RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 KTN1Q86UP2 1357 aaKnown RBP9.74□□□□□ -0.85
SCN8A-201ENST00000354534 ERICH4A6NGS2 130 aa9.74□□□□□ -0.85
SCN8A-201ENST00000354534 SRPK2P78362 688 aaKnown RBP9.74□□□□□ -0.85
SCN8A-201ENST00000354534 CSB-PGBD3P0DP91 1061 aa9.73□□□□□ -0.85
SCN8A-201ENST00000354534 IBSPP21815 317 aaPredicted RBP9.73□□□□□ -0.85
SCN8A-201ENST00000354534 SAMD1Q6SPF0 538 aaPredicted RBP9.73□□□□□ -0.85
SCN8A-201ENST00000354534 TRIM34Q9BYJ4 488 aa9.73□□□□□ -0.85
SCN8A-201ENST00000354534 KANK1Q14678 1352 aa9.73□□□□□ -0.85
SCN8A-201ENST00000354534 HDAC5Q9UQL6 1122 aa9.72□□□□□ -0.85
SCN8A-201ENST00000354534 GBP2P32456 591 aaPredicted RBP9.72□□□□□ -0.85
SCN8A-201ENST00000354534 TNNT1P13805 278 aa9.72□□□□□ -0.85
SCN8A-201ENST00000354534 TMF1P82094 1093 aa9.72□□□□□ -0.85
SCN8A-201ENST00000354534 MLECQ14165 292 aa9.72□□□□□ -0.85
SCN8A-201ENST00000354534 CHMP4CQ96CF2 233 aa9.71□□□□□ -0.85
SCN8A-201ENST00000354534 MORC1Q86VD1 984 aa9.71□□□□□ -0.85
SCN8A-201ENST00000354534 SMC4Q9NTJ3 1288 aa9.71□□□□□ -0.86
SCN8A-201ENST00000354534 FOSBP53539 338 aa9.71□□□□□ -0.86
SCN8A-201ENST00000354534 OLFM4Q6UX06 510 aa9.71□□□□□ -0.86
SCN8A-201ENST00000354534 CEP164Q9UPV0 1460 aa9.71□□□□□ -0.86
SCN8A-201ENST00000354534 TSHZ2Q9NRE2 1034 aa9.71□□□□□ -0.86
SCN8A-201ENST00000354534 STK26Q9P289 416 aa9.71□□□□□ -0.86
SCN8A-201ENST00000354534 FAM193AP78312 1265 aa9.7□□□□□ -0.86
SCN8A-201ENST00000354534 IPO4Q8TEX9 1081 aaKnown RBP9.7□□□□□ -0.86
SCN8A-201ENST00000354534 PLEKHD1A6NEE1 506 aa9.7□□□□□ -0.86
SCN8A-201ENST00000354534 CCDC39Q9UFE4 941 aa9.7□□□□□ -0.86
SCN8A-201ENST00000354534 DDX23Q9BUQ8 820 aaKnown RBP9.7□□□□□ -0.86
SCN8A-201ENST00000354534 DHX16O60231 1041 aaKnown RBP9.7□□□□□ -0.86
SCN8A-201ENST00000354534 CPLX2Q6PUV4 134 aaKnown RBP9.7□□□□□ -0.86
SCN8A-201ENST00000354534 EIF3AQ14152 1382 aaKnown RBP9.7□□□□□ -0.86
SCN8A-201ENST00000354534 CHMP7Q8WUX9 453 aaPredicted RBP9.7□□□□□ -0.86
SCN8A-201ENST00000354534 STK31Q9BXU1 1019 aa9.69□□□□□ -0.86
SCN8A-201ENST00000354534 AMOTL1Q8IY63 956 aa9.69□□□□□ -0.86
SCN8A-201ENST00000354534 NAT10Q9H0A0 1025 aaKnown RBP9.69□□□□□ -0.86
SCN8A-201ENST00000354534 EIF3JO75822 258 aaKnown RBP9.69□□□□□ -0.86
SCN8A-201ENST00000354534 SYCP1Q15431 976 aa9.69□□□□□ -0.86
SCN8A-201ENST00000354534 PPM1EQ8WY54 764 aa9.69□□□□□ -0.86
SCN8A-201ENST00000354534 SPATA24Q86W54 205 aa9.69□□□□□ -0.86
SCN8A-201ENST00000354534 CWC22Q9HCG8 908 aaKnown RBP9.69□□□□□ -0.86
SCN8A-201ENST00000354534 CCDC146Q8IYE0 955 aa9.68□□□□□ -0.86
SCN8A-201ENST00000354534 CFAP57Q96MR6 1250 aa9.68□□□□□ -0.86
SCN8A-201ENST00000354534 CFDP1Q9UEE9 299 aaPredicted RBP9.68□□□□□ -0.86
SCN8A-201ENST00000354534 CFAP45Q9UL16 551 aa9.68□□□□□ -0.86
SCN8A-201ENST00000354534 SPAG9O60271 1321 aaKnown RBP9.68□□□□□ -0.86
SCN8A-201ENST00000354534 FHAD1B1AJZ9 1412 aa9.68□□□□□ -0.86
SCN8A-201ENST00000354534 CLGNO14967 610 aa9.67□□□□□ -0.86
SCN8A-201ENST00000354534 BRPF1P55201 1214 aaPredicted RBP9.67□□□□□ -0.86
SCN8A-201ENST00000354534 NASPP49321 788 aaPredicted RBP9.67□□□□□ -0.86
SCN8A-201ENST00000354534 MAP2K1Q02750 393 aaPredicted RBP9.67□□□□□ -0.86
SCN8A-201ENST00000354534 GTF2E1P29083 439 aaPredicted RBP9.67□□□□□ -0.86
SCN8A-201ENST00000354534 SMARCE1Q969G3 411 aa9.67□□□□□ -0.86
SCN8A-201ENST00000354534 RBM33Q96EV2 1170 aaKnown RBP9.67□□□□□ -0.86
SCN8A-201ENST00000354534 CPLX1O14810 134 aa9.67□□□□□ -0.86
SCN8A-201ENST00000354534 PUS7Q96PZ0 661 aaKnown RBP9.67□□□□□ -0.86
SCN8A-201ENST00000354534 CLUAP1Q96AJ1 413 aa9.66□□□□□ -0.86
SCN8A-201ENST00000354534 LRRCC1Q9C099 1032 aa9.66□□□□□ -0.86
SCN8A-201ENST00000354534 CCDC181Q5TID7 509 aa9.66□□□□□ -0.86
SCN8A-201ENST00000354534 MSH5O43196 834 aa9.66□□□□□ -0.86
SCN8A-201ENST00000354534 CCDC175P0C221 793 aa9.66□□□□□ -0.86
SCN8A-201ENST00000354534 RABEP1Q15276 862 aa9.66□□□□□ -0.86
SCN8A-201ENST00000354534 SLC26A8Q96RN1 970 aa9.66□□□□□ -0.86
SCN8A-201ENST00000354534 PHLDB1Q86UU1 1377 aa9.66□□□□□ -0.86
SCN8A-201ENST00000354534 SMC2O95347 1197 aa9.66□□□□□ -0.86
SCN8A-201ENST00000354534 ANKRD45Q5TZF3 282 aa9.66□□□□□ -0.86
SCN8A-201ENST00000354534 WWC2Q6AWC2 1192 aa9.66□□□□□ -0.86
SCN8A-201ENST00000354534 NOL10Q9BSC4 688 aaKnown RBP9.66□□□□□ -0.86
SCN8A-201ENST00000354534 TMEM132AQ24JP5 1023 aa9.66□□□□□ -0.86
SCN8A-201ENST00000354534 STAMBPO95630 424 aa9.66□□□□□ -0.86
SCN8A-201ENST00000354534 ANO2Q9NQ90 1003 aa9.66□□□□□ -0.86
SCN8A-201ENST00000354534 CGNL1Q0VF96 1302 aa9.65□□□□□ -0.86
SCN8A-201ENST00000354534 PRKCSHP14314 528 aaPredicted RBP9.65□□□□□ -0.86
SCN8A-201ENST00000354534 NFXL1Q6ZNB6 911 aa9.65□□□□□ -0.86
SCN8A-201ENST00000354534 CCDC112Q8NEF3 446 aa9.65□□□□□ -0.86
SCN8A-201ENST00000354534 CCDC91Q7Z6B0 441 aa9.65□□□□□ -0.86
SCN8A-201ENST00000354534 VPS37CA5D8V6 355 aaPredicted RBP9.65□□□□□ -0.86
SCN8A-201ENST00000354534 SPC24Q8NBT2 197 aa9.65□□□□□ -0.87
SCN8A-201ENST00000354534 KIF27Q86VH2 1401 aa9.64□□□□□ -0.87
SCN8A-201ENST00000354534 TRIM5Q9C035 493 aa9.64□□□□□ -0.87
SCN8A-201ENST00000354534 ERICH2A1L162 156 aa9.64□□□□□ -0.87
SCN8A-201ENST00000354534 CCP110O43303 1012 aa9.64□□□□□ -0.87
SCN8A-201ENST00000354534 CCDC73Q6ZRK6 1079 aa9.64□□□□□ -0.87
SCN8A-201ENST00000354534 U2AF1L5P0DN76 240 aaPredicted RBP9.63□□□□□ -0.87
SCN8A-201ENST00000354534 U2AF1Q01081 240 aaKnown RBP eCLIP9.63□□□□□ -0.87
SCN8A-201ENST00000354534 FAM177A1Q8N128 213 aaPredicted RBP9.63□□□□□ -0.87
SCN8A-201ENST00000354534 DDX11Q96FC9 970 aa9.63□□□□□ -0.87
SCN8A-201ENST00000354534 MAGEC2Q9UBF1 373 aaPredicted RBP9.63□□□□□ -0.87
SCN8A-201ENST00000354534 SOGA3Q5TF21 947 aa9.63□□□□□ -0.87
SCN8A-201ENST00000354534 HDGFP51858 240 aaKnown RBP9.63□□□□□ -0.87
SCN8A-201ENST00000354534 CHMP5Q9NZZ3 219 aa9.63□□□□□ -0.87
SCN8A-201ENST00000354534 CCNB3Q8WWL7 1395 aa9.63□□□□□ -0.87
SCN8A-201ENST00000354534 KDM4AO75164 1064 aa9.63□□□□□ -0.87
SCN8A-201ENST00000354534 FILIP1LQ4L180 1135 aa9.63□□□□□ -0.87
SCN8A-201ENST00000354534 TRHP20396 242 aaPredicted RBP9.63□□□□□ -0.87
SCN8A-201ENST00000354534 CCDC102AQ96A19 550 aa9.63□□□□□ -0.87
SCN8A-201ENST00000354534 LRRFIP2Q9Y608 721 aaKnown RBP9.63□□□□□ -0.87
SCN8A-201ENST00000354534 ZWINTO95229 277 aa9.63□□□□□ -0.87
SCN8A-201ENST00000354534 FAM161AQ3B820 660 aa9.62□□□□□ -0.87
SCN8A-201ENST00000354534 BMS1Q14692 1282 aaKnown RBP9.62□□□□□ -0.87
SCN8A-201ENST00000354534 LRRFIP1Q32MZ4 808 aaKnown RBP9.62□□□□□ -0.87
SCN8A-201ENST00000354534 RNF214Q8ND24 703 aa9.62□□□□□ -0.87
SCN8A-201ENST00000354534 TRDNQ13061 729 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 130.3 ms