RNA–Protein interactions for RNA: ENST00000356073.8

TCF4-202, Transcript of transcription factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF4, Length 8,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-202ENST00000356073 TSPYL1Q9H0U9 437 aa13.77□□□□□ -0.21
TCF4-202ENST00000356073 GOLGA6L19H0YKK7 550 aa13.76□□□□□ -0.21
TCF4-202ENST00000356073 CHMP4CQ96CF2 233 aa13.76□□□□□ -0.21
TCF4-202ENST00000356073 IPO9Q96P70 1041 aaKnown RBP13.76□□□□□ -0.21
TCF4-202ENST00000356073 CCDC173Q0VFZ6 552 aa13.76□□□□□ -0.21
TCF4-202ENST00000356073 FOXD4L5Q5VV16 416 aaPredicted RBP13.76□□□□□ -0.21
TCF4-202ENST00000356073 FOXD4L4Q8WXT5 416 aaPredicted RBP13.76□□□□□ -0.21
TCF4-202ENST00000356073 TCHHQ07283 1943 aa13.76□□□□□ -0.21
TCF4-202ENST00000356073 RRP9O43818 475 aaKnown RBP13.75□□□□□ -0.21
TCF4-202ENST00000356073 HSP90AB4PQ58FF6 505 aa13.75□□□□□ -0.21
TCF4-202ENST00000356073 RUFY1Q96T51 708 aa13.75□□□□□ -0.21
TCF4-202ENST00000356073 BECN2A8MW95 431 aa13.75□□□□□ -0.21
TCF4-202ENST00000356073 NEXNQ0ZGT2 675 aa13.75□□□□□ -0.21
TCF4-202ENST00000356073 TRDNQ13061 729 aa13.75□□□□□ -0.21
TCF4-202ENST00000356073 MIER1Q8N108 512 aa13.74□□□□□ -0.21
TCF4-202ENST00000356073 SYCP1Q15431 976 aa13.74□□□□□ -0.21
TCF4-202ENST00000356073 CPLX1O14810 134 aa13.74□□□□□ -0.21
TCF4-202ENST00000356073 ATP2B2Q01814 1243 aa13.74□□□□□ -0.21
TCF4-202ENST00000356073 RSPH4AQ5TD94 716 aa13.74□□□□□ -0.21
TCF4-202ENST00000356073 ARGLU1Q9NWB6 273 aaPredicted RBP13.74□□□□□ -0.21
TCF4-202ENST00000356073 GRIPAP1Q4V328 841 aa13.73□□□□□ -0.21
TCF4-202ENST00000356073 ANKRD12Q6UB98 2062 aa13.73□□□□□ -0.21
TCF4-202ENST00000356073 MYH11P35749 1972 aa13.72□□□□□ -0.21
TCF4-202ENST00000356073 PDCL3Q9H2J4 239 aa13.72□□□□□ -0.21
TCF4-202ENST00000356073 RBM5P52756 815 aaKnown RBP eCLIP13.72□□□□□ -0.21
TCF4-202ENST00000356073 SLKQ9H2G2 1235 aaPredicted RBP13.72□□□□□ -0.21
TCF4-202ENST00000356073 INCENPQ9NQS7 918 aa13.71□□□□□ -0.21
TCF4-202ENST00000356073 DCAF11Q8TEB1 546 aa13.71□□□□□ -0.21
TCF4-202ENST00000356073 TEFQ10587 303 aa13.71□□□□□ -0.21
TCF4-202ENST00000356073 GRM1Q13255 1194 aa13.71□□□□□ -0.21
TCF4-202ENST00000356073 SKIDA1Q1XH10 827 aa13.71□□□□□ -0.22
TCF4-202ENST00000356073 HOOK1Q9UJC3 728 aaKnown RBP13.71□□□□□ -0.22
TCF4-202ENST00000356073 ATP6V1DQ9Y5K8 247 aa13.71□□□□□ -0.22
TCF4-202ENST00000356073 RILPL2Q969X0 211 aa13.7□□□□□ -0.22
TCF4-202ENST00000356073 TTLL12Q14166 644 aaPredicted RBP13.7□□□□□ -0.22
TCF4-202ENST00000356073 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.7□□□□□ -0.22
TCF4-202ENST00000356073 MATR3P43243 847 aaKnown RBP eCLIP13.7□□□□□ -0.225e-7■■■■■ 29.7
TCF4-202ENST00000356073 DIAPH3Q9NSV4 1193 aa13.7□□□□□ -0.22
TCF4-202ENST00000356073 TRIM21P19474 475 aaKnown RBP13.7□□□□□ -0.22
TCF4-202ENST00000356073 GSE1Q14687 1217 aa13.7□□□□□ -0.22
TCF4-202ENST00000356073 ZNF710Q8N1W2 664 aa13.7□□□□□ -0.22
TCF4-202ENST00000356073 RFX1P22670 979 aa13.7□□□□□ -0.22
TCF4-202ENST00000356073 EEA1Q15075 1411 aa13.7□□□□□ -0.22
TCF4-202ENST00000356073 FOXD4L1Q9NU39 408 aa13.7□□□□□ -0.22
TCF4-202ENST00000356073 CFAP65Q6ZU64 1925 aaKnown RBP13.69□□□□□ -0.22
TCF4-202ENST00000356073 NUTM2DQ5VT03 806 aaPredicted RBP13.69□□□□□ -0.22
TCF4-202ENST00000356073 DRC1Q96MC2 740 aa13.69□□□□□ -0.22
TCF4-202ENST00000356073 FAM177BA6PVY3 158 aa13.69□□□□□ -0.22
TCF4-202ENST00000356073 C9orf78Q9NZ63 289 aaPredicted RBP13.68□□□□□ -0.22
TCF4-202ENST00000356073 FOXD4L6Q3SYB3 417 aaPredicted RBP13.68□□□□□ -0.22
TCF4-202ENST00000356073 FOXD4L3Q6VB84 417 aaPredicted RBP13.68□□□□□ -0.22
TCF4-202ENST00000356073 PLIN1O60240 522 aa13.68□□□□□ -0.22
TCF4-202ENST00000356073 PLCD4Q9BRC7 762 aa13.68□□□□□ -0.22
TCF4-202ENST00000356073 DHX8Q14562 1220 aaKnown RBP13.68□□□□□ -0.22
TCF4-202ENST00000356073 SEPT7Q16181 437 aaKnown RBP13.67□□□□□ -0.22
TCF4-202ENST00000356073 PSMD1Q99460 953 aa13.67□□□□□ -0.22
TCF4-202ENST00000356073 DEF6Q9H4E7 631 aa13.67□□□□□ -0.22
TCF4-202ENST00000356073 NUTM2BA6NNL0 878 aaPredicted RBP13.67□□□□□ -0.22
TCF4-202ENST00000356073 NUTM2EB1AL46 878 aaPredicted RBP13.67□□□□□ -0.22
TCF4-202ENST00000356073 EIF2S2P20042 333 aaKnown RBP13.67□□□□□ -0.22
TCF4-202ENST00000356073 NOP2P46087 812 aaKnown RBP13.67□□□□□ -0.22
TCF4-202ENST00000356073 HSP90B2PQ58FF3 399 aa13.67□□□□□ -0.22
TCF4-202ENST00000356073 NUTM2AQ8IVF1 878 aaPredicted RBP13.67□□□□□ -0.22
TCF4-202ENST00000356073 PSME1Q06323 249 aa13.66□□□□□ -0.22
TCF4-202ENST00000356073 ANKRD18AQ8IVF6 992 aa13.66□□□□□ -0.22
TCF4-202ENST00000356073 ATF3P18847 181 aa13.66□□□□□ -0.22
TCF4-202ENST00000356073 DESP17661 470 aa13.66□□□□□ -0.22
TCF4-202ENST00000356073 SCLT1Q96NL6 688 aa13.66□□□□□ -0.22
TCF4-202ENST00000356073 CCER2I3L3R5 266 aa13.66□□□□□ -0.22
TCF4-202ENST00000356073 KRT18P05783 430 aaKnown RBP13.66□□□□□ -0.22
TCF4-202ENST00000356073 HMGB1P1B2RPK0 211 aaPredicted RBP13.66□□□□□ -0.22
TCF4-202ENST00000356073 ZNF592Q92610 1267 aa13.66□□□□□ -0.22
TCF4-202ENST00000356073 MFAP1P55081 439 aaKnown RBP13.65□□□□□ -0.22
TCF4-202ENST00000356073 MYO6Q9UM54 1294 aa13.65□□□□□ -0.22
TCF4-202ENST00000356073 RSF1Q96T23 1441 aaPredicted RBP13.65□□□□□ -0.22
TCF4-202ENST00000356073 SAFBQ15424 915 aaKnown RBP eCLIP13.64□□□□□ -0.23
TCF4-202ENST00000356073 CDK5RAP3Q96JB5 506 aa13.64□□□□□ -0.23
TCF4-202ENST00000356073 STAC3Q96MF2 364 aa13.64□□□□□ -0.23
TCF4-202ENST00000356073 DYDC1Q8WWB3 177 aa13.64□□□□□ -0.23
TCF4-202ENST00000356073 WDR78Q5VTH9 848 aa13.64□□□□□ -0.23
TCF4-202ENST00000356073 CRBNQ96SW2 442 aa13.64□□□□□ -0.23
TCF4-202ENST00000356073 BRMS1Q9HCU9 246 aa13.64□□□□□ -0.23
TCF4-202ENST00000356073 PHLDB1Q86UU1 1377 aa13.64□□□□□ -0.23
TCF4-202ENST00000356073 PIP4K2BP78356 416 aa13.64□□□□□ -0.23
TCF4-202ENST00000356073 RWDD1Q9H446 243 aaPredicted RBP13.64□□□□□ -0.23
TCF4-202ENST00000356073 TERF2IPQ9NYB0 399 aa13.64□□□□□ -0.23
TCF4-202ENST00000356073 ERCC4Q92889 916 aaPredicted RBP13.63□□□□□ -0.23
TCF4-202ENST00000356073 C16orf71Q8IYS4 520 aaPredicted RBP13.63□□□□□ -0.23
TCF4-202ENST00000356073 PDIA4P13667 645 aaKnown RBP13.63□□□□□ -0.23
TCF4-202ENST00000356073 EZRP15311 586 aaKnown RBP13.62□□□□□ -0.23
TCF4-202ENST00000356073 FANCIQ9NVI1 1328 aa13.62□□□□□ -0.23
TCF4-202ENST00000356073 SSR1P43307 286 aaKnown RBP13.62□□□□□ -0.23
TCF4-202ENST00000356073 FAM43AQ8N2R8 423 aa13.62□□□□□ -0.23
TCF4-202ENST00000356073 ST18O60284 1047 aa13.62□□□□□ -0.23
TCF4-202ENST00000356073 ZMYND15Q9H091 742 aa13.62□□□□□ -0.23
TCF4-202ENST00000356073 GOLGA6L7A0A1B0GV03 622 aa13.62□□□□□ -0.23
TCF4-202ENST00000356073 CAVIN1Q6NZI2 390 aaKnown RBP13.62□□□□□ -0.23
TCF4-202ENST00000356073 LMOD3Q0VAK6 560 aa13.61□□□□□ -0.23
TCF4-202ENST00000356073 HOMER2Q9NSB8 354 aa13.61□□□□□ -0.23
TCF4-202ENST00000356073 FOSBP53539 338 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms