RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 PLEKHG5O94827 1062 aa20.12■□□□□ 0.81
USP6-202ENST00000357482 RSPH6AQ9H0K4 717 aa20.1■□□□□ 0.81
USP6-202ENST00000357482 NEURL4Q96JN8 1562 aa20.09■□□□□ 0.81
USP6-202ENST00000357482 VWDEQ8N2E2 1590 aa20.08■□□□□ 0.81
USP6-202ENST00000357482 LMTK2Q8IWU2 1503 aa20.08■□□□□ 0.8
USP6-202ENST00000357482 STAG3Q9UJ98 1225 aa20.08■□□□□ 0.8
USP6-202ENST00000357482 NPHP4O75161 1426 aaPredicted RBP20.06■□□□□ 0.8
USP6-202ENST00000357482 ROCK1Q13464 1354 aa20.06■□□□□ 0.8
USP6-202ENST00000357482 UBR1Q8IWV7 1749 aa20.06■□□□□ 0.8
USP6-202ENST00000357482 EFCAB6Q5THR3 1501 aa20.05■□□□□ 0.8
USP6-202ENST00000357482 IQSEC2Q5JU85 1478 aa20.03■□□□□ 0.8
USP6-202ENST00000357482 PIK3C2BO00750 1634 aa20.02■□□□□ 0.8
USP6-202ENST00000357482 MED14O60244 1454 aa20.02■□□□□ 0.79
USP6-202ENST00000357482 IQGAP1P46940 1657 aa20.02■□□□□ 0.79
USP6-202ENST00000357482 USP35Q9P2H5 1018 aa20.01■□□□□ 0.79
USP6-202ENST00000357482 EID1Q9Y6B2 187 aa20■□□□□ 0.79
USP6-202ENST00000357482 UNC13BO14795 1591 aa20■□□□□ 0.79
USP6-202ENST00000357482 TXNDC2Q86VQ3 553 aa20■□□□□ 0.79
USP6-202ENST00000357482 IDI1Q13907 227 aa19.99■□□□□ 0.79
USP6-202ENST00000357482 NBR1Q14596 966 aa19.99■□□□□ 0.79
USP6-202ENST00000357482 SYNMO15061 1565 aa19.99■□□□□ 0.79
USP6-202ENST00000357482 WASHC2AQ641Q2 1341 aa19.99■□□□□ 0.79
USP6-202ENST00000357482 SCAF11Q99590 1463 aaKnown RBP19.99■□□□□ 0.79
USP6-202ENST00000357482 TET3O43151 1660 aa19.99■□□□□ 0.79
USP6-202ENST00000357482 UBAP1LF5GYI3 381 aa19.98■□□□□ 0.79
USP6-202ENST00000357482 RPRD2Q5VT52 1461 aaKnown RBP19.98■□□□□ 0.79
USP6-202ENST00000357482 NOS1P29475 1434 aa19.97■□□□□ 0.79
USP6-202ENST00000357482 SLIT1O75093 1534 aa19.96■□□□□ 0.79
USP6-202ENST00000357482 CPS1P31327 1500 aa19.96■□□□□ 0.79
USP6-202ENST00000357482 LTKP29376 864 aa19.96■□□□□ 0.79
USP6-202ENST00000357482 RTN4Q9NQC3 1192 aaKnown RBP19.96■□□□□ 0.79
USP6-202ENST00000357482 GCC2Q8IWJ2 1684 aa19.95■□□□□ 0.79
USP6-202ENST00000357482 NUP155O75694 1391 aa19.95■□□□□ 0.78
USP6-202ENST00000357482 ARHGAP23Q9P227 1491 aa19.95■□□□□ 0.78
USP6-202ENST00000357482 SLC52A1Q9NWF4 448 aa19.95■□□□□ 0.78
USP6-202ENST00000357482 TMEM2Q9UHN6 1383 aa19.95■□□□□ 0.78
USP6-202ENST00000357482 IQGAP3Q86VI3 1631 aa19.92■□□□□ 0.78
USP6-202ENST00000357482 ADGRB3O60242 1522 aa19.92■□□□□ 0.78
USP6-202ENST00000357482 KDM5AP29375 1690 aaKnown RBP19.92■□□□□ 0.78
USP6-202ENST00000357482 CHGAP10645 457 aaKnown RBP19.9■□□□□ 0.78
USP6-202ENST00000357482 E9PCH4 1651 aa19.9■□□□□ 0.78
USP6-202ENST00000357482 ZMYND15Q9H091 742 aa19.88■□□□□ 0.77
USP6-202ENST00000357482 CCER2I3L3R5 266 aa19.87■□□□□ 0.77
USP6-202ENST00000357482 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
USP6-202ENST00000357482 PPP1R15AO75807 674 aaPredicted RBP19.86■□□□□ 0.77
USP6-202ENST00000357482 PIP4K2BP78356 416 aa19.86■□□□□ 0.77
USP6-202ENST00000357482 TOM1O60784 492 aa19.85■□□□□ 0.77
USP6-202ENST00000357482 STRCP1A6NGW2 1772 aa19.84■□□□□ 0.77
USP6-202ENST00000357482 SLC26A8Q96RN1 970 aa19.84■□□□□ 0.77
USP6-202ENST00000357482 PPP4R2Q9NY27 417 aa19.84■□□□□ 0.77
USP6-202ENST00000357482 SETD5Q9C0A6 1442 aa19.83■□□□□ 0.77
