RNA–Protein interactions for RNA: ENST00000343258.8

VAV3-201, Transcript of vav guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best)

Gene VAV3, Length 2,552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV3-201ENST00000343258 NUTM2DQ5VT03 806 aaPredicted RBP6.79□□□□□ -1.32
VAV3-201ENST00000343258 ANKLE2Q86XL3 938 aa6.79□□□□□ -1.32
VAV3-201ENST00000343258 PTPRTO14522 1441 aa6.79□□□□□ -1.32
VAV3-201ENST00000343258 PIK3C2BO00750 1634 aa6.79□□□□□ -1.32
VAV3-201ENST00000343258 E9PCH4 1651 aa6.78□□□□□ -1.32
VAV3-201ENST00000343258 CHGAP10645 457 aaKnown RBP6.78□□□□□ -1.32
VAV3-201ENST00000343258 STAG3Q9UJ98 1225 aa6.78□□□□□ -1.32
VAV3-201ENST00000343258 IQGAP3Q86VI3 1631 aa6.78□□□□□ -1.32
VAV3-201ENST00000343258 TET3O43151 1660 aa6.78□□□□□ -1.32
VAV3-201ENST00000343258 TXNDC2Q86VQ3 553 aa6.78□□□□□ -1.32
VAV3-201ENST00000343258 CERKQ8TCT0 537 aa6.78□□□□□ -1.32
VAV3-201ENST00000343258 RNF39Q9H2S5 420 aa6.78□□□□□ -1.32
VAV3-201ENST00000343258 UBR1Q8IWV7 1749 aa6.77□□□□□ -1.32
VAV3-201ENST00000343258 TMEM2Q9UHN6 1383 aa6.77□□□□□ -1.33
VAV3-201ENST00000343258 GCC2Q8IWJ2 1684 aa6.77□□□□□ -1.33
VAV3-201ENST00000343258 SLC52A1Q9NWF4 448 aa6.77□□□□□ -1.33
VAV3-201ENST00000343258 U3KPZ7 1027 aaPredicted RBP6.77□□□□□ -1.33
VAV3-201ENST00000343258 RPRD2Q5VT52 1461 aaKnown RBP6.77□□□□□ -1.33
VAV3-201ENST00000343258 NPHP4O75161 1426 aaPredicted RBP6.76□□□□□ -1.33
VAV3-201ENST00000343258 LTBP4Q8N2S1 1624 aa6.76□□□□□ -1.33
VAV3-201ENST00000343258 ARHGAP23Q9P227 1491 aa6.76□□□□□ -1.33
VAV3-201ENST00000343258 SLC26A8Q96RN1 970 aa6.76□□□□□ -1.33
VAV3-201ENST00000343258 SCAF11Q99590 1463 aaKnown RBP6.75□□□□□ -1.33
VAV3-201ENST00000343258 RAB3GAP2Q9H2M9 1393 aa6.75□□□□□ -1.33
VAV3-201ENST00000343258 SLIT1O75093 1534 aa6.75□□□□□ -1.33
VAV3-201ENST00000343258 SETD5Q9C0A6 1442 aa6.75□□□□□ -1.33
VAV3-201ENST00000343258 MED14O60244 1454 aa6.75□□□□□ -1.33
VAV3-201ENST00000343258 RBM33Q96EV2 1170 aaKnown RBP6.74□□□□□ -1.33
VAV3-201ENST00000343258 MPHOSPH9Q99550 1183 aa6.74□□□□□ -1.33
VAV3-201ENST00000343258 ADGRB3O60242 1522 aa6.74□□□□□ -1.33
VAV3-201ENST00000343258 ATF5Q9Y2D1 282 aaPredicted RBP6.74□□□□□ -1.33
VAV3-201ENST00000343258 EID1Q9Y6B2 187 aa6.74□□□□□ -1.33
VAV3-201ENST00000343258 ZFYVE9O95405 1425 aa6.74□□□□□ -1.33
VAV3-201ENST00000343258 POLR1AO95602 1720 aaPredicted RBP6.73□□□□□ -1.33
VAV3-201ENST00000343258 FBXO41Q8TF61 875 aa6.73□□□□□ -1.33
VAV3-201ENST00000343258 RIMS2Q9UQ26 1411 aa6.73□□□□□ -1.33
VAV3-201ENST00000343258 TMEM131LA2VDJ0 1609 aa6.73□□□□□ -1.33
VAV3-201ENST00000343258 MYO5BQ9ULV0 1848 aa6.73□□□□□ -1.33
VAV3-201ENST00000343258 BCANQ96GW7 911 aa6.72□□□□□ -1.33
VAV3-201ENST00000343258 IQGAP1P46940 1657 aa6.72□□□□□ -1.33
VAV3-201ENST00000343258 CLTCL1P53675 1640 aa6.72□□□□□ -1.33
VAV3-201ENST00000343258 PPP1R15AO75807 674 aaPredicted RBP6.72□□□□□ -1.33
VAV3-201ENST00000343258 MYCNP04198 464 aaPredicted RBP6.72□□□□□ -1.33
VAV3-201ENST00000343258 ZNF326Q5BKZ1 582 aaKnown RBP6.72□□□□□ -1.33
VAV3-201ENST00000343258 STRCP1A6NGW2 1772 aa6.71□□□□□ -1.34
VAV3-201ENST00000343258 SPHKAPQ2M3C7 1700 aa6.71□□□□□ -1.34
VAV3-201ENST00000343258 TRPM2O94759 1503 aa6.71□□□□□ -1.34
VAV3-201ENST00000343258 RGL3Q3MIN7 710 aa6.7□□□□□ -1.34
VAV3-201ENST00000343258 ANO8Q9HCE9 1232 aaPredicted RBP6.7□□□□□ -1.34
VAV3-201ENST00000343258 UBAP1LF5GYI3 381 aa6.69□□□□□ -1.34
VAV3-201ENST00000343258 TRIM26Q12899 539 aaPredicted RBP6.69□□□□□ -1.34
VAV3-201ENST00000343258 PLEKHG1Q9ULL1 1385 aa6.69□□□□□ -1.34
VAV3-201ENST00000343258 ADAMTS13Q76LX8 1427 aa6.69□□□□□ -1.34
VAV3-201ENST00000343258 KDM5AP29375 1690 aaKnown RBP6.69□□□□□ -1.34
VAV3-201ENST00000343258 LRRC7Q96NW7 1537 aa6.69□□□□□ -1.34
VAV3-201ENST00000343258 EIF5BO60841 1220 aaKnown RBP6.69□□□□□ -1.34
VAV3-201ENST00000343258 KCNA6P17658 529 aa6.68□□□□□ -1.34
VAV3-201ENST00000343258 PIP4K2BP78356 416 aa6.68□□□□□ -1.34
VAV3-201ENST00000343258 METP08581 1390 aa6.68□□□□□ -1.34
VAV3-201ENST00000343258 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.67□□□□□ -1.34
VAV3-201ENST00000343258 NEXMIFQ5QGS0 1516 aa6.67□□□□□ -1.34
VAV3-201ENST00000343258 CCDC144AA2RUR9 1427 aa6.67□□□□□ -1.34
VAV3-201ENST00000343258 PTPRUQ92729 1446 aa6.67□□□□□ -1.34
VAV3-201ENST00000343258 TMEM94Q12767 1356 aa6.67□□□□□ -1.34
VAV3-201ENST00000343258 ADGRF5Q8IZF2 1346 aa6.67□□□□□ -1.34
VAV3-201ENST00000343258 TBX22Q9Y458 520 aa6.67□□□□□ -1.34
VAV3-201ENST00000343258 SPATA31E1Q6ZUB1 1445 aa6.67□□□□□ -1.34
VAV3-201ENST00000343258 ALKQ9UM73 1620 aa6.67□□□□□ -1.34
VAV3-201ENST00000343258 CPS1P31327 1500 aa6.66□□□□□ -1.34
VAV3-201ENST00000343258 PROSER2Q86WR7 435 aaPredicted RBP6.66□□□□□ -1.34
VAV3-201ENST00000343258 ANKRD30BQ9BXX2 1392 aa6.66□□□□□ -1.34
VAV3-201ENST00000343258 HDGFP51858 240 aaKnown RBP6.66□□□□□ -1.34
VAV3-201ENST00000343258 NRXN3Q9Y4C0 1643 aa6.66□□□□□ -1.34
VAV3-201ENST00000343258 AMOTL2Q9Y2J4 779 aa6.65□□□□□ -1.34
VAV3-201ENST00000343258 DAXXQ9UER7 740 aaPredicted RBP6.64□□□□□ -1.35
VAV3-201ENST00000343258 IQSEC2Q5JU85 1478 aa6.64□□□□□ -1.35
VAV3-201ENST00000343258 VGFO15240 615 aaPredicted RBP6.63□□□□□ -1.35
VAV3-201ENST00000343258 HSPA1LP34931 641 aa6.63□□□□□ -1.35
VAV3-201ENST00000343258 TMEM132EQ6IEE7 984 aa6.63□□□□□ -1.35
VAV3-201ENST00000343258 KIF1BO60333 1816 aa6.63□□□□□ -1.35
VAV3-201ENST00000343258 XIRP1Q702N8 1843 aaKnown RBP6.63□□□□□ -1.35
VAV3-201ENST00000343258 SETBP1Q9Y6X0 1596 aa6.63□□□□□ -1.35
VAV3-201ENST00000343258 NWD1Q149M9 1564 aa6.63□□□□□ -1.35
VAV3-201ENST00000343258 TOM1O60784 492 aa6.63□□□□□ -1.35
VAV3-201ENST00000343258 SIN3AQ96ST3 1273 aa6.63□□□□□ -1.35
VAV3-201ENST00000343258 KDM2AQ9Y2K7 1162 aa6.63□□□□□ -1.35
VAV3-201ENST00000343258 RPGRIP1LQ68CZ1 1315 aa6.62□□□□□ -1.35
VAV3-201ENST00000343258 DIEXFQ68CQ4 756 aaKnown RBP6.62□□□□□ -1.35
VAV3-201ENST00000343258 SPINK5Q9NQ38 1064 aaPredicted RBP6.62□□□□□ -1.35
VAV3-201ENST00000343258 STK26Q9P289 416 aa6.62□□□□□ -1.35
VAV3-201ENST00000343258 CHD2O14647 1828 aaKnown RBP6.62□□□□□ -1.35
VAV3-201ENST00000343258 ROBO2Q9HCK4 1378 aa6.62□□□□□ -1.35
VAV3-201ENST00000343258 CFAP70Q5T0N1 1121 aa6.62□□□□□ -1.35
VAV3-201ENST00000343258 C14orf37Q86TY3 774 aa6.62□□□□□ -1.35
VAV3-201ENST00000343258 NKTRP30414 1462 aaKnown RBP6.61□□□□□ -1.35
VAV3-201ENST00000343258 PPLO60437 1756 aa6.61□□□□□ -1.35
VAV3-201ENST00000343258 DHX57Q6P158 1386 aaKnown RBP6.61□□□□□ -1.35
VAV3-201ENST00000343258 DCAF11Q8TEB1 546 aa6.61□□□□□ -1.35
VAV3-201ENST00000343258 UBE2Q2Q8WVN8 375 aa6.61□□□□□ -1.35
VAV3-201ENST00000343258 YTHDC1Q96MU7 727 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms