RNA–Protein interactions for RNA: ENST00000344280.7

CCDC38-201, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-201ENST00000344280 RCAN3Q9UKA8 241 aa28.59■■■□□ 2.17
CCDC38-201ENST00000344280 PPRC1Q5VV67 1664 aaKnown RBP28.59■■■□□ 2.17
CCDC38-201ENST00000344280 ZNF518AQ6AHZ1 1483 aa28.59■■■□□ 2.17
CCDC38-201ENST00000344280 PDE3BQ13370 1112 aa28.58■■■□□ 2.17
CCDC38-201ENST00000344280 MAP3K4Q9Y6R4 1608 aa28.57■■■□□ 2.16
CCDC38-201ENST00000344280 SYNMO15061 1565 aa28.57■■■□□ 2.16
CCDC38-201ENST00000344280 NEURL4Q96JN8 1562 aa28.57■■■□□ 2.16
CCDC38-201ENST00000344280 PPP2R1AP30153 589 aa28.57■■■□□ 2.16
CCDC38-201ENST00000344280 ABCA6Q8N139 1617 aa28.56■■■□□ 2.16
CCDC38-201ENST00000344280 CDCA8Q53HL2 280 aa28.56■■■□□ 2.16
CCDC38-201ENST00000344280 ADAMTS8Q9UP79 889 aa28.56■■■□□ 2.16
CCDC38-201ENST00000344280 NPM1P06748 294 aaKnown RBP eCLIP28.55■■■□□ 2.16
CCDC38-201ENST00000344280 KIAA1210Q9ULL0 1709 aa28.55■■■□□ 2.16
CCDC38-201ENST00000344280 MYOM1P52179 1685 aa28.55■■■□□ 2.16
CCDC38-201ENST00000344280 EIF3AQ14152 1382 aaKnown RBP28.55■■■□□ 2.16
CCDC38-201ENST00000344280 MROH2AA6NES4 1674 aa28.54■■■□□ 2.16
CCDC38-201ENST00000344280 OSCARQ8IYS5 282 aa28.54■■■□□ 2.16
CCDC38-201ENST00000344280 INSRP06213 1382 aa28.54■■■□□ 2.16
CCDC38-201ENST00000344280 MYOM2P54296 1465 aa28.54■■■□□ 2.16
CCDC38-201ENST00000344280 KIF1BO60333 1816 aa28.53■■■□□ 2.16
CCDC38-201ENST00000344280 CD109Q6YHK3 1445 aa28.53■■■□□ 2.16
CCDC38-201ENST00000344280 ZMYM4Q5VZL5 1548 aa28.53■■■□□ 2.16
CCDC38-201ENST00000344280 EXOC6Q8TAG9 804 aa28.52■■■□□ 2.16
CCDC38-201ENST00000344280 LMTK2Q8IWU2 1503 aa28.5■■■□□ 2.15
CCDC38-201ENST00000344280 ASXL1Q8IXJ9 1541 aa28.49■■■□□ 2.15
CCDC38-201ENST00000344280 POGZQ7Z3K3 1410 aa28.49■■■□□ 2.15
CCDC38-201ENST00000344280 IFT172Q9UG01 1749 aa28.49■■■□□ 2.15
CCDC38-201ENST00000344280 FRMPD1Q5SYB0 1578 aa28.49■■■□□ 2.15
CCDC38-201ENST00000344280 GGT6Q6P531 493 aa28.48■■■□□ 2.15
CCDC38-201ENST00000344280 ERVK-7P63135 1459 aa28.48■■■□□ 2.15
CCDC38-201ENST00000344280 CFAP65Q6ZU64 1925 aaKnown RBP28.47■■■□□ 2.15
CCDC38-201ENST00000344280 CHGAP10645 457 aaKnown RBP28.47■■■□□ 2.15
CCDC38-201ENST00000344280 KDM5AP29375 1690 aaKnown RBP28.46■■■□□ 2.15
CCDC38-201ENST00000344280 NOS1P29475 1434 aa28.46■■■□□ 2.15
CCDC38-201ENST00000344280 NPATQ14207 1427 aa28.46■■■□□ 2.15
CCDC38-201ENST00000344280 NRXN1Q9ULB1 1477 aa28.45■■■□□ 2.15
CCDC38-201ENST00000344280 ADGRB3O60242 1522 aa28.43■■■□□ 2.14
CCDC38-201ENST00000344280 PLIN1O60240 522 aa28.43■■■□□ 2.14
CCDC38-201ENST00000344280 MLH3Q9UHC1 1453 aa28.42■■■□□ 2.14
CCDC38-201ENST00000344280 WDR43Q15061 677 aaKnown RBP eCLIP28.41■■■□□ 2.14
CCDC38-201ENST00000344280 PLEKHH1Q9ULM0 1364 aa28.41■■■□□ 2.14
CCDC38-201ENST00000344280 CARD14Q9BXL6 1004 aa28.4■■■□□ 2.14
CCDC38-201ENST00000344280 HECW2Q9P2P5 1572 aa28.39■■■□□ 2.14
CCDC38-201ENST00000344280 NPC1L1Q9UHC9 1359 aa28.39■■■□□ 2.14
CCDC38-201ENST00000344280 RAPGEF3O95398 923 aa28.39■■■□□ 2.13
CCDC38-201ENST00000344280 PIK3C2GO75747 1445 aa28.38■■■□□ 2.13
CCDC38-201ENST00000344280 CFAP74Q9C0B2 1584 aa28.38■■■□□ 2.13
CCDC38-201ENST00000344280 TRAK1Q9UPV9 953 aa28.35■■■□□ 2.13
CCDC38-201ENST00000344280 ABCC3O15438 1527 aa28.32■■■□□ 2.12
CCDC38-201ENST00000344280 MYO3AQ8NEV4 1616 aa28.32■■■□□ 2.12
CCDC38-201ENST00000344280 TMEM132EQ6IEE7 984 aa28.32■■■□□ 2.12
CCDC38-201ENST00000344280 ZNF521Q96K83 1311 aa28.32■■■□□ 2.12
CCDC38-201ENST00000344280 CENPJQ9HC77 1338 aaPredicted RBP28.32■■■□□ 2.12
CCDC38-201ENST00000344280 CCDC146Q8IYE0 955 aa28.31■■■□□ 2.12
CCDC38-201ENST00000344280 PPLO60437 1756 aa28.31■■■□□ 2.12
CCDC38-201ENST00000344280 SLC24A1O60721 1099 aa28.31■■■□□ 2.12
CCDC38-201ENST00000344280 C14orf93Q9H972 538 aaKnown RBP28.31■■■□□ 2.12
CCDC38-201ENST00000344280 DUSP27Q5VZP5 1158 aa28.3■■■□□ 2.12
CCDC38-201ENST00000344280 SBNO2Q9Y2G9 1366 aa28.3■■■□□ 2.12
CCDC38-201ENST00000344280 SETBP1Q9Y6X0 1596 aa28.29■■■□□ 2.12
CCDC38-201ENST00000344280 NUTM2DQ5VT03 806 aaPredicted RBP28.28■■■□□ 2.12
CCDC38-201ENST00000344280 ADGRB1O14514 1584 aa28.27■■■□□ 2.12
CCDC38-201ENST00000344280 CRBNQ96SW2 442 aa28.27■■■□□ 2.12
CCDC38-201ENST00000344280 SIGLEC1Q9BZZ2 1709 aa28.27■■■□□ 2.12
CCDC38-201ENST00000344280 C20orf194Q5TEA3 1177 aa28.26■■■□□ 2.11
CCDC38-201ENST00000344280 CAMSAP1Q5T5Y3 1602 aa28.24■■■□□ 2.11
CCDC38-201ENST00000344280 GOLGA2Q08379 1002 aa28.23■■■□□ 2.11
CCDC38-201ENST00000344280 NEO1Q92859 1461 aa28.23■■■□□ 2.11
CCDC38-201ENST00000344280 SLC12A5Q9H2X9 1139 aa28.22■■■□□ 2.11
CCDC38-201ENST00000344280 APAF1O14727 1248 aa28.22■■■□□ 2.11
CCDC38-201ENST00000344280 ERICH6Q7L0X2 663 aa28.21■■■□□ 2.11
CCDC38-201ENST00000344280 SPINK5Q9NQ38 1064 aaPredicted RBP28.21■■■□□ 2.11
CCDC38-201ENST00000344280 DIP2CQ9Y2E4 1556 aa28.21■■■□□ 2.11
CCDC38-201ENST00000344280 QRICH2Q9H0J4 1663 aa28.2■■■□□ 2.11
CCDC38-201ENST00000344280 ZC3H13Q5T200 1668 aaKnown RBP28.19■■■□□ 2.1
CCDC38-201ENST00000344280 RPGRIP1LQ68CZ1 1315 aa28.19■■■□□ 2.1
CCDC38-201ENST00000344280 NSD3Q9BZ95 1437 aa28.19■■■□□ 2.1
CCDC38-201ENST00000344280 SLFN5Q08AF3 891 aa28.18■■■□□ 2.1
CCDC38-201ENST00000344280 PIK3C2BO00750 1634 aa28.15■■■□□ 2.1
CCDC38-201ENST00000344280 YEATS2Q9ULM3 1422 aa28.15■■■□□ 2.1
CCDC38-201ENST00000344280 TNNT2P45379 298 aaPredicted RBP28.15■■■□□ 2.1
CCDC38-201ENST00000344280 SKAP1Q86WV1 359 aa28.15■■■□□ 2.1
CCDC38-201ENST00000344280 SENP3Q9H4L4 574 aaPredicted RBP28.15■■■□□ 2.1
CCDC38-201ENST00000344280 TRMT2AQ8IZ69 625 aaKnown RBP28.13■■■□□ 2.09
CCDC38-201ENST00000344280 DMRT2Q9Y5R5 561 aa28.13■■■□□ 2.09
CCDC38-201ENST00000344280 IDI1Q13907 227 aa28.13■■■□□ 2.09
CCDC38-201ENST00000344280 NEXMIFQ5QGS0 1516 aa28.13■■■□□ 2.09
CCDC38-201ENST00000344280 RICTORQ6R327 1708 aa28.12■■■□□ 2.09
CCDC38-201ENST00000344280 GLI2P10070 1586 aa28.12■■■□□ 2.09
CCDC38-201ENST00000344280 TCERG1O14776 1098 aaKnown RBP28.11■■■□□ 2.09
CCDC38-201ENST00000344280 MORC1Q86VD1 984 aa28.11■■■□□ 2.09
CCDC38-201ENST00000344280 PAK3O75914 559 aaPredicted RBP28.1■■■□□ 2.09
CCDC38-201ENST00000344280 POLR3AO14802 1390 aaPredicted RBP28.1■■■□□ 2.09
CCDC38-201ENST00000344280 VGFO15240 615 aaPredicted RBP28.09■■■□□ 2.09
CCDC38-201ENST00000344280 NOP58Q9Y2X3 529 aaKnown RBP28.07■■■□□ 2.08
CCDC38-201ENST00000344280 ARHGAP31Q2M1Z3 1444 aa28.07■■■□□ 2.08
CCDC38-201ENST00000344280 ANP32AP39687 249 aaKnown RBP28.06■■■□□ 2.08
CCDC38-201ENST00000344280 SAFB2Q14151 953 aaKnown RBP eCLIP28.06■■■□□ 2.08
CCDC38-201ENST00000344280 TULP4Q9NRJ4 1543 aa28.05■■■□□ 2.08
CCDC38-201ENST00000344280 ARHGEF28Q8N1W1 1705 aaKnown RBP28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 372.7 ms