USP6-202ENST00000357482 IPO9Q96P70 1041 aaKnown RBP19.83■□□□□ 0.77
USP6-202ENST00000357482 NAIPQ13075 1403 aa19.83■□□□□ 0.76
USP6-202ENST00000357482 RAB3GAP2Q9H2M9 1393 aa19.83■□□□□ 0.76
USP6-202ENST00000357482 HDGFP51858 240 aaKnown RBP19.82■□□□□ 0.76
USP6-202ENST00000357482 MYO5BQ9ULV0 1848 aa19.82■□□□□ 0.76
USP6-202ENST00000357482 LRRC7Q96NW7 1537 aa19.82■□□□□ 0.76
USP6-202ENST00000357482 TMEM131LA2VDJ0 1609 aa19.82■□□□□ 0.76
USP6-202ENST00000357482 RIMS2Q9UQ26 1411 aa19.81■□□□□ 0.76
USP6-202ENST00000357482 TRIM52Q96A61 297 aa19.81■□□□□ 0.76
USP6-202ENST00000357482 ANP32AP39687 249 aaKnown RBP19.8■□□□□ 0.76
USP6-202ENST00000357482 ZBTB47Q9UFB7 747 aaPredicted RBP19.8■□□□□ 0.76
USP6-202ENST00000357482 DHX57Q6P158 1386 aaKnown RBP19.8■□□□□ 0.76
USP6-202ENST00000357482 PAK3O75914 559 aaPredicted RBP19.8■□□□□ 0.76
USP6-202ENST00000357482 ZFYVE9O95405 1425 aa19.78■□□□□ 0.76
USP6-202ENST00000357482 NUTM2DQ5VT03 806 aaPredicted RBP19.78■□□□□ 0.76
USP6-202ENST00000357482 HFM1A2PYH4 1435 aa19.78■□□□□ 0.76
USP6-202ENST00000357482 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.77■□□□□ 0.76
USP6-202ENST00000357482 SPHKAPQ2M3C7 1700 aa19.76■□□□□ 0.75
USP6-202ENST00000357482 VSIG10Q8N0Z9 540 aa19.76■□□□□ 0.75
USP6-202ENST00000357482 PLEKHG1Q9ULL1 1385 aa19.75■□□□□ 0.75
USP6-202ENST00000357482 KCNA6P17658 529 aa19.74■□□□□ 0.75
USP6-202ENST00000357482 FAM43AQ8N2R8 423 aa19.74■□□□□ 0.75
USP6-202ENST00000357482 DISP3Q9P2K9 1392 aa19.73■□□□□ 0.75
USP6-202ENST00000357482 ZNF326Q5BKZ1 582 aaKnown RBP19.73■□□□□ 0.75
USP6-202ENST00000357482 PROSER2Q86WR7 435 aaPredicted RBP19.73■□□□□ 0.75
USP6-202ENST00000357482 HSPA1LP34931 641 aa19.71■□□□□ 0.75
USP6-202ENST00000357482 SLC4A1APQ9BWU0 796 aaKnown RBP19.71■□□□□ 0.75
USP6-202ENST00000357482 TMEM94Q12767 1356 aa19.7■□□□□ 0.74
USP6-202ENST00000357482 RBM33Q96EV2 1170 aaKnown RBP19.7■□□□□ 0.74
USP6-202ENST00000357482 PPM1GO15355 546 aaPredicted RBP19.69■□□□□ 0.74
USP6-202ENST00000357482 ALKQ9UM73 1620 aa19.69■□□□□ 0.74
USP6-202ENST00000357482 XIRP1Q702N8 1843 aaKnown RBP19.68■□□□□ 0.74
USP6-202ENST00000357482 TRPM2O94759 1503 aa19.68■□□□□ 0.74
USP6-202ENST00000357482 NKTRP30414 1462 aaKnown RBP19.67■□□□□ 0.74
USP6-202ENST00000357482 TBX22Q9Y458 520 aa19.67■□□□□ 0.74
USP6-202ENST00000357482 CLTCL1P53675 1640 aa19.67■□□□□ 0.74
USP6-202ENST00000357482 NWD1Q149M9 1564 aa19.67■□□□□ 0.74
USP6-202ENST00000357482 RRP9O43818 475 aaKnown RBP19.64■□□□□ 0.73
USP6-202ENST00000357482 DIP2AQ14689 1571 aa19.63■□□□□ 0.73
USP6-202ENST00000357482 ADAMTS13Q76LX8 1427 aa19.63■□□□□ 0.73
USP6-202ENST00000357482 CHD2O14647 1828 aaKnown RBP19.63■□□□□ 0.73
USP6-202ENST00000357482 NEFMP07197 916 aa19.63■□□□□ 0.73
USP6-202ENST00000357482 C14orf37Q86TY3 774 aa19.63■□□□□ 0.73
USP6-202ENST00000357482 MSH6P52701 1360 aa19.62■□□□□ 0.73
USP6-202ENST00000357482 KIF1BO60333 1816 aa19.62■□□□□ 0.73
USP6-202ENST00000357482 FOXD1Q16676 465 aa19.61■□□□□ 0.73
USP6-202ENST00000357482 FGD1P98174 961 aa19.6■□□□□ 0.73
USP6-202ENST00000357482 TIMELESSQ9UNS1 1208 aa19.59■□□□□ 0.73
USP6-202ENST00000357482 PIK3R4Q99570 1358 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms