RNA–Protein interactions for RNA: ENST00000354506.10

RPE-201, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 3,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-201ENST00000354506 NEFMP07197 916 aa12.74□□□□□ -0.37
RPE-201ENST00000354506 VWDEQ8N2E2 1590 aa12.74□□□□□ -0.37
RPE-201ENST00000354506 SYNMO15061 1565 aa12.74□□□□□ -0.37
RPE-201ENST00000354506 MYOM1P52179 1685 aa12.73□□□□□ -0.37
RPE-201ENST00000354506 CLASP1Q7Z460 1538 aa12.73□□□□□ -0.37
RPE-201ENST00000354506 TCERG1O14776 1098 aaKnown RBP12.73□□□□□ -0.37
RPE-201ENST00000354506 STAC3Q96MF2 364 aa12.73□□□□□ -0.37
RPE-201ENST00000354506 ZFYVE16Q7Z3T8 1539 aa12.72□□□□□ -0.37
RPE-201ENST00000354506 KIAA1210Q9ULL0 1709 aa12.72□□□□□ -0.37
RPE-201ENST00000354506 CLTCL1P53675 1640 aa12.72□□□□□ -0.37
RPE-201ENST00000354506 ZNF521Q96K83 1311 aa12.72□□□□□ -0.37
RPE-201ENST00000354506 AMER1Q5JTC6 1135 aaPredicted RBP12.71□□□□□ -0.37
RPE-201ENST00000354506 MS4A1P11836 297 aa12.71□□□□□ -0.38
RPE-201ENST00000354506 EFCAB2Q5VUJ9 269 aa12.71□□□□□ -0.38
RPE-201ENST00000354506 SENP3Q9H4L4 574 aaPredicted RBP12.71□□□□□ -0.38
RPE-201ENST00000354506 TET3O43151 1660 aa12.7□□□□□ -0.38
RPE-201ENST00000354506 NPC1L1Q9UHC9 1359 aa12.7□□□□□ -0.38
RPE-201ENST00000354506 SCAF11Q99590 1463 aaKnown RBP12.7□□□□□ -0.38
RPE-201ENST00000354506 PDE4AP27815 886 aa12.7□□□□□ -0.38
RPE-201ENST00000354506 C20orf194Q5TEA3 1177 aa12.7□□□□□ -0.38
RPE-201ENST00000354506 ADAMTS8Q9UP79 889 aa12.69□□□□□ -0.38
RPE-201ENST00000354506 BACH2Q9BYV9 841 aa12.69□□□□□ -0.38
RPE-201ENST00000354506 PPP2R1AP30153 589 aa12.68□□□□□ -0.38
RPE-201ENST00000354506 INO80Q9ULG1 1556 aaPredicted RBP12.68□□□□□ -0.38
RPE-201ENST00000354506 PIK3C2GO75747 1445 aa12.68□□□□□ -0.38
RPE-201ENST00000354506 CRBNQ96SW2 442 aa12.67□□□□□ -0.38
RPE-201ENST00000354506 PLEKHH1Q9ULM0 1364 aa12.67□□□□□ -0.38
RPE-201ENST00000354506 ASXL1Q8IXJ9 1541 aa12.67□□□□□ -0.38
RPE-201ENST00000354506 ABCA9Q8IUA7 1624 aa12.67□□□□□ -0.38
RPE-201ENST00000354506 MROH1Q8NDA8 1641 aa12.66□□□□□ -0.38
RPE-201ENST00000354506 RGS3P49796 1198 aa12.66□□□□□ -0.38
RPE-201ENST00000354506 DUSP27Q5VZP5 1158 aa12.66□□□□□ -0.38
RPE-201ENST00000354506 TRMT2AQ8IZ69 625 aaKnown RBP12.66□□□□□ -0.38
RPE-201ENST00000354506 KDM2BQ8NHM5 1336 aa12.66□□□□□ -0.38
RPE-201ENST00000354506 IFT172Q9UG01 1749 aa12.65□□□□□ -0.38
RPE-201ENST00000354506 ARXQ96QS3 562 aa12.65□□□□□ -0.39
RPE-201ENST00000354506 AFAP1Q8N556 730 aa12.64□□□□□ -0.39
RPE-201ENST00000354506 SPAG9O60271 1321 aaKnown RBP12.64□□□□□ -0.39
RPE-201ENST00000354506 MYOM2P54296 1465 aa12.64□□□□□ -0.39
RPE-201ENST00000354506 MAP3K4Q9Y6R4 1608 aa12.63□□□□□ -0.39
RPE-201ENST00000354506 KDM5AP29375 1690 aaKnown RBP12.63□□□□□ -0.39
RPE-201ENST00000354506 CDCA8Q53HL2 280 aa12.63□□□□□ -0.39
RPE-201ENST00000354506 KNSTRNQ9Y448 316 aa12.63□□□□□ -0.39
RPE-201ENST00000354506 NRXN1Q9ULB1 1477 aa12.63□□□□□ -0.39
RPE-201ENST00000354506 MYO3AQ8NEV4 1616 aa12.63□□□□□ -0.39
RPE-201ENST00000354506 ATP7AQ04656 1500 aa12.62□□□□□ -0.39
RPE-201ENST00000354506 CCDC146Q8IYE0 955 aa12.62□□□□□ -0.39
RPE-201ENST00000354506 BRPF3Q9ULD4 1205 aa12.62□□□□□ -0.39
RPE-201ENST00000354506 ABCA6Q8N139 1617 aa12.61□□□□□ -0.39
RPE-201ENST00000354506 ERVK-7P63135 1459 aa12.61□□□□□ -0.39
RPE-201ENST00000354506 SLFN5Q08AF3 891 aa12.6□□□□□ -0.39
RPE-201ENST00000354506 LMTK2Q8IWU2 1503 aa12.59□□□□□ -0.39
RPE-201ENST00000354506 EIF3AQ14152 1382 aaKnown RBP12.59□□□□□ -0.39
RPE-201ENST00000354506 GOLGA2Q08379 1002 aa12.58□□□□□ -0.4
RPE-201ENST00000354506 KIF1BO60333 1816 aa12.58□□□□□ -0.4
RPE-201ENST00000354506 FANCAO15360 1455 aa12.58□□□□□ -0.4
RPE-201ENST00000354506 MROH2AA6NES4 1674 aa12.58□□□□□ -0.4
RPE-201ENST00000354506 EFCAB6Q5THR3 1501 aa12.57□□□□□ -0.4
RPE-201ENST00000354506 DAXXQ9UER7 740 aaPredicted RBP12.57□□□□□ -0.4
RPE-201ENST00000354506 CARD14Q9BXL6 1004 aa12.57□□□□□ -0.4
RPE-201ENST00000354506 UGGT1Q9NYU2 1555 aa12.57□□□□□ -0.4
RPE-201ENST00000354506 SBNO2Q9Y2G9 1366 aa12.57□□□□□ -0.4
RPE-201ENST00000354506 SLC24A1O60721 1099 aa12.57□□□□□ -0.4
RPE-201ENST00000354506 WDR43Q15061 677 aaKnown RBP eCLIP12.57□□□□□ -0.4
RPE-201ENST00000354506 SETBP1Q9Y6X0 1596 aa12.56□□□□□ -0.4
RPE-201ENST00000354506 SPINK5Q9NQ38 1064 aaPredicted RBP12.56□□□□□ -0.4
RPE-201ENST00000354506 KIDINS220Q9ULH0 1771 aa12.56□□□□□ -0.4
RPE-201ENST00000354506 CENPQQ7L2Z9 268 aaPredicted RBP12.56□□□□□ -0.4
RPE-201ENST00000354506 PPRC1Q5VV67 1664 aaKnown RBP12.55□□□□□ -0.4
RPE-201ENST00000354506 NEUROD2Q15784 382 aa12.55□□□□□ -0.4
RPE-201ENST00000354506 KANK1Q14678 1352 aa12.55□□□□□ -0.4
RPE-201ENST00000354506 ADGRF5Q8IZF2 1346 aa12.55□□□□□ -0.4
RPE-201ENST00000354506 EIF5BO60841 1220 aaKnown RBP12.55□□□□□ -0.4
RPE-201ENST00000354506 ZC3H13Q5T200 1668 aaKnown RBP12.55□□□□□ -0.4
RPE-201ENST00000354506 NKTRP30414 1462 aaKnown RBP12.54□□□□□ -0.4
RPE-201ENST00000354506 TNNT2P45379 298 aaPredicted RBP12.54□□□□□ -0.4
RPE-201ENST00000354506 CFAP70Q5T0N1 1121 aa12.54□□□□□ -0.4
RPE-201ENST00000354506 ADGRB3O60242 1522 aa12.54□□□□□ -0.4
RPE-201ENST00000354506 SHPRHQ149N8 1683 aa12.54□□□□□ -0.4
RPE-201ENST00000354506 NGEFQ8N5V2 710 aa12.53□□□□□ -0.4
RPE-201ENST00000354506 USP35Q9P2H5 1018 aa12.53□□□□□ -0.4
RPE-201ENST00000354506 ADGRL1O94910 1474 aa12.52□□□□□ -0.4
RPE-201ENST00000354506 POLR3AO14802 1390 aaPredicted RBP12.52□□□□□ -0.4
RPE-201ENST00000354506 KIF3BO15066 747 aa12.52□□□□□ -0.41
RPE-201ENST00000354506 C8orf34Q49A92 452 aa12.52□□□□□ -0.41
RPE-201ENST00000354506 PPLO60437 1756 aa12.51□□□□□ -0.41
RPE-201ENST00000354506 ADGRB1O14514 1584 aa12.51□□□□□ -0.41
RPE-201ENST00000354506 SPRYD3Q8NCJ5 442 aa12.51□□□□□ -0.41
RPE-201ENST00000354506 USP32Q8NFA0 1604 aa12.5□□□□□ -0.41
RPE-201ENST00000354506 APAF1O14727 1248 aa12.5□□□□□ -0.41
RPE-201ENST00000354506 PRKCSHP14314 528 aaPredicted RBP12.5□□□□□ -0.41
RPE-201ENST00000354506 NFKBIBQ15653 356 aa12.5□□□□□ -0.41
RPE-201ENST00000354506 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.5□□□□□ -0.41
RPE-201ENST00000354506 DMRT2Q9Y5R5 561 aa12.5□□□□□ -0.41
RPE-201ENST00000354506 E9PSI1 815 aa12.49□□□□□ -0.41
RPE-201ENST00000354506 FRAT2O75474 233 aaPredicted RBP12.49□□□□□ -0.41
RPE-201ENST00000354506 BCAR3O75815 825 aa12.49□□□□□ -0.41
RPE-201ENST00000354506 FRAT1Q92837 279 aaPredicted RBP12.49□□□□□ -0.41
RPE-201ENST00000354506 DDRGK1Q96HY6 314 aa12.48□□□□□ -0.41
RPE-201ENST00000354506 PHF23Q9BUL5 403 aaPredicted RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms