RNA–Protein interactions for RNA: ENST00000354452.7

TCF4-201, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 3,482 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-201ENST00000354452 MSNP26038 577 aaKnown RBP22.3■■□□□ 1.16
TCF4-201ENST00000354452 ERBINQ96RT1 1412 aa22.29■■□□□ 1.16
TCF4-201ENST00000354452 CHMP7Q8WUX9 453 aaPredicted RBP22.29■■□□□ 1.16
TCF4-201ENST00000354452 CAMSAP2Q08AD1 1489 aa22.28■■□□□ 1.16
TCF4-201ENST00000354452 FAM13BQ9NYF5 915 aa22.27■■□□□ 1.16
TCF4-201ENST00000354452 ANTXR1Q9H6X2 564 aa22.27■■□□□ 1.16
TCF4-201ENST00000354452 BLMP54132 1417 aaPredicted RBP22.27■■□□□ 1.16
TCF4-201ENST00000354452 ITPRIPQ8IWB1 547 aa22.27■■□□□ 1.16
TCF4-201ENST00000354452 GBP4Q96PP9 640 aa22.26■■□□□ 1.15
TCF4-201ENST00000354452 MBD5Q9P267 1494 aa22.26■■□□□ 1.15
TCF4-201ENST00000354452 KIF14Q15058 1648 aa22.26■■□□□ 1.15
TCF4-201ENST00000354452 SAMD9Q5K651 1589 aa22.26■■□□□ 1.15
TCF4-201ENST00000354452 EIF3AQ14152 1382 aaKnown RBP22.25■■□□□ 1.15
TCF4-201ENST00000354452 GOLGA6L22H0YM25 854 aa22.25■■□□□ 1.15
TCF4-201ENST00000354452 KIAA1211Q6ZU35 1233 aa22.25■■□□□ 1.15
TCF4-201ENST00000354452 SENP3Q9H4L4 574 aaPredicted RBP22.25■■□□□ 1.15
TCF4-201ENST00000354452 UHRF1BP1Q6BDS2 1440 aa22.25■■□□□ 1.15
TCF4-201ENST00000354452 KIAA0586Q9BVV6 1533 aa22.25■■□□□ 1.15
TCF4-201ENST00000354452 NKTRP30414 1462 aaKnown RBP22.24■■□□□ 1.15
TCF4-201ENST00000354452 PLEKHH2Q8IVE3 1493 aa22.24■■□□□ 1.15
TCF4-201ENST00000354452 RLBP1P12271 317 aa22.23■■□□□ 1.15
TCF4-201ENST00000354452 ZMYM4Q5VZL5 1548 aa22.23■■□□□ 1.15
TCF4-201ENST00000354452 MORC1Q86VD1 984 aa22.22■■□□□ 1.15
TCF4-201ENST00000354452 WWC1Q8IX03 1113 aa22.22■■□□□ 1.15
TCF4-201ENST00000354452 AMER1Q5JTC6 1135 aaPredicted RBP22.21■■□□□ 1.15
TCF4-201ENST00000354452 C9orf84Q5VXU9 1444 aa22.21■■□□□ 1.15
TCF4-201ENST00000354452 CHGAP10645 457 aaKnown RBP22.21■■□□□ 1.15
TCF4-201ENST00000354452 DDX49Q9Y6V7 483 aaKnown RBP22.2■■□□□ 1.14
TCF4-201ENST00000354452 SMC4Q9NTJ3 1288 aa22.2■■□□□ 1.14
TCF4-201ENST00000354452 DNMT1P26358 1616 aaKnown RBP22.18■■□□□ 1.14
TCF4-201ENST00000354452 FSD2A1L4K1 749 aa22.18■■□□□ 1.14
TCF4-201ENST00000354452 TCP11L2Q8N4U5 519 aa22.18■■□□□ 1.14
TCF4-201ENST00000354452 POLR1AO95602 1720 aaPredicted RBP22.18■■□□□ 1.14
TCF4-201ENST00000354452 RARSP54136 660 aaKnown RBP22.18■■□□□ 1.14
TCF4-201ENST00000354452 LNPKQ9C0E8 428 aa22.18■■□□□ 1.14
TCF4-201ENST00000354452 R3HCC1Q9Y3T6 440 aaKnown RBP22.18■■□□□ 1.14
TCF4-201ENST00000354452 TROQ12816 1431 aaPredicted RBP22.17■■□□□ 1.14
TCF4-201ENST00000354452 ERBB4Q15303 1308 aa22.17■■□□□ 1.14
TCF4-201ENST00000354452 ZNF521Q96K83 1311 aa22.16■■□□□ 1.14
TCF4-201ENST00000354452 U2AF1L5P0DN76 240 aaPredicted RBP22.16■■□□□ 1.14
TCF4-201ENST00000354452 NASPP49321 788 aaPredicted RBP22.16■■□□□ 1.14
TCF4-201ENST00000354452 U2AF1Q01081 240 aaKnown RBP eCLIP22.16■■□□□ 1.14
TCF4-201ENST00000354452 TPRNQ4KMQ1 711 aa22.16■■□□□ 1.14
TCF4-201ENST00000354452 TNPO1Q92973 898 aaKnown RBP22.16■■□□□ 1.14
TCF4-201ENST00000354452 URB2Q14146 1524 aaKnown RBP22.15■■□□□ 1.14
TCF4-201ENST00000354452 PRAG1Q86YV5 1406 aa22.15■■□□□ 1.14
TCF4-201ENST00000354452 U2SURPO15042 1029 aaKnown RBP22.15■■□□□ 1.14
TCF4-201ENST00000354452 DZIP1LQ8IYY4 767 aaKnown RBP22.14■■□□□ 1.13
TCF4-201ENST00000354452 ZKSCAN2Q63HK3 967 aa22.14■■□□□ 1.13
TCF4-201ENST00000354452 IQGAP2Q13576 1575 aa22.13■■□□□ 1.13
TCF4-201ENST00000354452 GPATCH8Q9UKJ3 1502 aaKnown RBP22.13■■□□□ 1.13
TCF4-201ENST00000354452 GAS2L3Q86XJ1 694 aa22.13■■□□□ 1.13
TCF4-201ENST00000354452 TSR2Q969E8 191 aaKnown RBP22.12■■□□□ 1.13
TCF4-201ENST00000354452 TPM2P07951 284 aa22.11■■□□□ 1.13
TCF4-201ENST00000354452 DNTTIP2Q5QJE6 756 aaKnown RBP22.11■■□□□ 1.13
TCF4-201ENST00000354452 NUP153P49790 1475 aaKnown RBP22.1■■□□□ 1.13
TCF4-201ENST00000354452 CFAP53Q96M91 514 aa22.09■■□□□ 1.13
TCF4-201ENST00000354452 FOXD4L5Q5VV16 416 aaPredicted RBP22.08■■□□□ 1.13
TCF4-201ENST00000354452 FOXD4L4Q8WXT5 416 aaPredicted RBP22.08■■□□□ 1.13
TCF4-201ENST00000354452 WDR62O43379 1518 aa22.08■■□□□ 1.13
TCF4-201ENST00000354452 PTMAP06454 111 aaKnown RBP22.08■■□□□ 1.13
TCF4-201ENST00000354452 LAMC3Q9Y6N6 1575 aa22.08■■□□□ 1.12
TCF4-201ENST00000354452 PLB1Q6P1J6 1458 aa22.08■■□□□ 1.12
TCF4-201ENST00000354452 COL17A1Q9UMD9 1497 aaPredicted RBP22.08■■□□□ 1.12
TCF4-201ENST00000354452 SKOR2Q2VWA4 1001 aaPredicted RBP22.08■■□□□ 1.12
TCF4-201ENST00000354452 PDCL3Q9H2J4 239 aa22.08■■□□□ 1.12
TCF4-201ENST00000354452 A0A0U1RQG5 324 aaPredicted RBP22.07■■□□□ 1.12
TCF4-201ENST00000354452 CALD1Q05682 793 aaKnown RBP22.07■■□□□ 1.12
TCF4-201ENST00000354452 MVPQ14764 893 aaKnown RBP22.07■■□□□ 1.12
TCF4-201ENST00000354452 TRMT2AQ8IZ69 625 aaKnown RBP22.07■■□□□ 1.12
TCF4-201ENST00000354452 RUNDC1Q96C34 613 aa22.07■■□□□ 1.12
TCF4-201ENST00000354452 ANKRD45Q5TZF3 282 aa22.06■■□□□ 1.12
TCF4-201ENST00000354452 ARHGEF12Q9NZN5 1544 aa22.05■■□□□ 1.12
TCF4-201ENST00000354452 MCTP1Q6DN14 999 aa22.05■■□□□ 1.12
TCF4-201ENST00000354452 JPH4Q96JJ6 628 aa22.05■■□□□ 1.12
TCF4-201ENST00000354452 CAVIN1Q6NZI2 390 aaKnown RBP22.04■■□□□ 1.12
TCF4-201ENST00000354452 SSFA2P28290 1259 aa22.03■■□□□ 1.12
TCF4-201ENST00000354452 ZSCAN30Q86W11 494 aa22.03■■□□□ 1.12
TCF4-201ENST00000354452 XPCQ01831 940 aaPredicted RBP22.03■■□□□ 1.12
TCF4-201ENST00000354452 CCDC173Q0VFZ6 552 aa22.02■■□□□ 1.12
TCF4-201ENST00000354452 RBM42Q9BTD8 480 aaKnown RBP22.02■■□□□ 1.12
TCF4-201ENST00000354452 PODXL2Q9NZ53 605 aa22.02■■□□□ 1.12
TCF4-201ENST00000354452 MTHFSP49914 203 aa22.02■■□□□ 1.12
TCF4-201ENST00000354452 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.01■■□□□ 1.11
TCF4-201ENST00000354452 MAGI2Q86UL8 1455 aa22.01■■□□□ 1.11
TCF4-201ENST00000354452 CFAP70Q5T0N1 1121 aa22.01■■□□□ 1.11
TCF4-201ENST00000354452 EXOSC9Q06265 439 aaKnown RBP22.01■■□□□ 1.11
TCF4-201ENST00000354452 MPNDQ8N594 471 aa22.01■■□□□ 1.11
TCF4-201ENST00000354452 ISY1Q9ULR0 285 aaKnown RBP22■■□□□ 1.11
TCF4-201ENST00000354452 APBB1O00213 710 aa22■■□□□ 1.11
TCF4-201ENST00000354452 PRDM10Q9NQV6 1147 aa21.99■■□□□ 1.11
TCF4-201ENST00000354452 DDX19BQ9UMR2 479 aa21.99■■□□□ 1.11
TCF4-201ENST00000354452 INSRP06213 1382 aa21.99■■□□□ 1.11
TCF4-201ENST00000354452 NGEFQ8N5V2 710 aa21.98■■□□□ 1.11
TCF4-201ENST00000354452 TRAK1Q9UPV9 953 aa21.98■■□□□ 1.11
TCF4-201ENST00000354452 SAFB2Q14151 953 aaKnown RBP eCLIP21.98■■□□□ 1.11
TCF4-201ENST00000354452 RNF214Q8ND24 703 aa21.98■■□□□ 1.11
TCF4-201ENST00000354452 C1orf115Q9H7X2 142 aa21.97■■□□□ 1.11
TCF4-201ENST00000354452 SLC12A5Q9H2X9 1139 aa21.97■■□□□ 1.11
TCF4-201ENST00000354452 NINLQ9Y2I6 1382 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms