RNA–Protein interactions for RNA: ENST00000357654.7

BRCA1-203, Transcript of BRCA1, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA1, Length 7,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-203ENST00000357654 OFD1O75665 1012 aa7.1□□□□□ -1.27
BRCA1-203ENST00000357654 ZNF219Q9P2Y4 722 aaPredicted RBP7.1□□□□□ -1.27
BRCA1-203ENST00000357654 HSP90AB4PQ58FF6 505 aa7.1□□□□□ -1.27
BRCA1-203ENST00000357654 MAP7D2Q96T17 732 aa7.1□□□□□ -1.27
BRCA1-203ENST00000357654 RBM42Q9BTD8 480 aaKnown RBP7.1□□□□□ -1.27
BRCA1-203ENST00000357654 ZHX3Q9H4I2 956 aa7.1□□□□□ -1.27
BRCA1-203ENST00000357654 GOLGA6L19H0YKK7 550 aa7.09□□□□□ -1.27
BRCA1-203ENST00000357654 CSPP1Q1MSJ5 1256 aa7.09□□□□□ -1.27
BRCA1-203ENST00000357654 KRT18P05783 430 aaKnown RBP7.09□□□□□ -1.27
BRCA1-203ENST00000357654 SYCP1Q15431 976 aa7.09□□□□□ -1.27
BRCA1-203ENST00000357654 NUTM2GQ5VZR2 741 aa7.09□□□□□ -1.27
BRCA1-203ENST00000357654 ZSCAN29Q8IWY8 852 aaPredicted RBP7.09□□□□□ -1.27
BRCA1-203ENST00000357654 DRC1Q96MC2 740 aa7.09□□□□□ -1.27
BRCA1-203ENST00000357654 SMC4Q9NTJ3 1288 aa7.09□□□□□ -1.27
BRCA1-203ENST00000357654 CCDC146Q8IYE0 955 aa7.09□□□□□ -1.27
BRCA1-203ENST00000357654 CPLX1O14810 134 aa7.09□□□□□ -1.27
BRCA1-203ENST00000357654 AIMP1Q12904 312 aaKnown RBP7.09□□□□□ -1.27
BRCA1-203ENST00000357654 CLUAP1Q96AJ1 413 aa7.09□□□□□ -1.27
BRCA1-203ENST00000357654 RUFY1Q96T51 708 aa7.09□□□□□ -1.27
BRCA1-203ENST00000357654 ATF3P18847 181 aa7.09□□□□□ -1.27
BRCA1-203ENST00000357654 GBP4Q96PP9 640 aa7.09□□□□□ -1.27
BRCA1-203ENST00000357654 BECN2A8MW95 431 aa7.09□□□□□ -1.28
BRCA1-203ENST00000357654 PUS7Q96PZ0 661 aaKnown RBP7.09□□□□□ -1.28
BRCA1-203ENST00000357654 E9PSI1 815 aa7.08□□□□□ -1.28
BRCA1-203ENST00000357654 ANKRD20A12PQ8NF67 263 aa7.08□□□□□ -1.28
BRCA1-203ENST00000357654 C9orf78Q9NZ63 289 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-203ENST00000357654 VTI1AQ96AJ9 217 aa7.08□□□□□ -1.28
BRCA1-203ENST00000357654 WDHD1O75717 1129 aaPredicted RBP7.08□□□□□ -1.28
BRCA1-203ENST00000357654 TEFQ10587 303 aa7.08□□□□□ -1.28
BRCA1-203ENST00000357654 ANO2Q9NQ90 1003 aa7.08□□□□□ -1.28
BRCA1-203ENST00000357654 CALD1Q05682 793 aaKnown RBP7.08□□□□□ -1.28
BRCA1-203ENST00000357654 HMMRO75330 724 aa7.08□□□□□ -1.28
BRCA1-203ENST00000357654 TRDNQ13061 729 aa7.08□□□□□ -1.28
BRCA1-203ENST00000357654 NEUROD6Q96NK8 337 aa7.08□□□□□ -1.28
BRCA1-203ENST00000357654 SEPT11Q9NVA2 429 aaKnown RBP7.08□□□□□ -1.28
BRCA1-203ENST00000357654 RDXP35241 583 aaKnown RBP7.07□□□□□ -1.28
BRCA1-203ENST00000357654 NEXNQ0ZGT2 675 aa7.07□□□□□ -1.28
BRCA1-203ENST00000357654 WASHC4Q2M389 1173 aa7.07□□□□□ -1.28
BRCA1-203ENST00000357654 CDK5RAP3Q96JB5 506 aa7.07□□□□□ -1.28
BRCA1-203ENST00000357654 KIF3AQ9Y496 699 aa7.07□□□□□ -1.28
BRCA1-203ENST00000357654 LMOD3Q0VAK6 560 aa7.07□□□□□ -1.28
BRCA1-203ENST00000357654 IPO9Q96P70 1041 aaKnown RBP7.07□□□□□ -1.28
BRCA1-203ENST00000357654 WASHC2AQ641Q2 1341 aa7.07□□□□□ -1.28
BRCA1-203ENST00000357654 BICDL1Q6ZP65 573 aa7.06□□□□□ -1.28
BRCA1-203ENST00000357654 HDAC5Q9UQL6 1122 aa7.06□□□□□ -1.28
BRCA1-203ENST00000357654 COMMD10Q9Y6G5 202 aa7.06□□□□□ -1.28
BRCA1-203ENST00000357654 SEPT7Q16181 437 aaKnown RBP7.06□□□□□ -1.28
BRCA1-203ENST00000357654 CAGE1Q8TC20 777 aa7.06□□□□□ -1.28
BRCA1-203ENST00000357654 ATP2B1P20020 1258 aa7.06□□□□□ -1.28
BRCA1-203ENST00000357654 WWC3Q9ULE0 1092 aa7.06□□□□□ -1.28
BRCA1-203ENST00000357654 SSR1P43307 286 aaKnown RBP7.05□□□□□ -1.28
BRCA1-203ENST00000357654 ENOX2Q16206 610 aaKnown RBP7.05□□□□□ -1.28
BRCA1-203ENST00000357654 GRIPAP1Q4V328 841 aa7.05□□□□□ -1.28
BRCA1-203ENST00000357654 PDILTQ8N807 584 aa7.05□□□□□ -1.28
BRCA1-203ENST00000357654 UQCRHP07919 91 aa7.05□□□□□ -1.28
BRCA1-203ENST00000357654 CPLX2Q6PUV4 134 aaKnown RBP7.05□□□□□ -1.28
BRCA1-203ENST00000357654 CLEC11AQ9Y240 323 aa7.05□□□□□ -1.28
BRCA1-203ENST00000357654 ZRSR2Q15696 482 aaKnown RBP7.05□□□□□ -1.28
BRCA1-203ENST00000357654 DIAPH3Q9NSV4 1193 aa7.05□□□□□ -1.28
BRCA1-203ENST00000357654 NOP58Q9Y2X3 529 aaKnown RBP7.05□□□□□ -1.28
BRCA1-203ENST00000357654 KCNA4P22459 653 aa7.05□□□□□ -1.28
BRCA1-203ENST00000357654 EP400NLQ6ZTU2 488 aa7.05□□□□□ -1.28
BRCA1-203ENST00000357654 HOMER2Q9NSB8 354 aa7.04□□□□□ -1.28
BRCA1-203ENST00000357654 UQCRHLA0A096LP55 91 aa7.04□□□□□ -1.28
BRCA1-203ENST00000357654 RRP7AQ9Y3A4 280 aaKnown RBP7.04□□□□□ -1.28
BRCA1-203ENST00000357654 RBM19Q9Y4C8 960 aaKnown RBP7.04□□□□□ -1.28
BRCA1-203ENST00000357654 CCDC173Q0VFZ6 552 aa7.04□□□□□ -1.28
BRCA1-203ENST00000357654 CYB5RLQ6IPT4 315 aa7.04□□□□□ -1.28
BRCA1-203ENST00000357654 MRPS9P82933 396 aaKnown RBP7.04□□□□□ -1.28
BRCA1-203ENST00000357654 IFIT2P09913 472 aaKnown RBP7.04□□□□□ -1.28
BRCA1-203ENST00000357654 LIG1P18858 919 aa7.04□□□□□ -1.28
BRCA1-203ENST00000357654 BRPF1P55201 1214 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-203ENST00000357654 GPS2Q13227 327 aa7.04□□□□□ -1.28
BRCA1-203ENST00000357654 NLRP2Q9NX02 1062 aa7.04□□□□□ -1.28
BRCA1-203ENST00000357654 SART3Q15020 963 aaKnown RBP7.03□□□□□ -1.28
BRCA1-203ENST00000357654 BCCIPQ9P287 314 aaKnown RBP eCLIP7.03□□□□□ -1.28
BRCA1-203ENST00000357654 MIER1Q8N108 512 aa7.03□□□□□ -1.28
BRCA1-203ENST00000357654 CIZ1Q9ULV3 898 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-203ENST00000357654 LRRFIP1Q32MZ4 808 aaKnown RBP7.03□□□□□ -1.28
BRCA1-203ENST00000357654 CHMP4AQ9BY43 222 aa7.03□□□□□ -1.28
BRCA1-203ENST00000357654 RWDD1Q9H446 243 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-203ENST00000357654 PIBF1Q8WXW3 757 aa7.02□□□□□ -1.28
BRCA1-203ENST00000357654 BRMS1Q9HCU9 246 aa7.02□□□□□ -1.28
BRCA1-203ENST00000357654 CDR1P51861 262 aa7.02□□□□□ -1.29
BRCA1-203ENST00000357654 BICD2Q8TD16 824 aa7.02□□□□□ -1.29
BRCA1-203ENST00000357654 WASHC2CQ9Y4E1 1318 aa7.02□□□□□ -1.29
BRCA1-203ENST00000357654 ZNF771Q7L3S4 317 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-203ENST00000357654 TRMT1LQ7Z2T5 733 aaKnown RBP7.02□□□□□ -1.29
BRCA1-203ENST00000357654 RIC3Q7Z5B4 369 aa7.02□□□□□ -1.29
BRCA1-203ENST00000357654 HOOK1Q9UJC3 728 aaKnown RBP7.02□□□□□ -1.29
BRCA1-203ENST00000357654 BIN2Q9UBW5 565 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-203ENST00000357654 SPINK5Q9NQ38 1064 aaPredicted RBP7.01□□□□□ -1.29
BRCA1-203ENST00000357654 NACADO15069 1562 aa7.01□□□□□ -1.29
BRCA1-203ENST00000357654 ZNF76P36508 570 aa7.01□□□□□ -1.29
BRCA1-203ENST00000357654 SAFBQ15424 915 aaKnown RBP eCLIP7.01□□□□□ -1.29
BRCA1-203ENST00000357654 KIF6Q6ZMV9 814 aa7.01□□□□□ -1.29
BRCA1-203ENST00000357654 ZNF354CQ86Y25 554 aa7.01□□□□□ -1.29
BRCA1-203ENST00000357654 TAX1BP1Q86VP1 789 aa7.01□□□□□ -1.29
BRCA1-203ENST00000357654 TANGO6Q9C0B7 1094 aa7.01□□□□□ -1.29
BRCA1-203ENST00000357654 TERF2IPQ9NYB0 399 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms