RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 KIAA1107Q9UPP5 1409 aa15.26■□□□□ 0.03
TRPM3-201ENST00000354500 GOLGA6L3A6NEY3 463 aa15.26■□□□□ 0.03
TRPM3-201ENST00000354500 KIAA1211Q6ZU35 1233 aa15.26■□□□□ 0.03
TRPM3-201ENST00000354500 BICRAQ9NZM4 1560 aa15.26■□□□□ 0.03
TRPM3-201ENST00000354500 COG3Q96JB2 828 aa15.26■□□□□ 0.03
TRPM3-201ENST00000354500 CCDC9Q9Y3X0 531 aaKnown RBP15.26■□□□□ 0.03
TRPM3-201ENST00000354500 MSH5O43196 834 aa15.26■□□□□ 0.03
TRPM3-201ENST00000354500 C9orf84Q5VXU9 1444 aa15.24■□□□□ 0.03
TRPM3-201ENST00000354500 RILPL2Q969X0 211 aa15.24■□□□□ 0.03
TRPM3-201ENST00000354500 DAPK1P53355 1430 aa15.23■□□□□ 0.03
TRPM3-201ENST00000354500 MSNP26038 577 aaKnown RBP15.23■□□□□ 0.03
TRPM3-201ENST00000354500 NFKBIBQ15653 356 aa15.23■□□□□ 0.03
TRPM3-201ENST00000354500 C20orf194Q5TEA3 1177 aa15.23■□□□□ 0.03
TRPM3-201ENST00000354500 NUTM2GQ5VZR2 741 aa15.23■□□□□ 0.03
TRPM3-201ENST00000354500 CHMP3Q9Y3E7 222 aa15.23■□□□□ 0.03
TRPM3-201ENST00000354500 EIF2S2P20042 333 aaKnown RBP15.22■□□□□ 0.03
TRPM3-201ENST00000354500 MIA2Q96PC5 1412 aa15.22■□□□□ 0.03
TRPM3-201ENST00000354500 RAPGEF3O95398 923 aa15.22■□□□□ 0.03
TRPM3-201ENST00000354500 TROQ12816 1431 aaPredicted RBP15.22■□□□□ 0.03
TRPM3-201ENST00000354500 PCF11O94913 1555 aaKnown RBP15.21■□□□□ 0.03
TRPM3-201ENST00000354500 ANKRD30BQ9BXX2 1392 aa15.21■□□□□ 0.03
TRPM3-201ENST00000354500 HMMRO75330 724 aa15.21■□□□□ 0.03
TRPM3-201ENST00000354500 EXOSC9Q06265 439 aaKnown RBP15.21■□□□□ 0.03
TRPM3-201ENST00000354500 C1orf115Q9H7X2 142 aa15.2■□□□□ 0.02
TRPM3-201ENST00000354500 DDX19BQ9UMR2 479 aa15.2■□□□□ 0.02
TRPM3-201ENST00000354500 NGEFQ8N5V2 710 aa15.2■□□□□ 0.02
TRPM3-201ENST00000354500 USP35Q9P2H5 1018 aa15.2■□□□□ 0.02
TRPM3-201ENST00000354500 EPRSP07814 1512 aaKnown RBP15.2■□□□□ 0.02
TRPM3-201ENST00000354500 TULP1O00294 542 aaPredicted RBP15.19■□□□□ 0.02
TRPM3-201ENST00000354500 LMOD3Q0VAK6 560 aa15.19■□□□□ 0.02
TRPM3-201ENST00000354500 ARHGAP5Q13017 1502 aa15.19■□□□□ 0.02
TRPM3-201ENST00000354500 PTPRKQ15262 1439 aa15.19■□□□□ 0.02
TRPM3-201ENST00000354500 SCAPERQ9BY12 1400 aa15.19■□□□□ 0.02
TRPM3-201ENST00000354500 FRAT2O75474 233 aaPredicted RBP15.19■□□□□ 0.02
TRPM3-201ENST00000354500 ZNF428Q96B54 188 aa15.17■□□□□ 0.02
TRPM3-201ENST00000354500 BACH2Q9BYV9 841 aa15.17■□□□□ 0.02
TRPM3-201ENST00000354500 DDX49Q9Y6V7 483 aaKnown RBP15.17■□□□□ 0.02
TRPM3-201ENST00000354500 EFCAB5A4FU69 1503 aa15.17■□□□□ 0.02
TRPM3-201ENST00000354500 AMER1Q5JTC6 1135 aaPredicted RBP15.17■□□□□ 0.02
TRPM3-201ENST00000354500 EHBP1L1Q8N3D4 1523 aa15.17■□□□□ 0.02
TRPM3-201ENST00000354500 PLB1Q6P1J6 1458 aa15.17■□□□□ 0.02
TRPM3-201ENST00000354500 SNAPC4Q5SXM2 1469 aa15.16■□□□□ 0.02
TRPM3-201ENST00000354500 PRAM1Q96QH2 718 aa15.16■□□□□ 0.02
TRPM3-201ENST00000354500 PDZRN3Q9UPQ7 1066 aa15.16■□□□□ 0.02
TRPM3-201ENST00000354500 DRC7Q8IY82 874 aa15.16■□□□□ 0.02
TRPM3-201ENST00000354500 HMGXB3Q12766 1538 aa15.16■□□□□ 0.02
TRPM3-201ENST00000354500 PRKAR2BP31323 418 aa15.16■□□□□ 0.02
TRPM3-201ENST00000354500 ABCC5O15440 1437 aa15.15■□□□□ 0.02
TRPM3-201ENST00000354500 C22orf23Q9BZE7 217 aa15.15■□□□□ 0.02
TRPM3-201ENST00000354500 FKBP5Q13451 457 aaPredicted RBP15.14■□□□□ 0.01
TRPM3-201ENST00000354500 IL27Q8NEV9 243 aa15.13■□□□□ 0.01
TRPM3-201ENST00000354500 ARHGEF11O15085 1522 aa15.13■□□□□ 0.01
TRPM3-201ENST00000354500 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.13■□□□□ 0.01
TRPM3-201ENST00000354500 SYNJ2O15056 1496 aa15.13■□□□□ 0.01
TRPM3-201ENST00000354500 MRC2Q9UBG0 1479 aa15.13■□□□□ 0.01
TRPM3-201ENST00000354500 CABP1Q9NZU7 370 aa15.13■□□□□ 0.01
TRPM3-201ENST00000354500 BRPF3Q9ULD4 1205 aa15.13■□□□□ 0.01
TRPM3-201ENST00000354500 ST18O60284 1047 aa15.12■□□□□ 0.01
TRPM3-201ENST00000354500 TXNDC2Q86VQ3 553 aa15.12■□□□□ 0.01
TRPM3-201ENST00000354500 ABCA10Q8WWZ4 1543 aa15.12■□□□□ 0.01
TRPM3-201ENST00000354500 SMG6Q86US8 1419 aaKnown RBP15.11■□□□□ 0.01
TRPM3-201ENST00000354500 THUMPD2Q9BTF0 503 aaKnown RBP15.11■□□□□ 0.01
TRPM3-201ENST00000354500 CFAP44Q96MT7 982 aa15.1■□□□□ 0.01
TRPM3-201ENST00000354500 TEFQ10587 303 aa15.1■□□□□ 0.01
TRPM3-201ENST00000354500 ANO2Q9NQ90 1003 aa15.09■□□□□ 0.01
TRPM3-201ENST00000354500 NOB1Q9ULX3 412 aaKnown RBP15.09■□□□□ 0.01
TRPM3-201ENST00000354500 ERBINQ96RT1 1412 aa15.09■□□□□ 0.01
TRPM3-201ENST00000354500 GORABQ5T7V8 394 aa15.09■□□□□ 0.01
TRPM3-201ENST00000354500 TSPYL4Q9UJ04 414 aa15.09■□□□□ 0.01
TRPM3-201ENST00000354500 DNMBPQ6XZF7 1577 aa15.08■□□□□ 0
TRPM3-201ENST00000354500 MAPKBP1O60336 1514 aa15.08■□□□□ 0
TRPM3-201ENST00000354500 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.08■□□□□ 0
TRPM3-201ENST00000354500 PSME1Q06323 249 aa15.08■□□□□ 0
TRPM3-201ENST00000354500 API5Q9BZZ5 524 aaKnown RBP15.08■□□□□ 0
TRPM3-201ENST00000354500 GNAI1P63096 354 aa15.07■□□□□ 0
TRPM3-201ENST00000354500 CHMP5Q9NZZ3 219 aa15.07■□□□□ 0
TRPM3-201ENST00000354500 KIF16BQ96L93 1317 aa15.07■□□□□ 0
TRPM3-201ENST00000354500 NCOA1Q15788 1441 aa15.07■□□□□ 0
TRPM3-201ENST00000354500 WWC1Q8IX03 1113 aa15.07■□□□□ 0
TRPM3-201ENST00000354500 HSP90B1P14625 803 aaKnown RBP15.06■□□□□ 0
TRPM3-201ENST00000354500 STAC3Q96MF2 364 aa15.06■□□□□ 0
TRPM3-201ENST00000354500 IFT140Q96RY7 1462 aa15.06■□□□□ 0
TRPM3-201ENST00000354500 NLRP6P59044 892 aa15.06■□□□□ 0
TRPM3-201ENST00000354500 SUPT6HQ7KZ85 1726 aaKnown RBP15.06■□□□□ 0
TRPM3-201ENST00000354500 RRS1Q15050 365 aaKnown RBP15.06■□□□□ 0
TRPM3-201ENST00000354500 DDX11L8A8MPP1 907 aa15.05■□□□□ 0
TRPM3-201ENST00000354500 SLFN5Q08AF3 891 aa15.05■□□□□ 0
TRPM3-201ENST00000354500 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.05■□□□□ 0
TRPM3-201ENST00000354500 PDE3AQ14432 1141 aa15.05■□□□□ -0
TRPM3-201ENST00000354500 SLC26A8Q96RN1 970 aa15.05■□□□□ -0
TRPM3-201ENST00000354500 C9orf78Q9NZ63 289 aaPredicted RBP15.05■□□□□ -0
TRPM3-201ENST00000354500 CDK19Q9BWU1 502 aa15.04■□□□□ -0
TRPM3-201ENST00000354500 KIAA0586Q9BVV6 1533 aa15.04■□□□□ -0
TRPM3-201ENST00000354500 ADGRF5Q8IZF2 1346 aa15.04■□□□□ -0
TRPM3-201ENST00000354500 ROCK1Q13464 1354 aa15.04■□□□□ -0
TRPM3-201ENST00000354500 FBLN1P23142 703 aa15.04■□□□□ -0
TRPM3-201ENST00000354500 GNL2Q13823 731 aaKnown RBP15.04■□□□□ -0
TRPM3-201ENST00000354500 SULT6B1Q6IMI4 303 aa15.04■□□□□ -0
TRPM3-201ENST00000354500 ZNF608Q9ULD9 1512 aaPredicted RBP15.04■□□□□ -0
TRPM3-201ENST00000354500 TAF7LQ5H9L4 462 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms