RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 POGKQ9P215 609 aa13.36□□□□□ -0.27
CHRNA1-202ENST00000348749 TMF1P82094 1093 aa13.36□□□□□ -0.27
CHRNA1-202ENST00000348749 STAC3Q96MF2 364 aa13.36□□□□□ -0.27
CHRNA1-202ENST00000348749 TESK2Q96S53 571 aa13.36□□□□□ -0.27
CHRNA1-202ENST00000348749 DUOX2Q9NRD8 1548 aa13.35□□□□□ -0.27
CHRNA1-202ENST00000348749 CLCN1P35523 988 aa13.35□□□□□ -0.27
CHRNA1-202ENST00000348749 HNRNPMP52272 730 aaKnown RBP eCLIP13.34□□□□□ -0.27
CHRNA1-202ENST00000348749 VSIG10Q8N0Z9 540 aa13.34□□□□□ -0.27
CHRNA1-202ENST00000348749 HSP90AA2PQ14568 343 aaPredicted RBP13.33□□□□□ -0.28
CHRNA1-202ENST00000348749 DISP3Q9P2K9 1392 aa13.33□□□□□ -0.28
CHRNA1-202ENST00000348749 C20orf194Q5TEA3 1177 aa13.32□□□□□ -0.28
CHRNA1-202ENST00000348749 SYCP2Q9BX26 1530 aa13.32□□□□□ -0.28
CHRNA1-202ENST00000348749 HSP90AA1P07900 732 aaKnown RBP13.32□□□□□ -0.28
CHRNA1-202ENST00000348749 PNNQ9H307 717 aaKnown RBP13.32□□□□□ -0.28
CHRNA1-202ENST00000348749 IQGAP1P46940 1657 aa13.32□□□□□ -0.28
CHRNA1-202ENST00000348749 SYNMO15061 1565 aa13.32□□□□□ -0.28
CHRNA1-202ENST00000348749 NPC1L1Q9UHC9 1359 aa13.31□□□□□ -0.28
CHRNA1-202ENST00000348749 USP19O94966 1318 aa13.31□□□□□ -0.28
CHRNA1-202ENST00000348749 CDCA8Q53HL2 280 aa13.31□□□□□ -0.28
CHRNA1-202ENST00000348749 FSD2A1L4K1 749 aa13.3□□□□□ -0.28
CHRNA1-202ENST00000348749 BECN1Q14457 450 aa13.3□□□□□ -0.28
CHRNA1-202ENST00000348749 NAP1L5Q96NT1 182 aaPredicted RBP13.3□□□□□ -0.28
CHRNA1-202ENST00000348749 PANK3Q9H999 370 aa13.3□□□□□ -0.28
CHRNA1-202ENST00000348749 EIF3AQ14152 1382 aaKnown RBP13.3□□□□□ -0.28
CHRNA1-202ENST00000348749 ARHGAP5Q13017 1502 aa13.29□□□□□ -0.28
CHRNA1-202ENST00000348749 NBPF1Q3BBV0 1214 aa13.29□□□□□ -0.28
CHRNA1-202ENST00000348749 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.29□□□□□ -0.28
CHRNA1-202ENST00000348749 PIK3C2GO75747 1445 aa13.29□□□□□ -0.28
CHRNA1-202ENST00000348749 SCAPERQ9BY12 1400 aa13.29□□□□□ -0.28
CHRNA1-202ENST00000348749 WDR7Q9Y4E6 1490 aa13.28□□□□□ -0.28
CHRNA1-202ENST00000348749 SLC24A1O60721 1099 aa13.28□□□□□ -0.28
CHRNA1-202ENST00000348749 NGEFQ8N5V2 710 aa13.28□□□□□ -0.28
CHRNA1-202ENST00000348749 NEURL4Q96JN8 1562 aa13.28□□□□□ -0.28
CHRNA1-202ENST00000348749 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.28□□□□□ -0.28
CHRNA1-202ENST00000348749 MADDQ8WXG6 1647 aa13.28□□□□□ -0.28
CHRNA1-202ENST00000348749 KIAA1210Q9ULL0 1709 aa13.27□□□□□ -0.28
CHRNA1-202ENST00000348749 TTC37Q6PGP7 1564 aa13.27□□□□□ -0.28
CHRNA1-202ENST00000348749 ANTXR1Q9H6X2 564 aa13.27□□□□□ -0.28
CHRNA1-202ENST00000348749 SPHKAPQ2M3C7 1700 aa13.27□□□□□ -0.29
CHRNA1-202ENST00000348749 XRCC6P12956 609 aaKnown RBP eCLIP13.27□□□□□ -0.29
CHRNA1-202ENST00000348749 AEBP2Q6ZN18 517 aaPredicted RBP13.27□□□□□ -0.29
CHRNA1-202ENST00000348749 NLRP1Q9C000 1473 aa13.26□□□□□ -0.29
CHRNA1-202ENST00000348749 ZNF521Q96K83 1311 aa13.26□□□□□ -0.29
CHRNA1-202ENST00000348749 GOLGA6L3A6NEY3 463 aa13.26□□□□□ -0.29
CHRNA1-202ENST00000348749 FBLN2P98095 1184 aa13.26□□□□□ -0.29
CHRNA1-202ENST00000348749 ABCC2Q92887 1545 aa13.26□□□□□ -0.29
CHRNA1-202ENST00000348749 SHROOM2Q13796 1616 aa13.26□□□□□ -0.29
CHRNA1-202ENST00000348749 RGS3P49796 1198 aa13.25□□□□□ -0.29
CHRNA1-202ENST00000348749 CC2D1BQ5T0F9 858 aaKnown RBP13.25□□□□□ -0.29
CHRNA1-202ENST00000348749 DUSP27Q5VZP5 1158 aa13.25□□□□□ -0.29
CHRNA1-202ENST00000348749 CEP152O94986 1710 aa13.25□□□□□ -0.29
CHRNA1-202ENST00000348749 ASXL1Q8IXJ9 1541 aa13.25□□□□□ -0.29
CHRNA1-202ENST00000348749 TRHP20396 242 aaPredicted RBP13.25□□□□□ -0.29
CHRNA1-202ENST00000348749 TRPM2O94759 1503 aa13.25□□□□□ -0.29
CHRNA1-202ENST00000348749 SCAF11Q99590 1463 aaKnown RBP13.24□□□□□ -0.29
CHRNA1-202ENST00000348749 CYB5RLQ6IPT4 315 aa13.24□□□□□ -0.29
CHRNA1-202ENST00000348749 WDR43Q15061 677 aaKnown RBP eCLIP13.23□□□□□ -0.29
CHRNA1-202ENST00000348749 RGL3Q3MIN7 710 aa13.23□□□□□ -0.29
CHRNA1-202ENST00000348749 KNSTRNQ9Y448 316 aa13.23□□□□□ -0.29
CHRNA1-202ENST00000348749 MAPK8IP3Q9UPT6 1336 aa13.23□□□□□ -0.29
CHRNA1-202ENST00000348749 PPP2R1AP30153 589 aa13.22□□□□□ -0.29
CHRNA1-202ENST00000348749 GOLGA2Q08379 1002 aa13.22□□□□□ -0.29
CHRNA1-202ENST00000348749 ADAMTS8Q9UP79 889 aa13.22□□□□□ -0.29
CHRNA1-202ENST00000348749 ZMYM3Q14202 1370 aa13.22□□□□□ -0.29
CHRNA1-202ENST00000348749 NINLQ9Y2I6 1382 aa13.22□□□□□ -0.29
CHRNA1-202ENST00000348749 CENPJQ9HC77 1338 aaPredicted RBP13.21□□□□□ -0.29
CHRNA1-202ENST00000348749 PTPRTO14522 1441 aa13.21□□□□□ -0.29
CHRNA1-202ENST00000348749 AMER1Q5JTC6 1135 aaPredicted RBP13.21□□□□□ -0.29
CHRNA1-202ENST00000348749 TRMT2AQ8IZ69 625 aaKnown RBP13.21□□□□□ -0.29
CHRNA1-202ENST00000348749 ARAP3Q8WWN8 1544 aa13.21□□□□□ -0.3
CHRNA1-202ENST00000348749 RTEL1-TNFRSF6BF6WH68 1400 aa13.2□□□□□ -0.3
CHRNA1-202ENST00000348749 MYOM1P52179 1685 aa13.2□□□□□ -0.3
CHRNA1-202ENST00000348749 SLKQ9H2G2 1235 aaPredicted RBP13.2□□□□□ -0.3
CHRNA1-202ENST00000348749 ISY1Q9ULR0 285 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-202ENST00000348749 PLEKHH1Q9ULM0 1364 aa13.2□□□□□ -0.3
CHRNA1-202ENST00000348749 KDM5AP29375 1690 aaKnown RBP13.2□□□□□ -0.3
CHRNA1-202ENST00000348749 PLCH2O75038 1416 aa13.2□□□□□ -0.3
CHRNA1-202ENST00000348749 ABCC1P33527 1531 aa13.2□□□□□ -0.3
CHRNA1-202ENST00000348749 MRE11P49959 708 aa13.2□□□□□ -0.3
CHRNA1-202ENST00000348749 DEPDC5O75140 1603 aa13.19□□□□□ -0.3
CHRNA1-202ENST00000348749 SLFN5Q08AF3 891 aa13.19□□□□□ -0.3
CHRNA1-202ENST00000348749 TPM2P07951 284 aa13.18□□□□□ -0.3
CHRNA1-202ENST00000348749 PANK2Q9BZ23 570 aa13.18□□□□□ -0.3
CHRNA1-202ENST00000348749 NKTRP30414 1462 aaKnown RBP13.18□□□□□ -0.3
CHRNA1-202ENST00000348749 TET3O43151 1660 aa13.18□□□□□ -0.3
CHRNA1-202ENST00000348749 MCM4P33991 863 aa13.18□□□□□ -0.3
CHRNA1-202ENST00000348749 SEC24BO95487 1268 aa13.17□□□□□ -0.3
CHRNA1-202ENST00000348749 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.17□□□□□ -0.3
CHRNA1-202ENST00000348749 ESPNB1AK53 854 aa13.16□□□□□ -0.3
CHRNA1-202ENST00000348749 AAMPQ13685 434 aa13.16□□□□□ -0.3
CHRNA1-202ENST00000348749 TBC1D32Q96NH3 1257 aa13.16□□□□□ -0.3
CHRNA1-202ENST00000348749 PDCL3Q9H2J4 239 aa13.16□□□□□ -0.3
CHRNA1-202ENST00000348749 UHRF1BP1LA0JNW5 1464 aa13.15□□□□□ -0.3
CHRNA1-202ENST00000348749 E9PSI1 815 aa13.15□□□□□ -0.3
CHRNA1-202ENST00000348749 EFCAB2Q5VUJ9 269 aa13.15□□□□□ -0.3
CHRNA1-202ENST00000348749 TBC1D2Q9BYX2 928 aa13.15□□□□□ -0.3
CHRNA1-202ENST00000348749 CGNL1Q0VF96 1302 aa13.14□□□□□ -0.31
CHRNA1-202ENST00000348749 CLTCL1P53675 1640 aa13.14□□□□□ -0.31
CHRNA1-202ENST00000348749 IGHDP01880 384 aa13.14□□□□□ -0.31
CHRNA1-202ENST00000348749 UPF2Q9HAU5 1272 aaKnown RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms