RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 AMER1Q5JTC6 1135 aaPredicted RBP23.9■■□□□ 1.42
PDZD3-202ENST00000355547 PPP2R1AP30153 589 aa23.89■■□□□ 1.42
PDZD3-202ENST00000355547 KNSTRNQ9Y448 316 aa23.89■■□□□ 1.42
PDZD3-202ENST00000355547 SCAF11Q99590 1463 aaKnown RBP23.89■■□□□ 1.41
PDZD3-202ENST00000355547 PLIN1O60240 522 aa23.89■■□□□ 1.41
PDZD3-202ENST00000355547 CDCA8Q53HL2 280 aa23.89■■□□□ 1.41
PDZD3-202ENST00000355547 SYNMO15061 1565 aa23.88■■□□□ 1.41
PDZD3-202ENST00000355547 SPHKAPQ2M3C7 1700 aa23.88■■□□□ 1.41
PDZD3-202ENST00000355547 ARAP3Q8WWN8 1544 aa23.86■■□□□ 1.41
PDZD3-202ENST00000355547 CRBNQ96SW2 442 aa23.86■■□□□ 1.41
PDZD3-202ENST00000355547 SPAG9O60271 1321 aaKnown RBP23.86■■□□□ 1.41
PDZD3-202ENST00000355547 NBR1Q14596 966 aa23.86■■□□□ 1.41
PDZD3-202ENST00000355547 NPC1L1Q9UHC9 1359 aa23.85■■□□□ 1.41
PDZD3-202ENST00000355547 CEP152O94986 1710 aa23.85■■□□□ 1.41
PDZD3-202ENST00000355547 ZNF521Q96K83 1311 aa23.84■■□□□ 1.41
PDZD3-202ENST00000355547 DEPDC5O75140 1603 aa23.84■■□□□ 1.41
PDZD3-202ENST00000355547 ZFYVE16Q7Z3T8 1539 aa23.84■■□□□ 1.41
PDZD3-202ENST00000355547 PIK3C2GO75747 1445 aa23.83■■□□□ 1.41
PDZD3-202ENST00000355547 PLEKHH1Q9ULM0 1364 aa23.83■■□□□ 1.4
PDZD3-202ENST00000355547 ASXL1Q8IXJ9 1541 aa23.83■■□□□ 1.4
PDZD3-202ENST00000355547 CLTCL1P53675 1640 aa23.82■■□□□ 1.4
PDZD3-202ENST00000355547 DUSP27Q5VZP5 1158 aa23.81■■□□□ 1.4
PDZD3-202ENST00000355547 WDR43Q15061 677 aaKnown RBP eCLIP23.81■■□□□ 1.4
PDZD3-202ENST00000355547 FAM69CQ0P6D2 419 aa23.8■■□□□ 1.4
PDZD3-202ENST00000355547 NEURL4Q96JN8 1562 aa23.8■■□□□ 1.4
PDZD3-202ENST00000355547 TET3O43151 1660 aa23.8■■□□□ 1.4
PDZD3-202ENST00000355547 AFAP1Q8N556 730 aa23.79■■□□□ 1.4
PDZD3-202ENST00000355547 VWDEQ8N2E2 1590 aa23.79■■□□□ 1.4
PDZD3-202ENST00000355547 KIAA1210Q9ULL0 1709 aa23.78■■□□□ 1.4
PDZD3-202ENST00000355547 ABCA9Q8IUA7 1624 aa23.77■■□□□ 1.4
PDZD3-202ENST00000355547 EIF3AQ14152 1382 aaKnown RBP23.77■■□□□ 1.4
PDZD3-202ENST00000355547 C20orf194Q5TEA3 1177 aa23.77■■□□□ 1.4
PDZD3-202ENST00000355547 KDM2BQ8NHM5 1336 aa23.77■■□□□ 1.4
PDZD3-202ENST00000355547 MYOM1P52179 1685 aa23.77■■□□□ 1.4
PDZD3-202ENST00000355547 DIP2BQ9P265 1576 aa23.76■■□□□ 1.39
PDZD3-202ENST00000355547 GOLGA2Q08379 1002 aa23.76■■□□□ 1.39
PDZD3-202ENST00000355547 NPM2Q86SE8 214 aaKnown RBP23.76■■□□□ 1.39
PDZD3-202ENST00000355547 TRMT2AQ8IZ69 625 aaKnown RBP23.73■■□□□ 1.39
PDZD3-202ENST00000355547 SLC24A1O60721 1099 aa23.73■■□□□ 1.39
PDZD3-202ENST00000355547 KANK1Q14678 1352 aa23.73■■□□□ 1.39
PDZD3-202ENST00000355547 SLFN5Q08AF3 891 aa23.72■■□□□ 1.39
PDZD3-202ENST00000355547 RTL5Q5HYW3 569 aaPredicted RBP23.72■■□□□ 1.39
PDZD3-202ENST00000355547 CD109Q6YHK3 1445 aa23.72■■□□□ 1.39
PDZD3-202ENST00000355547 INO80Q9ULG1 1556 aaPredicted RBP23.71■■□□□ 1.39
PDZD3-202ENST00000355547 KIF13AQ9H1H9 1805 aa23.71■■□□□ 1.39
PDZD3-202ENST00000355547 CENPQQ7L2Z9 268 aaPredicted RBP23.7■■□□□ 1.38
PDZD3-202ENST00000355547 ATP7AQ04656 1500 aa23.7■■□□□ 1.38
PDZD3-202ENST00000355547 MYOM2P54296 1465 aa23.69■■□□□ 1.38
PDZD3-202ENST00000355547 KDM5AP29375 1690 aaKnown RBP23.69■■□□□ 1.38
PDZD3-202ENST00000355547 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.68■■□□□ 1.38
PDZD3-202ENST00000355547 TRHP20396 242 aaPredicted RBP23.68■■□□□ 1.38
PDZD3-202ENST00000355547 TSPOAP1O95153 1857 aa23.68■■□□□ 1.38
PDZD3-202ENST00000355547 GLI2P10070 1586 aa23.67■■□□□ 1.38
PDZD3-202ENST00000355547 MAP3K4Q9Y6R4 1608 aa23.66■■□□□ 1.38
PDZD3-202ENST00000355547 SKAP1Q86WV1 359 aa23.66■■□□□ 1.38
PDZD3-202ENST00000355547 ERVK-7P63135 1459 aa23.66■■□□□ 1.38
PDZD3-202ENST00000355547 FANCAO15360 1455 aa23.64■■□□□ 1.38
PDZD3-202ENST00000355547 MROH1Q8NDA8 1641 aa23.64■■□□□ 1.37
PDZD3-202ENST00000355547 NGEFQ8N5V2 710 aa23.64■■□□□ 1.37
PDZD3-202ENST00000355547 DDRGK1Q96HY6 314 aa23.64■■□□□ 1.37
PDZD3-202ENST00000355547 USP35Q9P2H5 1018 aa23.64■■□□□ 1.37
PDZD3-202ENST00000355547 KIF3BO15066 747 aa23.63■■□□□ 1.37
PDZD3-202ENST00000355547 CFAP70Q5T0N1 1121 aa23.63■■□□□ 1.37
PDZD3-202ENST00000355547 ABCA6Q8N139 1617 aa23.63■■□□□ 1.37
PDZD3-202ENST00000355547 NKTRP30414 1462 aaKnown RBP23.61■■□□□ 1.37
PDZD3-202ENST00000355547 CARD14Q9BXL6 1004 aa23.61■■□□□ 1.37
PDZD3-202ENST00000355547 ADGRF5Q8IZF2 1346 aa23.6■■□□□ 1.37
PDZD3-202ENST00000355547 SBNO2Q9Y2G9 1366 aa23.6■■□□□ 1.37
PDZD3-202ENST00000355547 NRXN1Q9ULB1 1477 aa23.6■■□□□ 1.37
PDZD3-202ENST00000355547 APAF1O14727 1248 aa23.6■■□□□ 1.37
PDZD3-202ENST00000355547 CCDC146Q8IYE0 955 aa23.6■■□□□ 1.37
PDZD3-202ENST00000355547 PPM1GO15355 546 aaPredicted RBP23.59■■□□□ 1.37
PDZD3-202ENST00000355547 SPINK5Q9NQ38 1064 aaPredicted RBP23.59■■□□□ 1.37
PDZD3-202ENST00000355547 UGGT1Q9NYU2 1555 aa23.58■■□□□ 1.37
PDZD3-202ENST00000355547 E9PSI1 815 aa23.58■■□□□ 1.36
PDZD3-202ENST00000355547 IFT172Q9UG01 1749 aa23.57■■□□□ 1.36
PDZD3-202ENST00000355547 MYO3AQ8NEV4 1616 aa23.57■■□□□ 1.36
PDZD3-202ENST00000355547 EFCAB6Q5THR3 1501 aa23.57■■□□□ 1.36
PDZD3-202ENST00000355547 ADGRL1O94910 1474 aa23.57■■□□□ 1.36
PDZD3-202ENST00000355547 PPRC1Q5VV67 1664 aaKnown RBP23.57■■□□□ 1.36
PDZD3-202ENST00000355547 FAM161AQ3B820 660 aa23.56■■□□□ 1.36
PDZD3-202ENST00000355547 LAS1LQ9Y4W2 734 aaKnown RBP23.56■■□□□ 1.36
PDZD3-202ENST00000355547 KIF1BO60333 1816 aa23.56■■□□□ 1.36
PDZD3-202ENST00000355547 POLR3AO14802 1390 aaPredicted RBP23.55■■□□□ 1.36
PDZD3-202ENST00000355547 LMTK2Q8IWU2 1503 aa23.54■■□□□ 1.36
PDZD3-202ENST00000355547 NEFMP07197 916 aa23.54■■□□□ 1.36
PDZD3-202ENST00000355547 C8orf34Q49A92 452 aa23.53■■□□□ 1.36
PDZD3-202ENST00000355547 SETBP1Q9Y6X0 1596 aa23.51■■□□□ 1.35
PDZD3-202ENST00000355547 BCAR3O75815 825 aa23.5■■□□□ 1.35
PDZD3-202ENST00000355547 DMRT2Q9Y5R5 561 aa23.49■■□□□ 1.35
PDZD3-202ENST00000355547 MROH2AA6NES4 1674 aa23.49■■□□□ 1.35
PDZD3-202ENST00000355547 ADGRB3O60242 1522 aa23.48■■□□□ 1.35
PDZD3-202ENST00000355547 PDE3AQ14432 1141 aa23.48■■□□□ 1.35
PDZD3-202ENST00000355547 CENPJQ9HC77 1338 aaPredicted RBP23.48■■□□□ 1.35
PDZD3-202ENST00000355547 KIDINS220Q9ULH0 1771 aa23.47■■□□□ 1.35
PDZD3-202ENST00000355547 NINLQ9Y2I6 1382 aa23.47■■□□□ 1.35
PDZD3-202ENST00000355547 NEO1Q92859 1461 aa23.46■■□□□ 1.35
PDZD3-202ENST00000355547 WWC1Q8IX03 1113 aa23.46■■□□□ 1.35
PDZD3-202ENST00000355547 RAPGEF3O95398 923 aa23.45■■□□□ 1.35
PDZD3-202ENST00000355547 ANO8Q9HCE9 1232 aaPredicted RBP23.45■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms