RNA–Protein interactions for RNA: ENST00000347691.9

TRAPPC6B-202, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC6B, Length 3,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-202ENST00000347691 DUSP27Q5VZP5 1158 aa13.18□□□□□ -0.3
TRAPPC6B-202ENST00000347691 ASXL1Q8IXJ9 1541 aa13.18□□□□□ -0.3
TRAPPC6B-202ENST00000347691 ZNF521Q96K83 1311 aa13.17□□□□□ -0.3
TRAPPC6B-202ENST00000347691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.17□□□□□ -0.3
TRAPPC6B-202ENST00000347691 MADDQ8WXG6 1647 aa13.17□□□□□ -0.3
TRAPPC6B-202ENST00000347691 ABCC2Q92887 1545 aa13.17□□□□□ -0.3
TRAPPC6B-202ENST00000347691 GSE1Q14687 1217 aa13.17□□□□□ -0.3
TRAPPC6B-202ENST00000347691 SCAPERQ9BY12 1400 aa13.16□□□□□ -0.3
TRAPPC6B-202ENST00000347691 TTC37Q6PGP7 1564 aa13.16□□□□□ -0.3
TRAPPC6B-202ENST00000347691 SCAF11Q99590 1463 aaKnown RBP13.15□□□□□ -0.3
TRAPPC6B-202ENST00000347691 NINLQ9Y2I6 1382 aa13.15□□□□□ -0.3
TRAPPC6B-202ENST00000347691 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAPPC6B-202ENST00000347691 SPHKAPQ2M3C7 1700 aa13.15□□□□□ -0.3
TRAPPC6B-202ENST00000347691 PLEKHH1Q9ULM0 1364 aa13.14□□□□□ -0.31
TRAPPC6B-202ENST00000347691 NFKBIBQ15653 356 aa13.14□□□□□ -0.31
TRAPPC6B-202ENST00000347691 SLFN5Q08AF3 891 aa13.13□□□□□ -0.31
TRAPPC6B-202ENST00000347691 AMER1Q5JTC6 1135 aaPredicted RBP13.13□□□□□ -0.31
TRAPPC6B-202ENST00000347691 NKTRP30414 1462 aaKnown RBP13.13□□□□□ -0.31
TRAPPC6B-202ENST00000347691 KIAA1210Q9ULL0 1709 aa13.13□□□□□ -0.31
TRAPPC6B-202ENST00000347691 C20orf194Q5TEA3 1177 aa13.13□□□□□ -0.31
TRAPPC6B-202ENST00000347691 CEP152O94986 1710 aa13.13□□□□□ -0.31
TRAPPC6B-202ENST00000347691 TRPM2O94759 1503 aa13.13□□□□□ -0.31
TRAPPC6B-202ENST00000347691 VIRMAQ69YN4 1812 aaKnown RBP13.12□□□□□ -0.31
TRAPPC6B-202ENST00000347691 KDM5AP29375 1690 aaKnown RBP13.12□□□□□ -0.31
TRAPPC6B-202ENST00000347691 C8orf34Q49A92 452 aa13.12□□□□□ -0.31
TRAPPC6B-202ENST00000347691 TRMT2AQ8IZ69 625 aaKnown RBP13.11□□□□□ -0.31
TRAPPC6B-202ENST00000347691 E9PSI1 815 aa13.11□□□□□ -0.31
TRAPPC6B-202ENST00000347691 IL27Q8NEV9 243 aa13.11□□□□□ -0.31
TRAPPC6B-202ENST00000347691 NEURL4Q96JN8 1562 aa13.11□□□□□ -0.31
TRAPPC6B-202ENST00000347691 CGNL1Q0VF96 1302 aa13.1□□□□□ -0.31
TRAPPC6B-202ENST00000347691 AAMPQ13685 434 aa13.1□□□□□ -0.31
TRAPPC6B-202ENST00000347691 SHROOM2Q13796 1616 aa13.09□□□□□ -0.31
TRAPPC6B-202ENST00000347691 MYOM1P52179 1685 aa13.09□□□□□ -0.31
TRAPPC6B-202ENST00000347691 MAPK8IP3Q9UPT6 1336 aa13.09□□□□□ -0.31
TRAPPC6B-202ENST00000347691 PDE3AQ14432 1141 aa13.08□□□□□ -0.32
TRAPPC6B-202ENST00000347691 PLCH2O75038 1416 aa13.08□□□□□ -0.32
TRAPPC6B-202ENST00000347691 EFCAB2Q5VUJ9 269 aa13.07□□□□□ -0.32
TRAPPC6B-202ENST00000347691 PTPRTO14522 1441 aa13.07□□□□□ -0.32
TRAPPC6B-202ENST00000347691 RTEL1-TNFRSF6BF6WH68 1400 aa13.07□□□□□ -0.32
TRAPPC6B-202ENST00000347691 DNAJC5Q9H3Z4 198 aa13.07□□□□□ -0.32
TRAPPC6B-202ENST00000347691 ABCC1P33527 1531 aa13.07□□□□□ -0.32
TRAPPC6B-202ENST00000347691 ZMYM3Q14202 1370 aa13.06□□□□□ -0.32
TRAPPC6B-202ENST00000347691 BECN1Q14457 450 aa13.06□□□□□ -0.32
TRAPPC6B-202ENST00000347691 TET3O43151 1660 aa13.06□□□□□ -0.32
TRAPPC6B-202ENST00000347691 RGS3P49796 1198 aa13.05□□□□□ -0.32
TRAPPC6B-202ENST00000347691 SKAP1Q86WV1 359 aa13.05□□□□□ -0.32
TRAPPC6B-202ENST00000347691 DEPDC5O75140 1603 aa13.04□□□□□ -0.32
TRAPPC6B-202ENST00000347691 KANK1Q14678 1352 aa13.04□□□□□ -0.32
TRAPPC6B-202ENST00000347691 ARAP3Q8WWN8 1544 aa13.04□□□□□ -0.32
TRAPPC6B-202ENST00000347691 FRAT1Q92837 279 aaPredicted RBP13.03□□□□□ -0.32
TRAPPC6B-202ENST00000347691 CLTCL1P53675 1640 aa13.03□□□□□ -0.32
TRAPPC6B-202ENST00000347691 APAF1O14727 1248 aa13.03□□□□□ -0.32
TRAPPC6B-202ENST00000347691 MYOM2P54296 1465 aa13.02□□□□□ -0.32
TRAPPC6B-202ENST00000347691 CENPJQ9HC77 1338 aaPredicted RBP13.02□□□□□ -0.32
TRAPPC6B-202ENST00000347691 SLC4A3P48751 1232 aa13.02□□□□□ -0.33
TRAPPC6B-202ENST00000347691 POLR3AO14802 1390 aaPredicted RBP13.02□□□□□ -0.33
TRAPPC6B-202ENST00000347691 CANXP27824 592 aaKnown RBP13.01□□□□□ -0.33
TRAPPC6B-202ENST00000347691 PMFBP1Q8TBY8 1022 aa13.01□□□□□ -0.33
TRAPPC6B-202ENST00000347691 CLUAP1Q96AJ1 413 aa13.01□□□□□ -0.33
TRAPPC6B-202ENST00000347691 UPF2Q9HAU5 1272 aaKnown RBP13.01□□□□□ -0.33
TRAPPC6B-202ENST00000347691 SPAG9O60271 1321 aaKnown RBP13.01□□□□□ -0.33
TRAPPC6B-202ENST00000347691 CCDC146Q8IYE0 955 aa13□□□□□ -0.33
TRAPPC6B-202ENST00000347691 RTN4Q9NQC3 1192 aaKnown RBP13□□□□□ -0.33
TRAPPC6B-202ENST00000347691 CHD1O14646 1710 aa13□□□□□ -0.33
TRAPPC6B-202ENST00000347691 SBNO2Q9Y2G9 1366 aa13□□□□□ -0.33
TRAPPC6B-202ENST00000347691 MAP3K4Q9Y6R4 1608 aa13□□□□□ -0.33
TRAPPC6B-202ENST00000347691 ZFYVE16Q7Z3T8 1539 aa12.99□□□□□ -0.33
TRAPPC6B-202ENST00000347691 MYO3AQ8NEV4 1616 aa12.99□□□□□ -0.33
TRAPPC6B-202ENST00000347691 ANO8Q9HCE9 1232 aaPredicted RBP12.99□□□□□ -0.33
TRAPPC6B-202ENST00000347691 UHRF1BP1LA0JNW5 1464 aa12.99□□□□□ -0.33
TRAPPC6B-202ENST00000347691 BRPF3Q9ULD4 1205 aa12.98□□□□□ -0.33
TRAPPC6B-202ENST00000347691 ERVK-7P63135 1459 aa12.98□□□□□ -0.33
TRAPPC6B-202ENST00000347691 VWDEQ8N2E2 1590 aa12.98□□□□□ -0.33
TRAPPC6B-202ENST00000347691 FRAT2O75474 233 aaPredicted RBP12.98□□□□□ -0.33
TRAPPC6B-202ENST00000347691 BCAR3O75815 825 aa12.98□□□□□ -0.33
TRAPPC6B-202ENST00000347691 TRAPPC8Q9Y2L5 1435 aa12.98□□□□□ -0.33
TRAPPC6B-202ENST00000347691 KIF1BO60333 1816 aa12.97□□□□□ -0.33
TRAPPC6B-202ENST00000347691 ZCCHC11Q5TAX3 1644 aaKnown RBP12.97□□□□□ -0.33
TRAPPC6B-202ENST00000347691 NCBP3Q53F19 620 aaKnown RBP12.97□□□□□ -0.33
TRAPPC6B-202ENST00000347691 ABCA6Q8N139 1617 aa12.96□□□□□ -0.33
TRAPPC6B-202ENST00000347691 FAM43AQ8N2R8 423 aa12.96□□□□□ -0.33
TRAPPC6B-202ENST00000347691 L1TD1Q5T7N2 865 aaKnown RBP12.96□□□□□ -0.34
TRAPPC6B-202ENST00000347691 SPINK5Q9NQ38 1064 aaPredicted RBP12.96□□□□□ -0.34
TRAPPC6B-202ENST00000347691 IGHDP01880 384 aa12.95□□□□□ -0.34
TRAPPC6B-202ENST00000347691 WWC1Q8IX03 1113 aa12.95□□□□□ -0.34
TRAPPC6B-202ENST00000347691 WDR63Q8IWG1 891 aa12.94□□□□□ -0.34
TRAPPC6B-202ENST00000347691 RUNDC1Q96C34 613 aa12.94□□□□□ -0.34
TRAPPC6B-202ENST00000347691 IFT172Q9UG01 1749 aa12.94□□□□□ -0.34
TRAPPC6B-202ENST00000347691 SETBP1Q9Y6X0 1596 aa12.94□□□□□ -0.34
TRAPPC6B-202ENST00000347691 USP19O94966 1318 aa12.94□□□□□ -0.34
TRAPPC6B-202ENST00000347691 INO80Q9ULG1 1556 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC6B-202ENST00000347691 USP32Q8NFA0 1604 aa12.93□□□□□ -0.34
TRAPPC6B-202ENST00000347691 ATP7AQ04656 1500 aa12.93□□□□□ -0.34
TRAPPC6B-202ENST00000347691 RWDD1Q9H446 243 aaPredicted RBP12.93□□□□□ -0.34
TRAPPC6B-202ENST00000347691 CCDC27Q2M243 656 aa12.92□□□□□ -0.34
TRAPPC6B-202ENST00000347691 COG6Q9Y2V7 657 aa12.92□□□□□ -0.34
TRAPPC6B-202ENST00000347691 SHPRHQ149N8 1683 aa12.92□□□□□ -0.34
TRAPPC6B-202ENST00000347691 NRXN1Q9ULB1 1477 aa12.92□□□□□ -0.34
TRAPPC6B-202ENST00000347691 CFAP53Q96M91 514 aa12.92□□□□□ -0.34
TRAPPC6B-202ENST00000347691 IQSEC2Q5JU85 1478 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms