RNA–Protein interactions for RNA: ENST00000353247.9

CASP1-201, Transcript of caspase 1, humanhuman

TSL 1 (best) BASIC

Gene CASP1, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1-201ENST00000353247 TSKSQ9UJT2 592 aa7.25□□□□□ -1.25
CASP1-201ENST00000353247 RNF40O75150 1001 aa7.24□□□□□ -1.25
CASP1-201ENST00000353247 SLC4A3P48751 1232 aa7.24□□□□□ -1.25
CASP1-201ENST00000353247 NCKAP5LQ9HCH0 1330 aa7.23□□□□□ -1.25
CASP1-201ENST00000353247 LCE2CQ5TA81 110 aa7.22□□□□□ -1.25
CASP1-201ENST00000353247 SLF2Q8IX21 1173 aa7.22□□□□□ -1.25
CASP1-201ENST00000353247 SENP2Q9HC62 589 aa7.22□□□□□ -1.25
CASP1-201ENST00000353247 CERKQ8TCT0 537 aa7.21□□□□□ -1.26
CASP1-201ENST00000353247 SLC16A10Q8TF71 515 aa7.21□□□□□ -1.26
CASP1-201ENST00000353247 ZCCHC6Q5VYS8 1495 aaKnown RBP7.21□□□□□ -1.26
CASP1-201ENST00000353247 ERCC6Q03468 1493 aa7.2□□□□□ -1.26
CASP1-201ENST00000353247 MFSD10Q14728 455 aa7.19□□□□□ -1.26
CASP1-201ENST00000353247 LIAT1Q6ZQX7 453 aa7.19□□□□□ -1.26
CASP1-201ENST00000353247 HS6ST3Q8IZP7 471 aa7.19□□□□□ -1.26
CASP1-201ENST00000353247 DACH1Q9UI36 760 aa7.19□□□□□ -1.26
CASP1-201ENST00000353247 RGL2O15211 777 aa7.18□□□□□ -1.26
CASP1-201ENST00000353247 TRIM47Q96LD4 638 aa7.18□□□□□ -1.26
CASP1-201ENST00000353247 EMILIN3Q9NT22 766 aa7.18□□□□□ -1.26
CASP1-201ENST00000353247 EN1Q05925 392 aaPredicted RBP7.17□□□□□ -1.26
CASP1-201ENST00000353247 KIFC2Q96AC6 838 aa7.17□□□□□ -1.26
CASP1-201ENST00000353247 CDCA7LQ96GN5 454 aa7.17□□□□□ -1.26
CASP1-201ENST00000353247 PCDHB3Q9Y5E6 796 aa7.17□□□□□ -1.26
CASP1-201ENST00000353247 PRSS12P56730 875 aa7.16□□□□□ -1.26
CASP1-201ENST00000353247 NPAS3Q8IXF0 933 aa7.16□□□□□ -1.26
CASP1-201ENST00000353247 TATDN2Q93075 761 aa7.16□□□□□ -1.26
CASP1-201ENST00000353247 RBM33Q96EV2 1170 aaKnown RBP7.16□□□□□ -1.26
CASP1-201ENST00000353247 LARP6Q9BRS8 491 aaKnown RBP7.15□□□□□ -1.26
CASP1-201ENST00000353247 PKD2L1Q9P0L9 805 aa7.15□□□□□ -1.26
CASP1-201ENST00000353247 PNMA3Q9UL41 463 aa7.15□□□□□ -1.26
CASP1-201ENST00000353247 SMAPO00193 183 aa7.14□□□□□ -1.27
CASP1-201ENST00000353247 MAP3K7O43318 606 aa7.14□□□□□ -1.27
CASP1-201ENST00000353247 IRF7Q92985 503 aa7.14□□□□□ -1.27
CASP1-201ENST00000353247 TOR4AQ9NXH8 423 aa7.14□□□□□ -1.27
CASP1-201ENST00000353247 RBM27Q9P2N5 1060 aaKnown RBP7.14□□□□□ -1.27
CASP1-201ENST00000353247 CYP4X1Q8N118 509 aa7.13□□□□□ -1.27
CASP1-201ENST00000353247 S1PR4O95977 384 aa7.12□□□□□ -1.27
CASP1-201ENST00000353247 LORP23490 312 aaPredicted RBP7.12□□□□□ -1.27
CASP1-201ENST00000353247 ATP13A2Q9NQ11 1180 aa7.12□□□□□ -1.27
CASP1-201ENST00000353247 NCAPD3P42695 1498 aa7.11□□□□□ -1.27
CASP1-201ENST00000353247 SNRPBP14678 240 aaKnown RBP7.11□□□□□ -1.27
CASP1-201ENST00000353247 KCNMA1Q12791 1236 aa7.1□□□□□ -1.27
CASP1-201ENST00000353247 FOXC1Q12948 553 aa7.1□□□□□ -1.27
CASP1-201ENST00000353247 ADH1BP00325 375 aa7.09□□□□□ -1.27
CASP1-201ENST00000353247 GMPRP36959 345 aa7.09□□□□□ -1.27
CASP1-201ENST00000353247 RPIAP49247 311 aa7.09□□□□□ -1.27
CASP1-201ENST00000353247 TLL1O43897 1013 aa7.08□□□□□ -1.28
CASP1-201ENST00000353247 NBR1Q14596 966 aa7.08□□□□□ -1.28
CASP1-201ENST00000353247 TSR1Q2NL82 804 aaKnown RBP7.08□□□□□ -1.28
CASP1-201ENST00000353247 BLOC1S3Q6QNY0 202 aa7.08□□□□□ -1.28
CASP1-201ENST00000353247 NXF1Q9UBU9 619 aaKnown RBP7.08□□□□□ -1.28
CASP1-201ENST00000353247 KCTD17Q8N5Z5 321 aa7.07□□□□□ -1.28
CASP1-201ENST00000353247 RNF225M0QZC1 329 aaPredicted RBP7.06□□□□□ -1.28
CASP1-201ENST00000353247 PPEF1O14829 653 aaPredicted RBP7.06□□□□□ -1.28
CASP1-201ENST00000353247 FAM198AQ9UFP1 575 aa7.06□□□□□ -1.28
CASP1-201ENST00000353247 SWT1Q5T5J6 900 aaKnown RBP7.05□□□□□ -1.28
CASP1-201ENST00000353247 NUDT18Q6ZVK8 323 aa7.05□□□□□ -1.28
CASP1-201ENST00000353247 DDX12PQ92771 950 aa7.05□□□□□ -1.28
CASP1-201ENST00000353247 CD2BP2O95400 341 aaKnown RBP7.04□□□□□ -1.28
CASP1-201ENST00000353247 SLC6A16Q9GZN6 736 aa7.04□□□□□ -1.28
CASP1-201ENST00000353247 PLA2G2CQ5R387 149 aa7.03□□□□□ -1.28
CASP1-201ENST00000353247 XP32Q5T750 250 aa7.03□□□□□ -1.28
CASP1-201ENST00000353247 KRTAP4-8Q9BYQ9 185 aa7.03□□□□□ -1.28
CASP1-201ENST00000353247 CAMK2BQ13554 666 aa7.02□□□□□ -1.29
CASP1-201ENST00000353247 TMEM151AQ8N4L1 468 aa7.02□□□□□ -1.29
CASP1-201ENST00000353247 SMARCA2P51531 1590 aa7.02□□□□□ -1.29
CASP1-201ENST00000353247 ATAD2BQ9ULI0 1458 aa7.01□□□□□ -1.29
CASP1-201ENST00000353247 TTC24A2A3L6 582 aaPredicted RBP7.01□□□□□ -1.29
CASP1-201ENST00000353247 C3orf80F5H4A9 247 aa7.01□□□□□ -1.29
CASP1-201ENST00000353247 NR1I2O75469 434 aa7.01□□□□□ -1.29
CASP1-201ENST00000353247 IGHA1P01876 353 aa7.01□□□□□ -1.29
CASP1-201ENST00000353247 PKD2Q13563 968 aa7.01□□□□□ -1.29
CASP1-201ENST00000353247 KMT5BQ4FZB7 885 aa7.01□□□□□ -1.29
CASP1-201ENST00000353247 HMGXB3Q12766 1538 aa7.01□□□□□ -1.29
CASP1-201ENST00000353247 H3BM21 787 aa7□□□□□ -1.29
CASP1-201ENST00000353247 DPYSL4O14531 572 aa7□□□□□ -1.29
CASP1-201ENST00000353247 NESP48681 1621 aa7□□□□□ -1.29
CASP1-201ENST00000353247 THOC2Q8NI27 1593 aaKnown RBP6.99□□□□□ -1.29
CASP1-201ENST00000353247 LAMC3Q9Y6N6 1575 aa6.99□□□□□ -1.29
CASP1-201ENST00000353247 ACTN4O43707 911 aaKnown RBP6.99□□□□□ -1.29
CASP1-201ENST00000353247 PDS5BQ9NTI5 1447 aa6.99□□□□□ -1.29
CASP1-201ENST00000353247 GSK3AP49840 483 aa6.98□□□□□ -1.29
CASP1-201ENST00000353247 GDF11O95390 407 aa6.97□□□□□ -1.29
CASP1-201ENST00000353247 PDIA6Q15084 440 aa6.96□□□□□ -1.3
CASP1-201ENST00000353247 SNIP1Q8TAD8 396 aaKnown RBP6.96□□□□□ -1.3
CASP1-201ENST00000353247 NKX1-1Q15270 411 aaPredicted RBP6.95□□□□□ -1.3
CASP1-201ENST00000353247 SMPD1P17405 629 aa6.94□□□□□ -1.3
CASP1-201ENST00000353247 TTC13Q8NBP0 860 aa6.94□□□□□ -1.3
CASP1-201ENST00000353247 BAZ1BQ9UIG0 1483 aaKnown RBP6.93□□□□□ -1.3
CASP1-201ENST00000353247 WNT7AO00755 349 aa6.93□□□□□ -1.3
CASP1-201ENST00000353247 CHGAP10645 457 aaKnown RBP6.93□□□□□ -1.3
CASP1-201ENST00000353247 FOXK2Q01167 660 aa6.93□□□□□ -1.3
CASP1-201ENST00000353247 RASSF7Q02833 373 aa6.93□□□□□ -1.3
CASP1-201ENST00000353247 KIF21AQ7Z4S6 1674 aa6.93□□□□□ -1.3
CASP1-201ENST00000353247 SMARCA4P51532 1647 aa6.92□□□□□ -1.3
CASP1-201ENST00000353247 SPDYE16A6NNV3 312 aaPredicted RBP6.92□□□□□ -1.3
CASP1-201ENST00000353247 REPIN1Q9BWE0 567 aaKnown RBP6.92□□□□□ -1.3
CASP1-201ENST00000353247 VSIG8P0DPA2 414 aa6.91□□□□□ -1.3
CASP1-201ENST00000353247 DNMT3AQ9Y6K1 912 aaPredicted RBP6.91□□□□□ -1.3
CASP1-201ENST00000353247 ERBB4Q15303 1308 aa6.91□□□□□ -1.3
CASP1-201ENST00000353247 BAZ1AQ9NRL2 1556 aaPredicted RBP6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms