RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 GPRASP1Q5JY77 1395 aa15.57■□□□□ 0.08
TRERF1-202ENST00000354325 PPP2R1AP30153 589 aa15.57■□□□□ 0.08
TRERF1-202ENST00000354325 STAC3Q96MF2 364 aa15.56■□□□□ 0.08
TRERF1-202ENST00000354325 NUP160Q12769 1436 aa15.56■□□□□ 0.08
TRERF1-202ENST00000354325 PRAG1Q86YV5 1406 aa15.56■□□□□ 0.08
TRERF1-202ENST00000354325 TRAK2O60296 914 aa15.55■□□□□ 0.08
TRERF1-202ENST00000354325 URB2Q14146 1524 aaKnown RBP15.55■□□□□ 0.08
TRERF1-202ENST00000354325 EIF2AK4Q9P2K8 1649 aaKnown RBP15.55■□□□□ 0.08
TRERF1-202ENST00000354325 MAP7D2Q96T17 732 aa15.54■□□□□ 0.08
TRERF1-202ENST00000354325 KDM5DQ9BY66 1539 aa15.54■□□□□ 0.08
TRERF1-202ENST00000354325 KIAA0586Q9BVV6 1533 aa15.54■□□□□ 0.08
TRERF1-202ENST00000354325 ESPNB1AK53 854 aa15.54■□□□□ 0.08
TRERF1-202ENST00000354325 XRCC6P12956 609 aaKnown RBP eCLIP15.53■□□□□ 0.08
TRERF1-202ENST00000354325 TBC1D32Q96NH3 1257 aa15.53■□□□□ 0.08
TRERF1-202ENST00000354325 GPATCH8Q9UKJ3 1502 aaKnown RBP15.53■□□□□ 0.08
TRERF1-202ENST00000354325 GZF1Q9H116 711 aaPredicted RBP15.52■□□□□ 0.08
TRERF1-202ENST00000354325 RAPGEF6Q8TEU7 1601 aa15.52■□□□□ 0.08
TRERF1-202ENST00000354325 FSD2A1L4K1 749 aa15.52■□□□□ 0.07
TRERF1-202ENST00000354325 GRPEL1Q9HAV7 217 aa15.52■□□□□ 0.07
TRERF1-202ENST00000354325 CLASP1Q7Z460 1538 aa15.52■□□□□ 0.07
TRERF1-202ENST00000354325 PIK3C2GO75747 1445 aa15.51■□□□□ 0.07
TRERF1-202ENST00000354325 ZMYND15Q9H091 742 aa15.51■□□□□ 0.07
TRERF1-202ENST00000354325 NUP153P49790 1475 aaKnown RBP15.51■□□□□ 0.07
TRERF1-202ENST00000354325 CIZ1Q9ULV3 898 aaPredicted RBP15.51■□□□□ 0.07
TRERF1-202ENST00000354325 CARMIL2Q6F5E8 1435 aa15.51■□□□□ 0.07
TRERF1-202ENST00000354325 CEP170Q5SW79 1584 aa15.5■□□□□ 0.07
TRERF1-202ENST00000354325 MSNP26038 577 aaKnown RBP15.5■□□□□ 0.07
TRERF1-202ENST00000354325 ZNF521Q96K83 1311 aa15.5■□□□□ 0.07
TRERF1-202ENST00000354325 JPH4Q96JJ6 628 aa15.5■□□□□ 0.07
TRERF1-202ENST00000354325 SCAPERQ9BY12 1400 aa15.5■□□□□ 0.07
TRERF1-202ENST00000354325 TBC1D2Q9BYX2 928 aa15.49■□□□□ 0.07
TRERF1-202ENST00000354325 PDCL3Q9H2J4 239 aa15.49■□□□□ 0.07
TRERF1-202ENST00000354325 PLEKHH1Q9ULM0 1364 aa15.49■□□□□ 0.07
TRERF1-202ENST00000354325 PRG4Q92954 1404 aaPredicted RBP15.49■□□□□ 0.07
TRERF1-202ENST00000354325 NPC1L1Q9UHC9 1359 aa15.49■□□□□ 0.07
TRERF1-202ENST00000354325 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.49■□□□□ 0.07
TRERF1-202ENST00000354325 LAMC1P11047 1609 aa15.48■□□□□ 0.07
TRERF1-202ENST00000354325 APAF1O14727 1248 aa15.48■□□□□ 0.07
TRERF1-202ENST00000354325 C22orf23Q9BZE7 217 aa15.48■□□□□ 0.07
TRERF1-202ENST00000354325 PLPPR3Q6T4P5 718 aa15.48■□□□□ 0.07
TRERF1-202ENST00000354325 MTERF4Q7Z6M4 381 aaKnown RBP15.48■□□□□ 0.07
TRERF1-202ENST00000354325 ANTXR1Q9H6X2 564 aa15.47■□□□□ 0.07
TRERF1-202ENST00000354325 COG6Q9Y2V7 657 aa15.47■□□□□ 0.07
TRERF1-202ENST00000354325 TRMT2AQ8IZ69 625 aaKnown RBP15.47■□□□□ 0.07
TRERF1-202ENST00000354325 HSP90AB1P08238 724 aaKnown RBP15.47■□□□□ 0.07
TRERF1-202ENST00000354325 TESK2Q96S53 571 aa15.47■□□□□ 0.07
TRERF1-202ENST00000354325 DISP3Q9P2K9 1392 aa15.47■□□□□ 0.07
TRERF1-202ENST00000354325 CCDC173Q0VFZ6 552 aa15.46■□□□□ 0.07
TRERF1-202ENST00000354325 CFAP44Q96MT7 982 aa15.46■□□□□ 0.07
TRERF1-202ENST00000354325 PTPRGP23470 1445 aa15.46■□□□□ 0.07
TRERF1-202ENST00000354325 NBPF1Q3BBV0 1214 aa15.46■□□□□ 0.07
TRERF1-202ENST00000354325 FTSJ3Q8IY81 847 aaKnown RBP15.46■□□□□ 0.07
TRERF1-202ENST00000354325 EIF4G3O43432 1585 aaKnown RBP15.46■□□□□ 0.06
TRERF1-202ENST00000354325 KIAA0556O60303 1618 aa15.45■□□□□ 0.06
TRERF1-202ENST00000354325 ADAMTS12P58397 1594 aa15.45■□□□□ 0.06
TRERF1-202ENST00000354325 CROCC2H7BZ55 1655 aa15.45■□□□□ 0.06
TRERF1-202ENST00000354325 ZNF608Q9ULD9 1512 aaPredicted RBP15.45■□□□□ 0.06
TRERF1-202ENST00000354325 BCAR3O75815 825 aa15.45■□□□□ 0.06
TRERF1-202ENST00000354325 IGHDP01880 384 aa15.45■□□□□ 0.06
TRERF1-202ENST00000354325 CHMP4BQ9H444 224 aaKnown RBP15.44■□□□□ 0.06
TRERF1-202ENST00000354325 ABCC2Q92887 1545 aa15.44■□□□□ 0.06
TRERF1-202ENST00000354325 USP19O94966 1318 aa15.44■□□□□ 0.06
TRERF1-202ENST00000354325 CCDC146Q8IYE0 955 aa15.44■□□□□ 0.06
TRERF1-202ENST00000354325 CFAP53Q96M91 514 aa15.44■□□□□ 0.06
TRERF1-202ENST00000354325 PDZRN3Q9UPQ7 1066 aa15.43■□□□□ 0.06
TRERF1-202ENST00000354325 PRDM15P57071 1507 aaPredicted RBP15.43■□□□□ 0.06
TRERF1-202ENST00000354325 ASXL1Q8IXJ9 1541 aa15.43■□□□□ 0.06
TRERF1-202ENST00000354325 TERF1P54274 439 aa15.43■□□□□ 0.06
TRERF1-202ENST00000354325 TRPM1Q7Z4N2 1603 aa15.42■□□□□ 0.06
TRERF1-202ENST00000354325 MFAP1P55081 439 aaKnown RBP15.42■□□□□ 0.06
TRERF1-202ENST00000354325 CCDC141Q6ZP82 1450 aa15.42■□□□□ 0.06
TRERF1-202ENST00000354325 SPRYD3Q8NCJ5 442 aa15.41■□□□□ 0.06
TRERF1-202ENST00000354325 CT47B1P0C2W7 299 aaPredicted RBP15.41■□□□□ 0.06
TRERF1-202ENST00000354325 PANK1Q8TE04 598 aa15.41■□□□□ 0.06
TRERF1-202ENST00000354325 FAM135AQ9P2D6 1515 aa15.4■□□□□ 0.06
TRERF1-202ENST00000354325 AMER1Q5JTC6 1135 aaPredicted RBP15.4■□□□□ 0.06
TRERF1-202ENST00000354325 ADCY10Q96PN6 1610 aa15.4■□□□□ 0.06
TRERF1-202ENST00000354325 WDR63Q8IWG1 891 aa15.39■□□□□ 0.05
TRERF1-202ENST00000354325 CSPP1Q1MSJ5 1256 aa15.39■□□□□ 0.05
TRERF1-202ENST00000354325 ZSCAN30Q86W11 494 aa15.39■□□□□ 0.05
TRERF1-202ENST00000354325 ZKSCAN2Q63HK3 967 aa15.38■□□□□ 0.05
TRERF1-202ENST00000354325 PBRM1Q86U86 1689 aa15.38■□□□□ 0.05
TRERF1-202ENST00000354325 SEC24BO95487 1268 aa15.37■□□□□ 0.05
TRERF1-202ENST00000354325 HNRNPMP52272 730 aaKnown RBP eCLIP15.37■□□□□ 0.05
TRERF1-202ENST00000354325 NCLP19338 710 aaKnown RBP15.37■□□□□ 0.05
TRERF1-202ENST00000354325 RUNDC1Q96C34 613 aa15.37■□□□□ 0.05
TRERF1-202ENST00000354325 PANK2Q9BZ23 570 aa15.37■□□□□ 0.05
TRERF1-202ENST00000354325 VIRMAQ69YN4 1812 aaKnown RBP15.37■□□□□ 0.05
TRERF1-202ENST00000354325 SNX21Q969T3 373 aa15.36■□□□□ 0.05
TRERF1-202ENST00000354325 TNNT2P45379 298 aaPredicted RBP15.36■□□□□ 0.05
TRERF1-202ENST00000354325 DISP1Q96F81 1524 aa15.36■□□□□ 0.05
TRERF1-202ENST00000354325 ARHGEF5Q12774 1597 aa15.36■□□□□ 0.05
TRERF1-202ENST00000354325 NASPP49321 788 aaPredicted RBP15.36■□□□□ 0.05
TRERF1-202ENST00000354325 DDX19BQ9UMR2 479 aa15.36■□□□□ 0.05
TRERF1-202ENST00000354325 HS1BP3Q53T59 392 aa15.35■□□□□ 0.05
TRERF1-202ENST00000354325 KIAA1211Q6ZU35 1233 aa15.35■□□□□ 0.05
TRERF1-202ENST00000354325 A2MP01023 1474 aa15.35■□□□□ 0.05
TRERF1-202ENST00000354325 CALD1Q05682 793 aaKnown RBP15.35■□□□□ 0.05
TRERF1-202ENST00000354325 SYNMO15061 1565 aa15.34■□□□□ 0.05
TRERF1-202ENST00000354325 IPO8O15397 1037 aaKnown RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms