RNA–Protein interactions for RNA: ENST00000344780.4

SNX21-202, Transcript of sorting nexin family member 21, humanhuman

TSL 2

Gene SNX21, Length 3,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-202ENST00000344780 MYO5CQ9NQX4 1742 aa17.42■□□□□ 0.38
SNX21-202ENST00000344780 DUOX2Q9NRD8 1548 aa17.42■□□□□ 0.38
SNX21-202ENST00000344780 COL17A1Q9UMD9 1497 aaPredicted RBP17.42■□□□□ 0.38
SNX21-202ENST00000344780 APAF1O14727 1248 aa17.41■□□□□ 0.38
SNX21-202ENST00000344780 CFAP65Q6ZU64 1925 aaKnown RBP17.41■□□□□ 0.38
SNX21-202ENST00000344780 GOLGA2Q08379 1002 aa17.41■□□□□ 0.38
SNX21-202ENST00000344780 KANK1Q14678 1352 aa17.41■□□□□ 0.38
SNX21-202ENST00000344780 DAXXQ9UER7 740 aaPredicted RBP17.41■□□□□ 0.38
SNX21-202ENST00000344780 TRPM1Q7Z4N2 1603 aa17.41■□□□□ 0.38
SNX21-202ENST00000344780 WASHC2CQ9Y4E1 1318 aa17.4■□□□□ 0.38
SNX21-202ENST00000344780 ZCCHC11Q5TAX3 1644 aaKnown RBP17.4■□□□□ 0.38
SNX21-202ENST00000344780 UGGT1Q9NYU2 1555 aa17.39■□□□□ 0.37
SNX21-202ENST00000344780 RAPGEF3O95398 923 aa17.39■□□□□ 0.37
SNX21-202ENST00000344780 GPRASP1Q5JY77 1395 aa17.39■□□□□ 0.37
SNX21-202ENST00000344780 CDCA8Q53HL2 280 aa17.38■□□□□ 0.37
SNX21-202ENST00000344780 RRP7AQ9Y3A4 280 aaKnown RBP17.38■□□□□ 0.37
SNX21-202ENST00000344780 FANCAO15360 1455 aa17.38■□□□□ 0.37
SNX21-202ENST00000344780 AMER1Q5JTC6 1135 aaPredicted RBP17.38■□□□□ 0.37
SNX21-202ENST00000344780 MAGI2Q86UL8 1455 aa17.38■□□□□ 0.37
SNX21-202ENST00000344780 PLEKHH1Q9ULM0 1364 aa17.37■□□□□ 0.37
SNX21-202ENST00000344780 STK26Q9P289 416 aa17.36■□□□□ 0.37
SNX21-202ENST00000344780 CANXP27824 592 aaKnown RBP17.36■□□□□ 0.37
SNX21-202ENST00000344780 DUSP27Q5VZP5 1158 aa17.36■□□□□ 0.37
SNX21-202ENST00000344780 SLC12A5Q9H2X9 1139 aa17.36■□□□□ 0.37
SNX21-202ENST00000344780 BCAR3O75815 825 aa17.34■□□□□ 0.37
SNX21-202ENST00000344780 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.34■□□□□ 0.37
SNX21-202ENST00000344780 SPINK5Q9NQ38 1064 aaPredicted RBP17.34■□□□□ 0.37
SNX21-202ENST00000344780 ATP10AO60312 1499 aa17.34■□□□□ 0.37
SNX21-202ENST00000344780 ADGRL1O94910 1474 aa17.34■□□□□ 0.37
SNX21-202ENST00000344780 MAST1Q9Y2H9 1570 aa17.34■□□□□ 0.37
SNX21-202ENST00000344780 CARD14Q9BXL6 1004 aa17.34■□□□□ 0.37
SNX21-202ENST00000344780 UNC13BO14795 1591 aa17.33■□□□□ 0.37
SNX21-202ENST00000344780 MS4A1P11836 297 aa17.33■□□□□ 0.37
SNX21-202ENST00000344780 ABCC1P33527 1531 aa17.33■□□□□ 0.36
SNX21-202ENST00000344780 E9PCH4 1651 aa17.32■□□□□ 0.36
SNX21-202ENST00000344780 FRAT1Q92837 279 aaPredicted RBP17.32■□□□□ 0.36
SNX21-202ENST00000344780 SHROOM2Q13796 1616 aa17.32■□□□□ 0.36
SNX21-202ENST00000344780 IQGAP3Q86VI3 1631 aa17.32■□□□□ 0.36
SNX21-202ENST00000344780 DMRT2Q9Y5R5 561 aa17.31■□□□□ 0.36
SNX21-202ENST00000344780 PODXL2Q9NZ53 605 aa17.31■□□□□ 0.36
SNX21-202ENST00000344780 PRDM15P57071 1507 aaPredicted RBP17.3■□□□□ 0.36
SNX21-202ENST00000344780 A0A0U1RQG5 324 aaPredicted RBP17.3■□□□□ 0.36
SNX21-202ENST00000344780 ASXL2Q76L83 1435 aa17.3■□□□□ 0.36
SNX21-202ENST00000344780 BLMP54132 1417 aaPredicted RBP17.29■□□□□ 0.36
SNX21-202ENST00000344780 ZMYND15Q9H091 742 aa17.29■□□□□ 0.36
SNX21-202ENST00000344780 WDR7Q9Y4E6 1490 aa17.29■□□□□ 0.36
SNX21-202ENST00000344780 MORC1Q86VD1 984 aa17.28■□□□□ 0.36
SNX21-202ENST00000344780 PLXNC1O60486 1568 aa17.28■□□□□ 0.36
SNX21-202ENST00000344780 SLFN5Q08AF3 891 aa17.27■□□□□ 0.36
SNX21-202ENST00000344780 SCAF11Q99590 1463 aaKnown RBP17.27■□□□□ 0.35
SNX21-202ENST00000344780 CENPQQ7L2Z9 268 aaPredicted RBP17.27■□□□□ 0.35
SNX21-202ENST00000344780 OSCARQ8IYS5 282 aa17.26■□□□□ 0.35
SNX21-202ENST00000344780 BCL2L13Q9BXK5 485 aa17.26■□□□□ 0.35
SNX21-202ENST00000344780 CABP2Q9NPB3 220 aa17.25■□□□□ 0.35
SNX21-202ENST00000344780 NOS1P29475 1434 aa17.25■□□□□ 0.35
SNX21-202ENST00000344780 COG6Q9Y2V7 657 aa17.25■□□□□ 0.35
SNX21-202ENST00000344780 CLTCL1P53675 1640 aa17.25■□□□□ 0.35
SNX21-202ENST00000344780 CENPJQ9HC77 1338 aaPredicted RBP17.24■□□□□ 0.35
SNX21-202ENST00000344780 ZFYVE16Q7Z3T8 1539 aa17.24■□□□□ 0.35
SNX21-202ENST00000344780 PANK1Q8TE04 598 aa17.24■□□□□ 0.35
SNX21-202ENST00000344780 DDRGK1Q96HY6 314 aa17.24■□□□□ 0.35
SNX21-202ENST00000344780 ATP7AQ04656 1500 aa17.24■□□□□ 0.35
SNX21-202ENST00000344780 ZMYM4Q5VZL5 1548 aa17.24■□□□□ 0.35
SNX21-202ENST00000344780 EIF3AQ14152 1382 aaKnown RBP17.23■□□□□ 0.35
SNX21-202ENST00000344780 EIF2AK4Q9P2K8 1649 aaKnown RBP17.23■□□□□ 0.35
SNX21-202ENST00000344780 MLECQ14165 292 aa17.23■□□□□ 0.35
SNX21-202ENST00000344780 CYB5RLQ6IPT4 315 aa17.23■□□□□ 0.35
SNX21-202ENST00000344780 CLASP1Q7Z460 1538 aa17.22■□□□□ 0.35
SNX21-202ENST00000344780 CLUAP1Q96AJ1 413 aa17.22■□□□□ 0.35
SNX21-202ENST00000344780 PPM1GO15355 546 aaPredicted RBP17.21■□□□□ 0.35
SNX21-202ENST00000344780 FAM161AQ3B820 660 aa17.21■□□□□ 0.35
SNX21-202ENST00000344780 RTEL1-TNFRSF6BF6WH68 1400 aa17.2■□□□□ 0.34
SNX21-202ENST00000344780 UHRF1BP1LA0JNW5 1464 aa17.2■□□□□ 0.34
SNX21-202ENST00000344780 E9PSI1 815 aa17.19■□□□□ 0.34
SNX21-202ENST00000344780 KDM2BQ8NHM5 1336 aa17.19■□□□□ 0.34
SNX21-202ENST00000344780 MTHFSP49914 203 aa17.19■□□□□ 0.34
SNX21-202ENST00000344780 SRPK2P78362 688 aaKnown RBP17.19■□□□□ 0.34
SNX21-202ENST00000344780 CD109Q6YHK3 1445 aa17.19■□□□□ 0.34
SNX21-202ENST00000344780 ASXL1Q8IXJ9 1541 aa17.18■□□□□ 0.34
SNX21-202ENST00000344780 MADDQ8WXG6 1647 aa17.18■□□□□ 0.34
SNX21-202ENST00000344780 ZNF521Q96K83 1311 aa17.18■□□□□ 0.34
SNX21-202ENST00000344780 PTPRTO14522 1441 aa17.18■□□□□ 0.34
SNX21-202ENST00000344780 IGHDP01880 384 aa17.18■□□□□ 0.34
SNX21-202ENST00000344780 GSE1Q14687 1217 aa17.18■□□□□ 0.34
SNX21-202ENST00000344780 STAG3Q9UJ98 1225 aa17.17■□□□□ 0.34
SNX21-202ENST00000344780 MINK1Q8N4C8 1332 aaPredicted RBP17.17■□□□□ 0.34
SNX21-202ENST00000344780 U2SURPO15042 1029 aaKnown RBP17.17■□□□□ 0.34
SNX21-202ENST00000344780 TRPM2O94759 1503 aa17.17■□□□□ 0.34
SNX21-202ENST00000344780 TNNQ9UQP3 1299 aa17.16■□□□□ 0.34
SNX21-202ENST00000344780 FBLN1P23142 703 aa17.16■□□□□ 0.34
SNX21-202ENST00000344780 NSD3Q9BZ95 1437 aa17.16■□□□□ 0.34
SNX21-202ENST00000344780 U2AF1L5P0DN76 240 aaPredicted RBP17.16■□□□□ 0.34
SNX21-202ENST00000344780 U2AF1Q01081 240 aaKnown RBP eCLIP17.16■□□□□ 0.34
SNX21-202ENST00000344780 C8orf34Q49A92 452 aa17.16■□□□□ 0.34
SNX21-202ENST00000344780 WWC1Q8IX03 1113 aa17.16■□□□□ 0.34
SNX21-202ENST00000344780 GGNBP2Q9H3C7 697 aa17.16■□□□□ 0.34
SNX21-202ENST00000344780 IDI1Q13907 227 aa17.15■□□□□ 0.34
SNX21-202ENST00000344780 FBXO31Q5XUX0 539 aaPredicted RBP17.15■□□□□ 0.34
SNX21-202ENST00000344780 PLPPR3Q6T4P5 718 aa17.15■□□□□ 0.34
SNX21-202ENST00000344780 NFKBIBQ15653 356 aa17.14■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms