RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 PRAG1Q86YV5 1406 aa19.55■□□□□ 0.72
SNX18-202ENST00000343017 GLIPR1L2Q4G1C9 344 aa19.54■□□□□ 0.72
SNX18-202ENST00000343017 TMF1P82094 1093 aa19.54■□□□□ 0.72
SNX18-202ENST00000343017 KNSTRNQ9Y448 316 aa19.54■□□□□ 0.72
SNX18-202ENST00000343017 ADGRL2O95490 1459 aa19.53■□□□□ 0.72
SNX18-202ENST00000343017 COL17A1Q9UMD9 1497 aaPredicted RBP19.52■□□□□ 0.72
SNX18-202ENST00000343017 ERBINQ96RT1 1412 aa19.52■□□□□ 0.72
SNX18-202ENST00000343017 HSP90AA1P07900 732 aaKnown RBP19.52■□□□□ 0.72
SNX18-202ENST00000343017 INSRP06213 1382 aa19.52■□□□□ 0.72
SNX18-202ENST00000343017 CANXP27824 592 aaKnown RBP19.52■□□□□ 0.72
SNX18-202ENST00000343017 EIF3AQ14152 1382 aaKnown RBP19.51■□□□□ 0.71
SNX18-202ENST00000343017 ABCA8O94911 1581 aa19.51■□□□□ 0.71
SNX18-202ENST00000343017 CLCN1P35523 988 aa19.51■□□□□ 0.71
SNX18-202ENST00000343017 CLUAP1Q96AJ1 413 aa19.51■□□□□ 0.71
SNX18-202ENST00000343017 ADGBQ8N7X0 1667 aa19.5■□□□□ 0.71
SNX18-202ENST00000343017 FSD2A1L4K1 749 aa19.5■□□□□ 0.71
SNX18-202ENST00000343017 MCM4P33991 863 aa19.5■□□□□ 0.71
SNX18-202ENST00000343017 TRMT2AQ8IZ69 625 aaKnown RBP19.5■□□□□ 0.71
SNX18-202ENST00000343017 TNNQ9UQP3 1299 aa19.5■□□□□ 0.71
SNX18-202ENST00000343017 NLRP1Q9C000 1473 aa19.49■□□□□ 0.71
SNX18-202ENST00000343017 KDM5DQ9BY66 1539 aa19.48■□□□□ 0.71
SNX18-202ENST00000343017 C9orf84Q5VXU9 1444 aa19.48■□□□□ 0.71
SNX18-202ENST00000343017 AMER1Q5JTC6 1135 aaPredicted RBP19.47■□□□□ 0.71
SNX18-202ENST00000343017 TBC1D32Q96NH3 1257 aa19.47■□□□□ 0.71
SNX18-202ENST00000343017 MAGI2Q86UL8 1455 aa19.47■□□□□ 0.71
SNX18-202ENST00000343017 TRAK2O60296 914 aa19.47■□□□□ 0.71
SNX18-202ENST00000343017 MAPK8IP3Q9UPT6 1336 aa19.47■□□□□ 0.71
SNX18-202ENST00000343017 PCDHB15Q9Y5E8 787 aa19.46■□□□□ 0.71
SNX18-202ENST00000343017 CCDC144AA2RUR9 1427 aa19.46■□□□□ 0.71
SNX18-202ENST00000343017 UPF2Q9HAU5 1272 aaKnown RBP19.46■□□□□ 0.71
SNX18-202ENST00000343017 TRPM1Q7Z4N2 1603 aa19.46■□□□□ 0.71
SNX18-202ENST00000343017 ERBB4Q15303 1308 aa19.45■□□□□ 0.7
SNX18-202ENST00000343017 NEUROD2Q15784 382 aa19.45■□□□□ 0.7
SNX18-202ENST00000343017 NKTRP30414 1462 aaKnown RBP19.45■□□□□ 0.7
SNX18-202ENST00000343017 BCL2L13Q9BXK5 485 aa19.45■□□□□ 0.7
SNX18-202ENST00000343017 PDZRN3Q9UPQ7 1066 aa19.44■□□□□ 0.7
SNX18-202ENST00000343017 CGNL1Q0VF96 1302 aa19.43■□□□□ 0.7
SNX18-202ENST00000343017 A2MP01023 1474 aa19.42■□□□□ 0.7
SNX18-202ENST00000343017 CENPJQ9HC77 1338 aaPredicted RBP19.42■□□□□ 0.7
SNX18-202ENST00000343017 E9PSI1 815 aa19.42■□□□□ 0.7
SNX18-202ENST00000343017 RLBP1P12271 317 aa19.42■□□□□ 0.7
SNX18-202ENST00000343017 GPRASP1Q5JY77 1395 aa19.42■□□□□ 0.7
SNX18-202ENST00000343017 RRP9O43818 475 aaKnown RBP19.41■□□□□ 0.7
SNX18-202ENST00000343017 PDE3AQ14432 1141 aa19.4■□□□□ 0.7
SNX18-202ENST00000343017 CROCC2H7BZ55 1655 aa19.4■□□□□ 0.7
SNX18-202ENST00000343017 ABCC10Q5T3U5 1492 aa19.4■□□□□ 0.7
SNX18-202ENST00000343017 MYH16Q9H6N6 1097 aa19.4■□□□□ 0.7
SNX18-202ENST00000343017 RRP7AQ9Y3A4 280 aaKnown RBP19.4■□□□□ 0.7
SNX18-202ENST00000343017 MFAP1P55081 439 aaKnown RBP19.39■□□□□ 0.69
SNX18-202ENST00000343017 ESPNB1AK53 854 aa19.39■□□□□ 0.69
SNX18-202ENST00000343017 GRPEL1Q9HAV7 217 aa19.39■□□□□ 0.69
SNX18-202ENST00000343017 WDR7Q9Y4E6 1490 aa19.38■□□□□ 0.69
SNX18-202ENST00000343017 ARHGAP5Q13017 1502 aa19.38■□□□□ 0.69
SNX18-202ENST00000343017 PLA2R1Q13018 1463 aa19.38■□□□□ 0.69
SNX18-202ENST00000343017 MRE11P49959 708 aa19.37■□□□□ 0.69
SNX18-202ENST00000343017 VIRMAQ69YN4 1812 aaKnown RBP19.36■□□□□ 0.69
SNX18-202ENST00000343017 CHMP5Q9NZZ3 219 aa19.36■□□□□ 0.69
SNX18-202ENST00000343017 ITSN2Q9NZM3 1697 aa19.36■□□□□ 0.69
SNX18-202ENST00000343017 PRDM15P57071 1507 aaPredicted RBP19.35■□□□□ 0.69
SNX18-202ENST00000343017 AFAP1Q8N556 730 aa19.35■□□□□ 0.69
SNX18-202ENST00000343017 FAM135AQ9P2D6 1515 aa19.35■□□□□ 0.69
SNX18-202ENST00000343017 GAS2L3Q86XJ1 694 aa19.35■□□□□ 0.69
SNX18-202ENST00000343017 C22orf23Q9BZE7 217 aa19.34■□□□□ 0.69
SNX18-202ENST00000343017 WWC1Q8IX03 1113 aa19.34■□□□□ 0.69
SNX18-202ENST00000343017 CDC42BPAQ5VT25 1732 aa19.33■□□□□ 0.69
SNX18-202ENST00000343017 EFCAB2Q5VUJ9 269 aa19.33■□□□□ 0.69
SNX18-202ENST00000343017 OSCARQ8IYS5 282 aa19.33■□□□□ 0.68
SNX18-202ENST00000343017 PMFBP1Q8TBY8 1022 aa19.33■□□□□ 0.68
SNX18-202ENST00000343017 RARSP54136 660 aaKnown RBP19.31■□□□□ 0.68
SNX18-202ENST00000343017 TNNT2P45379 298 aaPredicted RBP19.3■□□□□ 0.68
SNX18-202ENST00000343017 TRIM44Q96DX7 344 aaPredicted RBP19.3■□□□□ 0.68
SNX18-202ENST00000343017 ABCC2Q92887 1545 aa19.3■□□□□ 0.68
SNX18-202ENST00000343017 SYCP2Q9BX26 1530 aa19.29■□□□□ 0.68
SNX18-202ENST00000343017 ADCY10Q96PN6 1610 aa19.28■□□□□ 0.68
SNX18-202ENST00000343017 NPM1P06748 294 aaKnown RBP eCLIP19.28■□□□□ 0.68
SNX18-202ENST00000343017 FOXD4L1Q9NU39 408 aa19.28■□□□□ 0.68
SNX18-202ENST00000343017 TTC37Q6PGP7 1564 aa19.28■□□□□ 0.68
SNX18-202ENST00000343017 ZNF692Q9BU19 519 aaPredicted RBP19.27■□□□□ 0.68
SNX18-202ENST00000343017 RWDD1Q9H446 243 aaPredicted RBP19.27■□□□□ 0.67
SNX18-202ENST00000343017 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.26■□□□□ 0.67
SNX18-202ENST00000343017 PIK3C2GO75747 1445 aa19.26■□□□□ 0.67
SNX18-202ENST00000343017 CCDC141Q6ZP82 1450 aa19.26■□□□□ 0.67
SNX18-202ENST00000343017 CLASP1Q7Z460 1538 aa19.25■□□□□ 0.67
SNX18-202ENST00000343017 SHANK2Q9UPX8 1470 aa19.25■□□□□ 0.67
SNX18-202ENST00000343017 TNPO1Q92973 898 aaKnown RBP19.25■□□□□ 0.67
SNX18-202ENST00000343017 ASXL1Q8IXJ9 1541 aa19.24■□□□□ 0.67
SNX18-202ENST00000343017 HSCBQ8IWL3 235 aa19.24■□□□□ 0.67
SNX18-202ENST00000343017 SHROOM2Q13796 1616 aa19.24■□□□□ 0.67
SNX18-202ENST00000343017 SAMD9LQ8IVG5 1584 aa19.24■□□□□ 0.67
SNX18-202ENST00000343017 CARD14Q9BXL6 1004 aa19.24■□□□□ 0.67
SNX18-202ENST00000343017 RSPH4AQ5TD94 716 aa19.23■□□□□ 0.67
SNX18-202ENST00000343017 RBM10P98175 930 aaKnown RBP19.23■□□□□ 0.67
SNX18-202ENST00000343017 RTEL1-TNFRSF6BF6WH68 1400 aa19.23■□□□□ 0.67
SNX18-202ENST00000343017 DDX11L8A8MPP1 907 aa19.23■□□□□ 0.67
SNX18-202ENST00000343017 KIAA1211Q6ZU35 1233 aa19.23■□□□□ 0.67
SNX18-202ENST00000343017 SPAG9O60271 1321 aaKnown RBP19.22■□□□□ 0.67
SNX18-202ENST00000343017 TCP11L2Q8N4U5 519 aa19.2■□□□□ 0.66
SNX18-202ENST00000343017 CDC42BPBQ9Y5S2 1711 aa19.2■□□□□ 0.66
SNX18-202ENST00000343017 CDCA8Q53HL2 280 aa19.19■□□□□ 0.66
SNX18-202ENST00000343017 TRAPPC8Q9Y2L5 1435 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms