RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 ABCC1P33527 1531 aa23.77■■□□□ 1.4
PTP4A3-202ENST00000349124 APAF1O14727 1248 aa23.77■■□□□ 1.4
PTP4A3-202ENST00000349124 ADGRF5Q8IZF2 1346 aa23.76■■□□□ 1.39
PTP4A3-202ENST00000349124 SCAF11Q99590 1463 aaKnown RBP23.76■■□□□ 1.39
PTP4A3-202ENST00000349124 CDCA8Q53HL2 280 aa23.76■■□□□ 1.39
PTP4A3-202ENST00000349124 MADDQ8WXG6 1647 aa23.75■■□□□ 1.39
PTP4A3-202ENST00000349124 CARD14Q9BXL6 1004 aa23.75■■□□□ 1.39
PTP4A3-202ENST00000349124 ZCCHC11Q5TAX3 1644 aaKnown RBP23.74■■□□□ 1.39
PTP4A3-202ENST00000349124 RNF17Q9BXT8 1623 aaKnown RBP23.74■■□□□ 1.39
PTP4A3-202ENST00000349124 DMRT2Q9Y5R5 561 aa23.74■■□□□ 1.39
PTP4A3-202ENST00000349124 PTPRTO14522 1441 aa23.73■■□□□ 1.39
PTP4A3-202ENST00000349124 SLFN5Q08AF3 891 aa23.73■■□□□ 1.39
PTP4A3-202ENST00000349124 RTL5Q5HYW3 569 aaPredicted RBP23.73■■□□□ 1.39
PTP4A3-202ENST00000349124 KDM2BQ8NHM5 1336 aa23.72■■□□□ 1.39
PTP4A3-202ENST00000349124 BCAR3O75815 825 aa23.71■■□□□ 1.39
PTP4A3-202ENST00000349124 SCAPERQ9BY12 1400 aa23.7■■□□□ 1.39
PTP4A3-202ENST00000349124 CLTCL1P53675 1640 aa23.7■■□□□ 1.38
PTP4A3-202ENST00000349124 SLC4A3P48751 1232 aa23.69■■□□□ 1.38
PTP4A3-202ENST00000349124 TRPM2O94759 1503 aa23.69■■□□□ 1.38
PTP4A3-202ENST00000349124 UGGT1Q9NYU2 1555 aa23.68■■□□□ 1.38
PTP4A3-202ENST00000349124 ASXL1Q8IXJ9 1541 aa23.68■■□□□ 1.38
PTP4A3-202ENST00000349124 IQGAP1P46940 1657 aa23.67■■□□□ 1.38
PTP4A3-202ENST00000349124 RTEL1-TNFRSF6BF6WH68 1400 aa23.67■■□□□ 1.38
PTP4A3-202ENST00000349124 ZFYVE16Q7Z3T8 1539 aa23.66■■□□□ 1.38
PTP4A3-202ENST00000349124 CHGAP10645 457 aaKnown RBP23.66■■□□□ 1.38
PTP4A3-202ENST00000349124 TNNT2P45379 298 aaPredicted RBP23.66■■□□□ 1.38
PTP4A3-202ENST00000349124 NEFMP07197 916 aa23.65■■□□□ 1.38
PTP4A3-202ENST00000349124 TRMT2AQ8IZ69 625 aaKnown RBP23.65■■□□□ 1.38
PTP4A3-202ENST00000349124 KANK1Q14678 1352 aa23.65■■□□□ 1.38
PTP4A3-202ENST00000349124 RGS3P49796 1198 aa23.64■■□□□ 1.38
PTP4A3-202ENST00000349124 STAC3Q96MF2 364 aa23.64■■□□□ 1.38
PTP4A3-202ENST00000349124 CENPQQ7L2Z9 268 aaPredicted RBP23.63■■□□□ 1.37
PTP4A3-202ENST00000349124 PIK3C2GO75747 1445 aa23.63■■□□□ 1.37
PTP4A3-202ENST00000349124 UHRF1BP1LA0JNW5 1464 aa23.63■■□□□ 1.37
PTP4A3-202ENST00000349124 EIF3AQ14152 1382 aaKnown RBP23.62■■□□□ 1.37
PTP4A3-202ENST00000349124 SYNMO15061 1565 aa23.61■■□□□ 1.37
PTP4A3-202ENST00000349124 TRAK1Q9UPV9 953 aa23.61■■□□□ 1.37
PTP4A3-202ENST00000349124 FANCAO15360 1455 aa23.6■■□□□ 1.37
PTP4A3-202ENST00000349124 NEUROD2Q15784 382 aa23.6■■□□□ 1.37
PTP4A3-202ENST00000349124 SPHKAPQ2M3C7 1700 aa23.6■■□□□ 1.37
PTP4A3-202ENST00000349124 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.6■■□□□ 1.37
PTP4A3-202ENST00000349124 ERVK-7P63135 1459 aa23.6■■□□□ 1.37
PTP4A3-202ENST00000349124 NPC1L1Q9UHC9 1359 aa23.58■■□□□ 1.37
PTP4A3-202ENST00000349124 SLC12A5Q9H2X9 1139 aa23.58■■□□□ 1.37
PTP4A3-202ENST00000349124 TMEM132EQ6IEE7 984 aa23.58■■□□□ 1.36
PTP4A3-202ENST00000349124 RRP7AQ9Y3A4 280 aaKnown RBP23.58■■□□□ 1.36
PTP4A3-202ENST00000349124 C8orf34Q49A92 452 aa23.57■■□□□ 1.36
PTP4A3-202ENST00000349124 ATP7AQ04656 1500 aa23.56■■□□□ 1.36
PTP4A3-202ENST00000349124 MYOM1P52179 1685 aa23.56■■□□□ 1.36
PTP4A3-202ENST00000349124 CEP152O94986 1710 aa23.55■■□□□ 1.36
PTP4A3-202ENST00000349124 IGHDP01880 384 aa23.55■■□□□ 1.36
PTP4A3-202ENST00000349124 SENP3Q9H4L4 574 aaPredicted RBP23.55■■□□□ 1.36
PTP4A3-202ENST00000349124 CLASP1Q7Z460 1538 aa23.54■■□□□ 1.36
PTP4A3-202ENST00000349124 E9PSI1 815 aa23.54■■□□□ 1.36
PTP4A3-202ENST00000349124 NUTM2DQ5VT03 806 aaPredicted RBP23.54■■□□□ 1.36
PTP4A3-202ENST00000349124 ADGRL1O94910 1474 aa23.53■■□□□ 1.36
PTP4A3-202ENST00000349124 FAM161AQ3B820 660 aa23.53■■□□□ 1.36
PTP4A3-202ENST00000349124 WWC1Q8IX03 1113 aa23.53■■□□□ 1.36
PTP4A3-202ENST00000349124 GGT6Q6P531 493 aa23.52■■□□□ 1.36
PTP4A3-202ENST00000349124 PANK1Q8TE04 598 aa23.52■■□□□ 1.36
PTP4A3-202ENST00000349124 TET3O43151 1660 aa23.52■■□□□ 1.36
PTP4A3-202ENST00000349124 NKTRP30414 1462 aaKnown RBP23.51■■□□□ 1.35
PTP4A3-202ENST00000349124 DEPDC5O75140 1603 aa23.51■■□□□ 1.35
PTP4A3-202ENST00000349124 NOS1P29475 1434 aa23.5■■□□□ 1.35
PTP4A3-202ENST00000349124 CENPJQ9HC77 1338 aaPredicted RBP23.5■■□□□ 1.35
PTP4A3-202ENST00000349124 MORC1Q86VD1 984 aa23.5■■□□□ 1.35
PTP4A3-202ENST00000349124 VWDEQ8N2E2 1590 aa23.5■■□□□ 1.35
PTP4A3-202ENST00000349124 COG6Q9Y2V7 657 aa23.5■■□□□ 1.35
PTP4A3-202ENST00000349124 DDRGK1Q96HY6 314 aa23.49■■□□□ 1.35
PTP4A3-202ENST00000349124 FRAT1Q92837 279 aaPredicted RBP23.48■■□□□ 1.35
PTP4A3-202ENST00000349124 ABCA6Q8N139 1617 aa23.47■■□□□ 1.35
PTP4A3-202ENST00000349124 TNNQ9UQP3 1299 aa23.46■■□□□ 1.35
PTP4A3-202ENST00000349124 KDM5AP29375 1690 aaKnown RBP23.46■■□□□ 1.35
PTP4A3-202ENST00000349124 PPM1GO15355 546 aaPredicted RBP23.46■■□□□ 1.35
PTP4A3-202ENST00000349124 MAP3K4Q9Y6R4 1608 aa23.46■■□□□ 1.35
PTP4A3-202ENST00000349124 NSD3Q9BZ95 1437 aa23.46■■□□□ 1.35
PTP4A3-202ENST00000349124 MROH1Q8NDA8 1641 aa23.45■■□□□ 1.35
PTP4A3-202ENST00000349124 ARAP3Q8WWN8 1544 aa23.45■■□□□ 1.34
PTP4A3-202ENST00000349124 INO80Q9ULG1 1556 aaPredicted RBP23.45■■□□□ 1.34
PTP4A3-202ENST00000349124 BCL2L13Q9BXK5 485 aa23.45■■□□□ 1.34
PTP4A3-202ENST00000349124 CANXP27824 592 aaKnown RBP23.44■■□□□ 1.34
PTP4A3-202ENST00000349124 TCP11L2Q8N4U5 519 aa23.44■■□□□ 1.34
PTP4A3-202ENST00000349124 MYOM2P54296 1465 aa23.43■■□□□ 1.34
PTP4A3-202ENST00000349124 SLC24A1O60721 1099 aa23.43■■□□□ 1.34
PTP4A3-202ENST00000349124 MTHFSP49914 203 aa23.43■■□□□ 1.34
PTP4A3-202ENST00000349124 C14orf93Q9H972 538 aaKnown RBP23.42■■□□□ 1.34
PTP4A3-202ENST00000349124 POLR3AO14802 1390 aaPredicted RBP23.42■■□□□ 1.34
PTP4A3-202ENST00000349124 ASXL2Q76L83 1435 aa23.41■■□□□ 1.34
PTP4A3-202ENST00000349124 NFKBIBQ15653 356 aa23.41■■□□□ 1.34
PTP4A3-202ENST00000349124 USP35Q9P2H5 1018 aa23.41■■□□□ 1.34
PTP4A3-202ENST00000349124 SAFB2Q14151 953 aaKnown RBP eCLIP23.41■■□□□ 1.34
PTP4A3-202ENST00000349124 DAXXQ9UER7 740 aaPredicted RBP23.41■■□□□ 1.34
PTP4A3-202ENST00000349124 ABCA9Q8IUA7 1624 aa23.4■■□□□ 1.34
PTP4A3-202ENST00000349124 SEC24BO95487 1268 aa23.39■■□□□ 1.34
PTP4A3-202ENST00000349124 IL27Q8NEV9 243 aa23.39■■□□□ 1.34
PTP4A3-202ENST00000349124 CFAP65Q6ZU64 1925 aaKnown RBP23.39■■□□□ 1.34
PTP4A3-202ENST00000349124 RLBP1P12271 317 aa23.39■■□□□ 1.33
PTP4A3-202ENST00000349124 PDE3AQ14432 1141 aa23.38■■□□□ 1.33
PTP4A3-202ENST00000349124 CLUAP1Q96AJ1 413 aa23.38■■□□□ 1.33
PTP4A3-202ENST00000349124 RUNDC1Q96C34 613 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms