RNA–Protein interactions for RNA: ENST00000356444.6

SEMA4D-202, Transcript of semaphorin 4D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SEMA4D, Length 4,503 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-202ENST00000356444 CBX1P83916 185 aa12.14□□□□□ -0.47
SEMA4D-202ENST00000356444 NBPF8Q3BBV2 869 aa12.14□□□□□ -0.47
SEMA4D-202ENST00000356444 NGEFQ8N5V2 710 aa12.13□□□□□ -0.47
SEMA4D-202ENST00000356444 NPHP1O15259 732 aa12.13□□□□□ -0.47
SEMA4D-202ENST00000356444 CLCN1P35523 988 aa12.13□□□□□ -0.47
SEMA4D-202ENST00000356444 SF3A1Q15459 793 aaKnown RBP12.13□□□□□ -0.47
SEMA4D-202ENST00000356444 MBD3O95983 291 aa12.12□□□□□ -0.47
SEMA4D-202ENST00000356444 XPCQ01831 940 aaPredicted RBP12.12□□□□□ -0.47
SEMA4D-202ENST00000356444 AAMPQ13685 434 aa12.12□□□□□ -0.47
SEMA4D-202ENST00000356444 NOC3LQ8WTT2 800 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-202ENST00000356444 ANO2Q9NQ90 1003 aa12.12□□□□□ -0.47
SEMA4D-202ENST00000356444 KIF21BO75037 1637 aa12.12□□□□□ -0.47
SEMA4D-202ENST00000356444 C20orf194Q5TEA3 1177 aa12.12□□□□□ -0.47
SEMA4D-202ENST00000356444 EIF4G1Q04637 1599 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-202ENST00000356444 PDE3AQ14432 1141 aa12.12□□□□□ -0.47
SEMA4D-202ENST00000356444 TSPY26PQ9H489 355 aa12.12□□□□□ -0.47
SEMA4D-202ENST00000356444 RRBP1Q9P2E9 1410 aaKnown RBP12.12□□□□□ -0.47
SEMA4D-202ENST00000356444 STK31Q9BXU1 1019 aa12.11□□□□□ -0.47
SEMA4D-202ENST00000356444 XRCC6P12956 609 aaKnown RBP eCLIP12.11□□□□□ -0.47
SEMA4D-202ENST00000356444 SETQ01105 290 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-202ENST00000356444 VPS37CA5D8V6 355 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-202ENST00000356444 INTS3Q68E01 1043 aaKnown RBP12.11□□□□□ -0.47
SEMA4D-202ENST00000356444 HDGFL2Q7Z4V5 671 aaPredicted RBP12.11□□□□□ -0.47
SEMA4D-202ENST00000356444 PANK2Q9BZ23 570 aa12.11□□□□□ -0.47
SEMA4D-202ENST00000356444 SPC24Q8NBT2 197 aa12.1□□□□□ -0.47
SEMA4D-202ENST00000356444 TPD52L1Q16890 204 aaPredicted RBP12.1□□□□□ -0.47
SEMA4D-202ENST00000356444 H3BQV1 296 aa12.1□□□□□ -0.47
SEMA4D-202ENST00000356444 IFFO2Q5TF58 517 aa12.1□□□□□ -0.47
SEMA4D-202ENST00000356444 CREBRFQ8IUR6 639 aa12.1□□□□□ -0.47
SEMA4D-202ENST00000356444 BICD2Q8TD16 824 aa12.1□□□□□ -0.47
SEMA4D-202ENST00000356444 KIF3AQ9Y496 699 aa12.1□□□□□ -0.47
SEMA4D-202ENST00000356444 CDC45O75419 566 aa12.09□□□□□ -0.47
SEMA4D-202ENST00000356444 APPP05067 770 aa12.09□□□□□ -0.47
SEMA4D-202ENST00000356444 HNRNPMP52272 730 aaKnown RBP eCLIP12.09□□□□□ -0.47
SEMA4D-202ENST00000356444 ARGLU1Q9NWB6 273 aaPredicted RBP12.09□□□□□ -0.47
SEMA4D-202ENST00000356444 MNS1Q8NEH6 495 aa12.09□□□□□ -0.47
SEMA4D-202ENST00000356444 TBC1D2Q9BYX2 928 aa12.09□□□□□ -0.47
SEMA4D-202ENST00000356444 PDCL2Q8N4E4 241 aa12.09□□□□□ -0.47
SEMA4D-202ENST00000356444 TPM3P06753 285 aa12.08□□□□□ -0.48
SEMA4D-202ENST00000356444 TRIM5Q9C035 493 aa12.08□□□□□ -0.48
SEMA4D-202ENST00000356444 SASS6Q6UVJ0 657 aa12.08□□□□□ -0.48
SEMA4D-202ENST00000356444 RUNDC1Q96C34 613 aa12.08□□□□□ -0.48
SEMA4D-202ENST00000356444 SMC3Q9UQE7 1217 aa12.08□□□□□ -0.48
SEMA4D-202ENST00000356444 K7ELQ4 463 aaPredicted RBP12.08□□□□□ -0.48
SEMA4D-202ENST00000356444 NEK4P51957 841 aa12.08□□□□□ -0.48
SEMA4D-202ENST00000356444 FBXW7Q969H0 707 aa12.08□□□□□ -0.48
SEMA4D-202ENST00000356444 CIZ1Q9ULV3 898 aaPredicted RBP12.08□□□□□ -0.48
SEMA4D-202ENST00000356444 TRAK1Q9UPV9 953 aa12.07□□□□□ -0.48
SEMA4D-202ENST00000356444 WASHC2CQ9Y4E1 1318 aa12.07□□□□□ -0.48
SEMA4D-202ENST00000356444 NOM1Q5C9Z4 860 aaKnown RBP12.07□□□□□ -0.48
SEMA4D-202ENST00000356444 FAM184AQ8NB25 1140 aa12.07□□□□□ -0.48
SEMA4D-202ENST00000356444 FGD6Q6ZV73 1430 aa12.06□□□□□ -0.48
SEMA4D-202ENST00000356444 ERICH4A6NGS2 130 aa12.06□□□□□ -0.48
SEMA4D-202ENST00000356444 RABEP1Q15276 862 aa12.06□□□□□ -0.48
SEMA4D-202ENST00000356444 CGNQ9P2M7 1197 aaKnown RBP12.06□□□□□ -0.48
SEMA4D-202ENST00000356444 A0A0G2JS52 829 aa12.06□□□□□ -0.48
SEMA4D-202ENST00000356444 RIPK4P57078 832 aa12.05□□□□□ -0.48
SEMA4D-202ENST00000356444 PPP2R1AP30153 589 aa12.05□□□□□ -0.48
SEMA4D-202ENST00000356444 TCP11L2Q8N4U5 519 aa12.05□□□□□ -0.48
SEMA4D-202ENST00000356444 CCDC144AA2RUR9 1427 aa12.05□□□□□ -0.48
SEMA4D-202ENST00000356444 CCDC27Q2M243 656 aa12.05□□□□□ -0.48
SEMA4D-202ENST00000356444 CCDC112Q8NEF3 446 aa12.05□□□□□ -0.48
SEMA4D-202ENST00000356444 GPATCH3Q96I76 525 aa12.05□□□□□ -0.48
SEMA4D-202ENST00000356444 RRAGDQ9NQL2 400 aaPredicted RBP12.05□□□□□ -0.48
SEMA4D-202ENST00000356444 TOP2AP11388 1531 aaKnown RBP12.05□□□□□ -0.48
SEMA4D-202ENST00000356444 SYCE3A1L190 88 aa12.04□□□□□ -0.48
SEMA4D-202ENST00000356444 FIBPO43427 364 aa12.04□□□□□ -0.48
SEMA4D-202ENST00000356444 KANK1Q14678 1352 aa12.04□□□□□ -0.48
SEMA4D-202ENST00000356444 CWC15Q9P013 229 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-202ENST00000356444 GORABQ5T7V8 394 aa12.03□□□□□ -0.48
SEMA4D-202ENST00000356444 TERF2IPQ9NYB0 399 aa12.03□□□□□ -0.48
SEMA4D-202ENST00000356444 LMOD3Q0VAK6 560 aa12.03□□□□□ -0.48
SEMA4D-202ENST00000356444 TNPO1Q92973 898 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-202ENST00000356444 LRRC9Q6ZRR7 1453 aa12.02□□□□□ -0.48
SEMA4D-202ENST00000356444 BBXQ8WY36 941 aaPredicted RBP12.02□□□□□ -0.48
SEMA4D-202ENST00000356444 API5Q9BZZ5 524 aaKnown RBP12.02□□□□□ -0.48
SEMA4D-202ENST00000356444 ZKSCAN1P17029 563 aaPredicted RBP12.02□□□□□ -0.49
SEMA4D-202ENST00000356444 TDRD9Q8NDG6 1382 aaKnown RBP12.02□□□□□ -0.49
SEMA4D-202ENST00000356444 HSP90B2PQ58FF3 399 aa12.02□□□□□ -0.49
SEMA4D-202ENST00000356444 CCDC34Q96HJ3 373 aa12.02□□□□□ -0.49
SEMA4D-202ENST00000356444 PDE4CQ08493 712 aa12.01□□□□□ -0.49
SEMA4D-202ENST00000356444 TAF3Q5VWG9 929 aa12.01□□□□□ -0.49
SEMA4D-202ENST00000356444 CWC22Q9HCG8 908 aaKnown RBP12.01□□□□□ -0.49
SEMA4D-202ENST00000356444 LETM1O95202 739 aaPredicted RBP12.01□□□□□ -0.49
SEMA4D-202ENST00000356444 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.01□□□□□ -0.49
SEMA4D-202ENST00000356444 TRERF1Q96PN7 1200 aa12.01□□□□□ -0.49
SEMA4D-202ENST00000356444 GGT6Q6P531 493 aa12.01□□□□□ -0.49
SEMA4D-202ENST00000356444 C1orf115Q9H7X2 142 aa12.01□□□□□ -0.49
SEMA4D-202ENST00000356444 ARAP1Q96P48 1450 aa12.01□□□□□ -0.49
SEMA4D-202ENST00000356444 SPAG9O60271 1321 aaKnown RBP12.01□□□□□ -0.49
SEMA4D-202ENST00000356444 ZNF644Q9H582 1327 aaPredicted RBP12.01□□□□□ -0.49
SEMA4D-202ENST00000356444 LMOD2Q6P5Q4 547 aa12□□□□□ -0.49
SEMA4D-202ENST00000356444 SPDYE4A6NLX3 237 aa12□□□□□ -0.49
SEMA4D-202ENST00000356444 EXOSC9Q06265 439 aaKnown RBP12□□□□□ -0.49
SEMA4D-202ENST00000356444 NUTM2DQ5VT03 806 aaPredicted RBP12□□□□□ -0.49
SEMA4D-202ENST00000356444 PES1O00541 588 aaKnown RBP11.99□□□□□ -0.49
SEMA4D-202ENST00000356444 SKIDA1Q1XH10 827 aa11.99□□□□□ -0.49
SEMA4D-202ENST00000356444 PPP4R3BQ5MIZ7 849 aa11.99□□□□□ -0.49
SEMA4D-202ENST00000356444 SSFA2P28290 1259 aa11.99□□□□□ -0.49
SEMA4D-202ENST00000356444 AEBP1Q8IUX7 1158 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms