RNA–Protein interactions for RNA: ENST00000350092.8

PTBP1-202, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,069 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-202ENST00000350092 ABCC2Q92887 1545 aa20.91■□□□□ 0.94
PTBP1-202ENST00000350092 ASXL1Q8IXJ9 1541 aa20.9■□□□□ 0.94
PTBP1-202ENST00000350092 PIK3C2GO75747 1445 aa20.9■□□□□ 0.94
PTBP1-202ENST00000350092 CHD1O14646 1710 aa20.9■□□□□ 0.94
PTBP1-202ENST00000350092 PPP2R1AP30153 589 aa20.89■□□□□ 0.93
PTBP1-202ENST00000350092 DEPDC5O75140 1603 aa20.89■□□□□ 0.93
PTBP1-202ENST00000350092 CLTCL1P53675 1640 aa20.89■□□□□ 0.93
PTBP1-202ENST00000350092 ABCC1P33527 1531 aa20.88■□□□□ 0.93
PTBP1-202ENST00000350092 SCAPERQ9BY12 1400 aa20.88■□□□□ 0.93
PTBP1-202ENST00000350092 KDM5AP29375 1690 aaKnown RBP20.87■□□□□ 0.93
PTBP1-202ENST00000350092 AMER1Q5JTC6 1135 aaPredicted RBP20.87■□□□□ 0.93
PTBP1-202ENST00000350092 CENPQQ7L2Z9 268 aaPredicted RBP20.87■□□□□ 0.93
PTBP1-202ENST00000350092 IL27Q8NEV9 243 aa20.86■□□□□ 0.93
PTBP1-202ENST00000350092 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.85■□□□□ 0.931e-7■■□□□ 14.5
PTBP1-202ENST00000350092 C8orf34Q49A92 452 aa20.85■□□□□ 0.93
PTBP1-202ENST00000350092 SCAF11Q99590 1463 aaKnown RBP20.85■□□□□ 0.93
PTBP1-202ENST00000350092 NPC1L1Q9UHC9 1359 aa20.84■□□□□ 0.93
PTBP1-202ENST00000350092 TRMT2AQ8IZ69 625 aaKnown RBP20.84■□□□□ 0.93
PTBP1-202ENST00000350092 NEURL4Q96JN8 1562 aa20.82■□□□□ 0.92
PTBP1-202ENST00000350092 PTPRTO14522 1441 aa20.81■□□□□ 0.92
PTBP1-202ENST00000350092 TET3O43151 1660 aa20.81■□□□□ 0.92
PTBP1-202ENST00000350092 SLFN5Q08AF3 891 aa20.8■□□□□ 0.92
PTBP1-202ENST00000350092 EIF3AQ14152 1382 aaKnown RBP20.8■□□□□ 0.92
PTBP1-202ENST00000350092 ZCCHC11Q5TAX3 1644 aaKnown RBP20.79■□□□□ 0.92
PTBP1-202ENST00000350092 IFT172Q9UG01 1749 aa20.79■□□□□ 0.92
PTBP1-202ENST00000350092 FAM161AQ3B820 660 aa20.79■□□□□ 0.92
PTBP1-202ENST00000350092 GOLGA2Q08379 1002 aa20.79■□□□□ 0.92
PTBP1-202ENST00000350092 ERCC6L2Q5T890 1561 aa20.78■□□□□ 0.92
PTBP1-202ENST00000350092 PLCH2O75038 1416 aa20.78■□□□□ 0.92
PTBP1-202ENST00000350092 VWDEQ8N2E2 1590 aa20.78■□□□□ 0.92
PTBP1-202ENST00000350092 ZFYVE16Q7Z3T8 1539 aa20.78■□□□□ 0.92
PTBP1-202ENST00000350092 NKTRP30414 1462 aaKnown RBP20.77■□□□□ 0.92
PTBP1-202ENST00000350092 WDR43Q15061 677 aaKnown RBP eCLIP20.77■□□□□ 0.928e-6■■□□□ 11.7
PTBP1-202ENST00000350092 KNSTRNQ9Y448 316 aa20.77■□□□□ 0.92
PTBP1-202ENST00000350092 MYO3AQ8NEV4 1616 aa20.77■□□□□ 0.91
PTBP1-202ENST00000350092 NFKBIBQ15653 356 aa20.76■□□□□ 0.91
PTBP1-202ENST00000350092 ABCA6Q8N139 1617 aa20.76■□□□□ 0.91
PTBP1-202ENST00000350092 SHPRHQ149N8 1683 aa20.76■□□□□ 0.91
PTBP1-202ENST00000350092 TRAPPC8Q9Y2L5 1435 aa20.74■□□□□ 0.91
PTBP1-202ENST00000350092 MAP3K4Q9Y6R4 1608 aa20.73■□□□□ 0.91
PTBP1-202ENST00000350092 SPINK5Q9NQ38 1064 aaPredicted RBP20.73■□□□□ 0.91
PTBP1-202ENST00000350092 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.72■□□□□ 0.91
PTBP1-202ENST00000350092 ERVK-7P63135 1459 aa20.72■□□□□ 0.91
PTBP1-202ENST00000350092 SLC4A3P48751 1232 aa20.72■□□□□ 0.91
PTBP1-202ENST00000350092 GSE1Q14687 1217 aa20.72■□□□□ 0.91
PTBP1-202ENST00000350092 CDCA8Q53HL2 280 aa20.71■□□□□ 0.91
PTBP1-202ENST00000350092 INO80Q9ULG1 1556 aaPredicted RBP20.7■□□□□ 0.9
PTBP1-202ENST00000350092 ZC3H13Q5T200 1668 aaKnown RBP20.7■□□□□ 0.9
PTBP1-202ENST00000350092 RTEL1-TNFRSF6BF6WH68 1400 aa20.7■□□□□ 0.9
PTBP1-202ENST00000350092 ARAP3Q8WWN8 1544 aa20.7■□□□□ 0.9
PTBP1-202ENST00000350092 STAC3Q96MF2 364 aa20.69■□□□□ 0.9
PTBP1-202ENST00000350092 MYOM2P54296 1465 aa20.69■□□□□ 0.9
PTBP1-202ENST00000350092 MROH2AA6NES4 1674 aa20.68■□□□□ 0.9
PTBP1-202ENST00000350092 MROH1Q8NDA8 1641 aa20.68■□□□□ 0.9
PTBP1-202ENST00000350092 NLRP1Q9C000 1473 aa20.67■□□□□ 0.9
PTBP1-202ENST00000350092 CCDC146Q8IYE0 955 aa20.66■□□□□ 0.9
PTBP1-202ENST00000350092 ANO8Q9HCE9 1232 aaPredicted RBP20.66■□□□□ 0.9
PTBP1-202ENST00000350092 KIF1BO60333 1816 aa20.66■□□□□ 0.9
PTBP1-202ENST00000350092 USP19O94966 1318 aa20.66■□□□□ 0.9
PTBP1-202ENST00000350092 UHRF1BP1LA0JNW5 1464 aa20.65■□□□□ 0.9
PTBP1-202ENST00000350092 FRAT1Q92837 279 aaPredicted RBP20.64■□□□□ 0.89
PTBP1-202ENST00000350092 NINLQ9Y2I6 1382 aa20.64■□□□□ 0.89
PTBP1-202ENST00000350092 BCAR3O75815 825 aa20.64■□□□□ 0.89
PTBP1-202ENST00000350092 DMRT2Q9Y5R5 561 aa20.64■□□□□ 0.89
PTBP1-202ENST00000350092 IQSEC2Q5JU85 1478 aa20.63■□□□□ 0.89
PTBP1-202ENST00000350092 RTN4Q9NQC3 1192 aaKnown RBP20.63■□□□□ 0.89
PTBP1-202ENST00000350092 E9PSI1 815 aa20.62■□□□□ 0.89
PTBP1-202ENST00000350092 APAF1O14727 1248 aa20.62■□□□□ 0.89
PTBP1-202ENST00000350092 BRPF3Q9ULD4 1205 aa20.62■□□□□ 0.89
PTBP1-202ENST00000350092 NRXN1Q9ULB1 1477 aa20.62■□□□□ 0.89
PTBP1-202ENST00000350092 ABCA9Q8IUA7 1624 aa20.62■□□□□ 0.89
PTBP1-202ENST00000350092 IGHDP01880 384 aa20.62■□□□□ 0.89
PTBP1-202ENST00000350092 USP32Q8NFA0 1604 aa20.61■□□□□ 0.89
PTBP1-202ENST00000350092 RGS3P49796 1198 aa20.61■□□□□ 0.89
PTBP1-202ENST00000350092 UGGT1Q9NYU2 1555 aa20.61■□□□□ 0.89
PTBP1-202ENST00000350092 ATP7AQ04656 1500 aa20.6■□□□□ 0.89
PTBP1-202ENST00000350092 EFCAB2Q5VUJ9 269 aa20.6■□□□□ 0.89
PTBP1-202ENST00000350092 NGEFQ8N5V2 710 aa20.59■□□□□ 0.89
PTBP1-202ENST00000350092 POLR3AO14802 1390 aaPredicted RBP20.59■□□□□ 0.89
PTBP1-202ENST00000350092 CARD14Q9BXL6 1004 aa20.59■□□□□ 0.89
PTBP1-202ENST00000350092 SETBP1Q9Y6X0 1596 aa20.58■□□□□ 0.88
PTBP1-202ENST00000350092 PDE3AQ14432 1141 aa20.57■□□□□ 0.88
PTBP1-202ENST00000350092 FRAT2O75474 233 aaPredicted RBP20.57■□□□□ 0.88
PTBP1-202ENST00000350092 DAXXQ9UER7 740 aaPredicted RBP20.57■□□□□ 0.88
PTBP1-202ENST00000350092 CGNL1Q0VF96 1302 aa20.57■□□□□ 0.88
PTBP1-202ENST00000350092 SBNO2Q9Y2G9 1366 aa20.57■□□□□ 0.88
PTBP1-202ENST00000350092 EFCAB6Q5THR3 1501 aa20.56■□□□□ 0.88
PTBP1-202ENST00000350092 QRICH2Q9H0J4 1663 aa20.56■□□□□ 0.88
PTBP1-202ENST00000350092 PPRC1Q5VV67 1664 aaKnown RBP20.55■□□□□ 0.88
PTBP1-202ENST00000350092 SPAG9O60271 1321 aaKnown RBP20.55■□□□□ 0.88
PTBP1-202ENST00000350092 ZMYM3Q14202 1370 aa20.53■□□□□ 0.88
PTBP1-202ENST00000350092 PPLO60437 1756 aa20.53■□□□□ 0.88
PTBP1-202ENST00000350092 CLUAP1Q96AJ1 413 aa20.52■□□□□ 0.88
PTBP1-202ENST00000350092 ADGRB3O60242 1522 aa20.52■□□□□ 0.88
PTBP1-202ENST00000350092 CENPJQ9HC77 1338 aaPredicted RBP20.52■□□□□ 0.87
PTBP1-202ENST00000350092 MAPK8IP3Q9UPT6 1336 aa20.52■□□□□ 0.87
PTBP1-202ENST00000350092 SEC24BO95487 1268 aa20.51■□□□□ 0.87
PTBP1-202ENST00000350092 WWC1Q8IX03 1113 aa20.51■□□□□ 0.87
PTBP1-202ENST00000350092 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
PTBP1-202ENST00000350092 ADGRF5Q8IZF2 1346 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms