF6BF6WH68 1400 aa30.34■■■□□ 2.45
NPAS3-203ENST00000357798 CARD14Q9BXL6 1004 aa30.33■■■□□ 2.45
NPAS3-203ENST00000357798 TBC1D32Q96NH3 1257 aa30.33■■■□□ 2.45
NPAS3-203ENST00000357798 SLKQ9H2G2 1235 aaPredicted RBP30.32■■■□□ 2.44
NPAS3-203ENST00000357798 IQSEC2Q5JU85 1478 aa30.31■■■□□ 2.44
NPAS3-203ENST00000357798 ZFYVE16Q7Z3T8 1539 aa30.3■■■□□ 2.44
NPAS3-203ENST00000357798 RARSP54136 660 aaKnown RBP30.3■■■□□ 2.44
NPAS3-203ENST00000357798 VWDEQ8N2E2 1590 aa30.29■■■□□ 2.44
NPAS3-203ENST00000357798 SBNO2Q9Y2G9 1366 aa30.28■■■□□ 2.44
NPAS3-203ENST00000357798 UBE2Q2Q8WVN8 375 aa30.27■■■□□ 2.44
NPAS3-203ENST00000357798 IFT172Q9UG01 1749 aa30.26■■■□□ 2.43
NPAS3-203ENST00000357798 PHF23Q9BUL5 403 aaPredicted RBP30.26■■■□□ 2.43
NPAS3-203ENST00000357798 EIF5BO60841 1220 aaKnown RBP30.25■■■□□ 2.43
NPAS3-203ENST00000357798 RUNDC1Q96C34 613 aa30.25■■■□□ 2.43
NPAS3-203ENST00000357798 PCDHB15Q9Y5E8 787 aa30.25■■■□□ 2.43
NPAS3-203ENST00000357798 SPAG9O60271 1321 aaKnown RBP30.25■■■□□ 2.43
NPAS3-203ENST00000357798 TBC1D2Q9BYX2 928 aa30.24■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms