RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 IRX6P78412 446 aaPredicted RBP9.69□□□□□ -0.86
HTT-201ENST00000355072 HSP90AB4PQ58FF6 505 aa9.69□□□□□ -0.86
HTT-201ENST00000355072 GBP3Q9H0R5 595 aa9.69□□□□□ -0.86
HTT-201ENST00000355072 NF2P35240 595 aa9.69□□□□□ -0.86
HTT-201ENST00000355072 AXDND1Q5T1B0 1012 aaPredicted RBP9.69□□□□□ -0.86
HTT-201ENST00000355072 SMARCE1Q969G3 411 aa9.69□□□□□ -0.86
HTT-201ENST00000355072 INTS3Q68E01 1043 aaKnown RBP9.68□□□□□ -0.86
HTT-201ENST00000355072 DNAJC2Q99543 621 aaKnown RBP9.68□□□□□ -0.86
HTT-201ENST00000355072 FAM13BQ9NYF5 915 aa9.68□□□□□ -0.86
HTT-201ENST00000355072 BRD4O60885 1362 aaPredicted RBP9.68□□□□□ -0.86
HTT-201ENST00000355072 PSMA5P28066 241 aa9.68□□□□□ -0.86
HTT-201ENST00000355072 AKNAQ7Z591 1439 aa9.68□□□□□ -0.86
HTT-201ENST00000355072 TPD52L1Q16890 204 aaPredicted RBP9.68□□□□□ -0.86
HTT-201ENST00000355072 DHX16O60231 1041 aaKnown RBP9.68□□□□□ -0.86
HTT-201ENST00000355072 AEBP1Q8IUX7 1158 aa9.68□□□□□ -0.86
HTT-201ENST00000355072 ITPRIPQ8IWB1 547 aa9.68□□□□□ -0.86
HTT-201ENST00000355072 POTEB2H3BUK9 544 aa9.68□□□□□ -0.86
HTT-201ENST00000355072 HDGFL2Q7Z4V5 671 aaPredicted RBP9.68□□□□□ -0.86
HTT-201ENST00000355072 RRBP1Q9P2E9 1410 aaKnown RBP9.67□□□□□ -0.86
HTT-201ENST00000355072 HIP1O00291 1037 aa9.67□□□□□ -0.86
HTT-201ENST00000355072 EZRP15311 586 aaKnown RBP9.67□□□□□ -0.86
HTT-201ENST00000355072 A6NNZ2 444 aa9.67□□□□□ -0.86
HTT-201ENST00000355072 TUBB8Q3ZCM7 444 aa9.67□□□□□ -0.86
HTT-201ENST00000355072 MICALCLQ6ZW33 695 aa9.67□□□□□ -0.86
HTT-201ENST00000355072 JMYQ8N9B5 988 aa9.67□□□□□ -0.86
HTT-201ENST00000355072 BRMS1Q9HCU9 246 aa9.67□□□□□ -0.86
HTT-201ENST00000355072 RAB3GAP2Q9H2M9 1393 aa9.66□□□□□ -0.86
HTT-201ENST00000355072 FYCO1Q9BQS8 1478 aa9.66□□□□□ -0.86
HTT-201ENST00000355072 PDE4AP27815 886 aa9.66□□□□□ -0.86
HTT-201ENST00000355072 UBE2Q2Q8WVN8 375 aa9.66□□□□□ -0.86
HTT-201ENST00000355072 SASS6Q6UVJ0 657 aa9.66□□□□□ -0.86
HTT-201ENST00000355072 RRP1P56182 461 aaKnown RBP9.66□□□□□ -0.86
HTT-201ENST00000355072 IFT57Q9NWB7 429 aa9.65□□□□□ -0.86
HTT-201ENST00000355072 KAT6BQ8WYB5 2073 aa9.65□□□□□ -0.86
HTT-201ENST00000355072 SMC4Q9NTJ3 1288 aa9.65□□□□□ -0.86
HTT-201ENST00000355072 DACH1Q9UI36 760 aa9.65□□□□□ -0.86
HTT-201ENST00000355072 SPATA24Q86W54 205 aa9.65□□□□□ -0.87
HTT-201ENST00000355072 DDX12PQ92771 950 aa9.65□□□□□ -0.87
HTT-201ENST00000355072 ITSN2Q9NZM3 1697 aa9.65□□□□□ -0.87
HTT-201ENST00000355072 HECW1Q76N89 1606 aa9.65□□□□□ -0.87
HTT-201ENST00000355072 ERC2O15083 957 aa9.65□□□□□ -0.87
HTT-201ENST00000355072 HS1BP3Q53T59 392 aa9.64□□□□□ -0.87
HTT-201ENST00000355072 XBP1P17861 261 aa9.64□□□□□ -0.87
HTT-201ENST00000355072 SSR1P43307 286 aaKnown RBP9.64□□□□□ -0.87
HTT-201ENST00000355072 TRIM29Q14134 588 aa9.64□□□□□ -0.87
HTT-201ENST00000355072 DYNC1I1O14576 645 aa9.64□□□□□ -0.87
HTT-201ENST00000355072 SF3A1Q15459 793 aaKnown RBP9.64□□□□□ -0.87
HTT-201ENST00000355072 CREBRFQ8IUR6 639 aa9.64□□□□□ -0.87
HTT-201ENST00000355072 AMOTL1Q8IY63 956 aa9.64□□□□□ -0.87
HTT-201ENST00000355072 CCDC192P0DO97 292 aa9.64□□□□□ -0.87
HTT-201ENST00000355072 MORC1Q86VD1 984 aa9.64□□□□□ -0.87
HTT-201ENST00000355072 IVLP07476 585 aa9.64□□□□□ -0.87
HTT-201ENST00000355072 HMGB3O15347 200 aaKnown RBP9.64□□□□□ -0.87
HTT-201ENST00000355072 NEMFO60524 1076 aa9.64□□□□□ -0.87
HTT-201ENST00000355072 GOLGA6L9A6NEM1 432 aa9.63□□□□□ -0.87
HTT-201ENST00000355072 RASSF8Q8NHQ8 419 aa9.63□□□□□ -0.87
HTT-201ENST00000355072 PRDM2Q13029 1718 aa9.63□□□□□ -0.87
HTT-201ENST00000355072 CCDC73Q6ZRK6 1079 aa9.63□□□□□ -0.87
HTT-201ENST00000355072 PRIMPOLQ96LW4 560 aa9.63□□□□□ -0.87
HTT-201ENST00000355072 EHBP1L1Q8N3D4 1523 aa9.63□□□□□ -0.87
HTT-201ENST00000355072 ZNHIT6Q9NWK9 470 aaKnown RBP9.62□□□□□ -0.87
HTT-201ENST00000355072 SLC26A8Q96RN1 970 aa9.62□□□□□ -0.87
HTT-201ENST00000355072 CUL7Q14999 1698 aa9.62□□□□□ -0.87
HTT-201ENST00000355072 CBFA2T2O43439 604 aa9.62□□□□□ -0.87
HTT-201ENST00000355072 RAPGEF2Q9Y4G8 1499 aa9.62□□□□□ -0.87
HTT-201ENST00000355072 TUBBP07437 444 aa9.62□□□□□ -0.87
HTT-201ENST00000355072 ANKRD1Q15327 319 aa9.62□□□□□ -0.87
HTT-201ENST00000355072 PLPPR3Q6T4P5 718 aa9.62□□□□□ -0.87
HTT-201ENST00000355072 CHMP7Q8WUX9 453 aaPredicted RBP9.62□□□□□ -0.87
HTT-201ENST00000355072 CCDC88BA6NC98 1476 aa9.62□□□□□ -0.87
HTT-201ENST00000355072 AEBP2Q6ZN18 517 aaPredicted RBP9.62□□□□□ -0.87
HTT-201ENST00000355072 TMX4Q9H1E5 349 aaPredicted RBP9.62□□□□□ -0.87
HTT-201ENST00000355072 PPM1EQ8WY54 764 aa9.62□□□□□ -0.87
HTT-201ENST00000355072 CGNQ9P2M7 1197 aaKnown RBP9.61□□□□□ -0.87
HTT-201ENST00000355072 KDM2AQ9Y2K7 1162 aa9.61□□□□□ -0.87
HTT-201ENST00000355072 FYB1O15117 783 aa9.61□□□□□ -0.87
HTT-201ENST00000355072 TTLL5Q6EMB2 1281 aa9.61□□□□□ -0.87
HTT-201ENST00000355072 POGKQ9P215 609 aa9.61□□□□□ -0.87
HTT-201ENST00000355072 DAPK1P53355 1430 aa9.61□□□□□ -0.87
HTT-201ENST00000355072 CHGAP10645 457 aaKnown RBP9.61□□□□□ -0.87
HTT-201ENST00000355072 USH1CQ9Y6N9 552 aa9.61□□□□□ -0.87
HTT-201ENST00000355072 NPHP1O15259 732 aa9.61□□□□□ -0.87
HTT-201ENST00000355072 ZSCAN30Q86W11 494 aa9.61□□□□□ -0.87
HTT-201ENST00000355072 SETSIPP0DME0 302 aa9.6□□□□□ -0.87
HTT-201ENST00000355072 AKAP17AQ02040 695 aaKnown RBP9.6□□□□□ -0.87
HTT-201ENST00000355072 SYNE3Q6ZMZ3 975 aa9.6□□□□□ -0.87
HTT-201ENST00000355072 SHTN1A0MZ66 631 aa9.6□□□□□ -0.87
HTT-201ENST00000355072 FAM193AP78312 1265 aa9.6□□□□□ -0.87
HTT-201ENST00000355072 KINO60870 393 aaKnown RBP9.6□□□□□ -0.87
HTT-201ENST00000355072 USP47Q96K76 1375 aa9.6□□□□□ -0.87
HTT-201ENST00000355072 DNAAF4Q8WXU2 420 aa9.6□□□□□ -0.87
HTT-201ENST00000355072 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.6□□□□□ -0.87
HTT-201ENST00000355072 ZKSCAN2Q63HK3 967 aa9.59□□□□□ -0.87
HTT-201ENST00000355072 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.59□□□□□ -0.872e-6■■■□□ 16.5
HTT-201ENST00000355072 TRIM6-TRIM34B2RNG4 842 aa9.59□□□□□ -0.87
HTT-201ENST00000355072 CLSTN1O94985 981 aa9.59□□□□□ -0.87
HTT-201ENST00000355072 GIMAP7Q8NHV1 300 aa9.59□□□□□ -0.87
HTT-201ENST00000355072 JAKMIP3Q5VZ66 844 aa9.59□□□□□ -0.87
HTT-201ENST00000355072 CHIC2Q9UKJ5 165 aa9.59□□□□□ -0.87
HTT-201ENST00000355072 CC2D1BQ5T0F9 858 aaKnown RBP9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms