RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 SMC4Q9NTJ3 1288 aa15.87■□□□□ 0.13
PCDHB11-201ENST00000354757 CABP1Q9NZU7 370 aa15.86■□□□□ 0.13
PCDHB11-201ENST00000354757 STAC3Q96MF2 364 aa15.85■□□□□ 0.13
PCDHB11-201ENST00000354757 NOP58Q9Y2X3 529 aaKnown RBP15.85■□□□□ 0.13
PCDHB11-201ENST00000354757 PSME1Q06323 249 aa15.85■□□□□ 0.13
PCDHB11-201ENST00000354757 ITPRIPQ8IWB1 547 aa15.85■□□□□ 0.13
PCDHB11-201ENST00000354757 CDCA7LQ96GN5 454 aa15.84■□□□□ 0.13
PCDHB11-201ENST00000354757 SYCP2Q9BX26 1530 aa15.84■□□□□ 0.13
PCDHB11-201ENST00000354757 CCDC9Q9Y3X0 531 aaKnown RBP15.83■□□□□ 0.13
PCDHB11-201ENST00000354757 TARBP1Q13395 1621 aaKnown RBP15.83■□□□□ 0.13
PCDHB11-201ENST00000354757 PLCH2O75038 1416 aa15.83■□□□□ 0.12
PCDHB11-201ENST00000354757 DIAPH1O60610 1272 aaKnown RBP15.82■□□□□ 0.12
PCDHB11-201ENST00000354757 CDK19Q9BWU1 502 aa15.82■□□□□ 0.12
PCDHB11-201ENST00000354757 NLRP6P59044 892 aa15.81■□□□□ 0.12
PCDHB11-201ENST00000354757 SLC4A10Q6U841 1118 aa15.81■□□□□ 0.12
PCDHB11-201ENST00000354757 ZBED9Q6R2W3 1325 aa15.81■□□□□ 0.12
PCDHB11-201ENST00000354757 PBRM1Q86U86 1689 aa15.81■□□□□ 0.12
PCDHB11-201ENST00000354757 PPP2R1AP30153 589 aa15.8■□□□□ 0.12
PCDHB11-201ENST00000354757 DENND4BO75064 1496 aaPredicted RBP15.8■□□□□ 0.12
PCDHB11-201ENST00000354757 CEP170Q5SW79 1584 aa15.8■□□□□ 0.12
PCDHB11-201ENST00000354757 THEMISQ8N1K5 641 aaPredicted RBP15.79■□□□□ 0.12
PCDHB11-201ENST00000354757 EXOC6Q8TAG9 804 aa15.79■□□□□ 0.12
PCDHB11-201ENST00000354757 NECTIN2Q92692 538 aa15.79■□□□□ 0.12
PCDHB11-201ENST00000354757 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
PCDHB11-201ENST00000354757 OS9Q13438 667 aaPredicted RBP15.79■□□□□ 0.12
PCDHB11-201ENST00000354757 DHX29Q7Z478 1369 aaKnown RBP15.78■□□□□ 0.12
PCDHB11-201ENST00000354757 MAPKBP1O60336 1514 aa15.78■□□□□ 0.12
PCDHB11-201ENST00000354757 RIPK4P57078 832 aa15.78■□□□□ 0.12
PCDHB11-201ENST00000354757 ESCO1Q5FWF5 840 aa15.78■□□□□ 0.12
PCDHB11-201ENST00000354757 RPRD2Q5VT52 1461 aaKnown RBP15.76■□□□□ 0.11
PCDHB11-201ENST00000354757 PROSER2Q86WR7 435 aaPredicted RBP15.76■□□□□ 0.11
PCDHB11-201ENST00000354757 WDR7Q9Y4E6 1490 aa15.76■□□□□ 0.11
PCDHB11-201ENST00000354757 MAGI3Q5TCQ9 1506 aa15.76■□□□□ 0.11
PCDHB11-201ENST00000354757 PDE3BQ13370 1112 aa15.76■□□□□ 0.11
PCDHB11-201ENST00000354757 COG6Q9Y2V7 657 aa15.76■□□□□ 0.11
PCDHB11-201ENST00000354757 MS4A1P11836 297 aa15.74■□□□□ 0.11
PCDHB11-201ENST00000354757 ABTB2Q8N961 1025 aa15.74■□□□□ 0.11
PCDHB11-201ENST00000354757 IPO8O15397 1037 aaKnown RBP15.74■□□□□ 0.11
PCDHB11-201ENST00000354757 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.74■□□□□ 0.11
PCDHB11-201ENST00000354757 NPHP1O15259 732 aa15.73■□□□□ 0.11
PCDHB11-201ENST00000354757 TCP11L2Q8N4U5 519 aa15.73■□□□□ 0.11
PCDHB11-201ENST00000354757 ATF3P18847 181 aa15.73■□□□□ 0.11
PCDHB11-201ENST00000354757 CALD1Q05682 793 aaKnown RBP15.72■□□□□ 0.11
PCDHB11-201ENST00000354757 NOS1P29475 1434 aa15.72■□□□□ 0.11
PCDHB11-201ENST00000354757 PNISRQ8TF01 805 aaKnown RBP15.72■□□□□ 0.11
PCDHB11-201ENST00000354757 CRBNQ96SW2 442 aa15.72■□□□□ 0.11
PCDHB11-201ENST00000354757 STK31Q9BXU1 1019 aa15.72■□□□□ 0.11
PCDHB11-201ENST00000354757 RRS1Q15050 365 aaKnown RBP15.72■□□□□ 0.11
PCDHB11-201ENST00000354757 USP35Q9P2H5 1018 aa15.72■□□□□ 0.11
PCDHB11-201ENST00000354757 KDM5BQ9UGL1 1544 aa15.71■□□□□ 0.11
PCDHB11-201ENST00000354757 TAOK2Q9UL54 1235 aa15.7■□□□□ 0.1
PCDHB11-201ENST00000354757 RRP1P56182 461 aaKnown RBP15.7■□□□□ 0.1
PCDHB11-201ENST00000354757 TPRNQ4KMQ1 711 aa15.7■□□□□ 0.1
PCDHB11-201ENST00000354757 ANKLE2Q86XL3 938 aa15.7■□□□□ 0.1
PCDHB11-201ENST00000354757 NGEFQ8N5V2 710 aa15.7■□□□□ 0.1
PCDHB11-201ENST00000354757 E9PSI1 815 aa15.7■□□□□ 0.1
PCDHB11-201ENST00000354757 FBLN1P23142 703 aa15.7■□□□□ 0.1
PCDHB11-201ENST00000354757 ABCC2Q92887 1545 aa15.69■□□□□ 0.1
PCDHB11-201ENST00000354757 RUNDC1Q96C34 613 aa15.69■□□□□ 0.1
PCDHB11-201ENST00000354757 EIF2S2P20042 333 aaKnown RBP15.69■□□□□ 0.1
PCDHB11-201ENST00000354757 MSH5O43196 834 aa15.69■□□□□ 0.1
PCDHB11-201ENST00000354757 PRKAR2BP31323 418 aa15.69■□□□□ 0.1
PCDHB11-201ENST00000354757 RPGRIP1LQ68CZ1 1315 aa15.68■□□□□ 0.1
PCDHB11-201ENST00000354757 BRD4O60885 1362 aaPredicted RBP15.67■□□□□ 0.1
PCDHB11-201ENST00000354757 RTEL1-TNFRSF6BF6WH68 1400 aa15.67■□□□□ 0.1
PCDHB11-201ENST00000354757 SPRYD3Q8NCJ5 442 aa15.67■□□□□ 0.1
PCDHB11-201ENST00000354757 CFAP43Q8NDM7 1665 aa15.67■□□□□ 0.1
PCDHB11-201ENST00000354757 TEFQ10587 303 aa15.67■□□□□ 0.1
PCDHB11-201ENST00000354757 SAMD9Q5K651 1589 aa15.67■□□□□ 0.1
PCDHB11-201ENST00000354757 NLRP2Q9NX02 1062 aa15.67■□□□□ 0.1
PCDHB11-201ENST00000354757 EVA1CP58658 441 aa15.66■□□□□ 0.1
PCDHB11-201ENST00000354757 LMOD3Q0VAK6 560 aa15.66■□□□□ 0.1
PCDHB11-201ENST00000354757 NUDT16Q96DE0 195 aaKnown RBP15.66■□□□□ 0.1
PCDHB11-201ENST00000354757 FANCIQ9NVI1 1328 aa15.66■□□□□ 0.1
PCDHB11-201ENST00000354757 A2MP01023 1474 aa15.66■□□□□ 0.1
PCDHB11-201ENST00000354757 TSR2Q969E8 191 aaKnown RBP15.65■□□□□ 0.1
PCDHB11-201ENST00000354757 TCOF1Q13428 1488 aaKnown RBP15.65■□□□□ 0.1
PCDHB11-201ENST00000354757 DISP3Q9P2K9 1392 aa15.65■□□□□ 0.1
PCDHB11-201ENST00000354757 CCDC61Q9Y6R9 512 aa15.65■□□□□ 0.1
PCDHB11-201ENST00000354757 POGZQ7Z3K3 1410 aa15.64■□□□□ 0.09
PCDHB11-201ENST00000354757 AMOTL2Q9Y2J4 779 aa15.64■□□□□ 0.09
PCDHB11-201ENST00000354757 SULT6B1Q6IMI4 303 aa15.64■□□□□ 0.09
PCDHB11-201ENST00000354757 NSD3Q9BZ95 1437 aa15.64■□□□□ 0.09
PCDHB11-201ENST00000354757 PANK1Q8TE04 598 aa15.63■□□□□ 0.09
PCDHB11-201ENST00000354757 CHMP4BQ9H444 224 aaKnown RBP15.63■□□□□ 0.09
PCDHB11-201ENST00000354757 C1orf141Q5JVX7 400 aa15.63■□□□□ 0.09
PCDHB11-201ENST00000354757 ZNF428Q96B54 188 aa15.63■□□□□ 0.09
PCDHB11-201ENST00000354757 SYTL4Q96C24 671 aaPredicted RBP15.63■□□□□ 0.09
PCDHB11-201ENST00000354757 RWDD1Q9H446 243 aaPredicted RBP15.63■□□□□ 0.09
PCDHB11-201ENST00000354757 NME9Q86XW9 330 aa15.62■□□□□ 0.09
PCDHB11-201ENST00000354757 CHMP3Q9Y3E7 222 aa15.62■□□□□ 0.09
PCDHB11-201ENST00000354757 ANO8Q9HCE9 1232 aaPredicted RBP15.62■□□□□ 0.09
PCDHB11-201ENST00000354757 ZNF518AQ6AHZ1 1483 aa15.62■□□□□ 0.09
PCDHB11-201ENST00000354757 C14orf93Q9H972 538 aaKnown RBP15.61■□□□□ 0.09
PCDHB11-201ENST00000354757 FOXO3O43524 673 aa15.61■□□□□ 0.09
PCDHB11-201ENST00000354757 FAM135AQ9P2D6 1515 aa15.61■□□□□ 0.09
PCDHB11-201ENST00000354757 PRKCSHP14314 528 aaPredicted RBP15.61■□□□□ 0.09
PCDHB11-201ENST00000354757 ZKSCAN2Q63HK3 967 aa15.6■□□□□ 0.09
PCDHB11-201ENST00000354757 ITSN2Q9NZM3 1697 aa15.6■□□□□ 0.09
PCDHB11-201ENST00000354757 ERCC6L2Q5T890 1561 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms