RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 IFIT2P09913 472 aaKnown RBP18.46■□□□□ 0.55
UBE3B-202ENST00000342494 TPD52L1Q16890 204 aaPredicted RBP18.46■□□□□ 0.55
UBE3B-202ENST00000342494 TPM3P06753 285 aa18.46■□□□□ 0.55
UBE3B-202ENST00000342494 A0A0U1RQG5 324 aaPredicted RBP18.46■□□□□ 0.55
UBE3B-202ENST00000342494 RIPK4P57078 832 aa18.46■□□□□ 0.55
UBE3B-202ENST00000342494 DHX16O60231 1041 aaKnown RBP18.45■□□□□ 0.54
UBE3B-202ENST00000342494 RUFY2Q8WXA3 655 aa18.45■□□□□ 0.54
UBE3B-202ENST00000342494 FKBP5Q13451 457 aaPredicted RBP18.45■□□□□ 0.54
UBE3B-202ENST00000342494 APAF1O14727 1248 aa18.45■□□□□ 0.54
UBE3B-202ENST00000342494 DHX57Q6P158 1386 aaKnown RBP18.45■□□□□ 0.54
UBE3B-202ENST00000342494 RBM33Q96EV2 1170 aaKnown RBP18.44■□□□□ 0.54
UBE3B-202ENST00000342494 PHF14O94880 888 aa18.44■□□□□ 0.54
UBE3B-202ENST00000342494 GAPVD1Q14C86 1478 aa18.44■□□□□ 0.54
UBE3B-202ENST00000342494 API5Q9BZZ5 524 aaKnown RBP18.43■□□□□ 0.54
UBE3B-202ENST00000342494 G3BP1Q13283 466 aaKnown RBP eCLIP18.43■□□□□ 0.54
UBE3B-202ENST00000342494 CWC22Q9HCG8 908 aaKnown RBP18.42■□□□□ 0.54
UBE3B-202ENST00000342494 NUTM2GQ5VZR2 741 aa18.42■□□□□ 0.54
UBE3B-202ENST00000342494 GOLGA6L3A6NEY3 463 aa18.42■□□□□ 0.54
UBE3B-202ENST00000342494 ZKSCAN1P17029 563 aaPredicted RBP18.42■□□□□ 0.54
UBE3B-202ENST00000342494 TRIM29Q14134 588 aa18.41■□□□□ 0.54
UBE3B-202ENST00000342494 MCTP1Q6DN14 999 aa18.41■□□□□ 0.54
UBE3B-202ENST00000342494 TSPYL4Q9UJ04 414 aa18.41■□□□□ 0.54
UBE3B-202ENST00000342494 COG6Q9Y2V7 657 aa18.41■□□□□ 0.54
UBE3B-202ENST00000342494 DEKP35659 375 aaKnown RBP18.4■□□□□ 0.54
UBE3B-202ENST00000342494 ATP6V1DQ9Y5K8 247 aa18.4■□□□□ 0.54
UBE3B-202ENST00000342494 MYOM3Q5VTT5 1437 aa18.4■□□□□ 0.54
UBE3B-202ENST00000342494 TRDNQ13061 729 aa18.4■□□□□ 0.54
UBE3B-202ENST00000342494 CENPQQ7L2Z9 268 aaPredicted RBP18.4■□□□□ 0.54
UBE3B-202ENST00000342494 PLIN1O60240 522 aa18.39■□□□□ 0.54
UBE3B-202ENST00000342494 TSR1Q2NL82 804 aaKnown RBP18.39■□□□□ 0.54
UBE3B-202ENST00000342494 NLRP6P59044 892 aa18.39■□□□□ 0.53
UBE3B-202ENST00000342494 CPLX1O14810 134 aa18.39■□□□□ 0.53
UBE3B-202ENST00000342494 DDX19BQ9UMR2 479 aa18.39■□□□□ 0.53
UBE3B-202ENST00000342494 DCAF8L1A6NGE4 600 aa18.39■□□□□ 0.53
UBE3B-202ENST00000342494 ANO8Q9HCE9 1232 aaPredicted RBP18.38■□□□□ 0.53
UBE3B-202ENST00000342494 WWC1Q8IX03 1113 aa18.38■□□□□ 0.53
UBE3B-202ENST00000342494 TPM2P07951 284 aa18.38■□□□□ 0.53
UBE3B-202ENST00000342494 RIC3Q7Z5B4 369 aa18.38■□□□□ 0.53
UBE3B-202ENST00000342494 PRKRIP1Q9H875 184 aaPredicted RBP18.37■□□□□ 0.53
UBE3B-202ENST00000342494 HMOX1P09601 288 aa18.37■□□□□ 0.53
UBE3B-202ENST00000342494 ROCK1Q13464 1354 aa18.37■□□□□ 0.53
UBE3B-202ENST00000342494 STAC3Q96MF2 364 aa18.36■□□□□ 0.53
UBE3B-202ENST00000342494 MIA2Q96PC5 1412 aa18.36■□□□□ 0.53
UBE3B-202ENST00000342494 AIMP1Q12904 312 aaKnown RBP18.36■□□□□ 0.53
UBE3B-202ENST00000342494 USP35Q9P2H5 1018 aa18.36■□□□□ 0.53
UBE3B-202ENST00000342494 REC8O95072 547 aa18.36■□□□□ 0.53
UBE3B-202ENST00000342494 GNAI1P63096 354 aa18.36■□□□□ 0.53
UBE3B-202ENST00000342494 ANO2Q9NQ90 1003 aa18.36■□□□□ 0.53
UBE3B-202ENST00000342494 GPRASP1Q5JY77 1395 aa18.35■□□□□ 0.53
UBE3B-202ENST00000342494 FOXD4L6Q3SYB3 417 aaPredicted RBP18.35■□□□□ 0.53
UBE3B-202ENST00000342494 FOXD4L3Q6VB84 417 aaPredicted RBP18.35■□□□□ 0.53
UBE3B-202ENST00000342494 SAMD1Q6SPF0 538 aaPredicted RBP18.35■□□□□ 0.53
UBE3B-202ENST00000342494 ERICH2A1L162 156 aa18.35■□□□□ 0.53
UBE3B-202ENST00000342494 PROSER2Q86WR7 435 aaPredicted RBP18.35■□□□□ 0.53
UBE3B-202ENST00000342494 GGNBP2Q9H3C7 697 aa18.35■□□□□ 0.53
UBE3B-202ENST00000342494 NFXL1Q6ZNB6 911 aa18.34■□□□□ 0.53
UBE3B-202ENST00000342494 DZIP1LQ8IYY4 767 aaKnown RBP18.34■□□□□ 0.53
UBE3B-202ENST00000342494 GOLGA6L1Q8N7Z2 621 aa18.34■□□□□ 0.53
UBE3B-202ENST00000342494 IPO9Q96P70 1041 aaKnown RBP18.34■□□□□ 0.53
UBE3B-202ENST00000342494 FGD5Q6ZNL6 1462 aa18.34■□□□□ 0.53
UBE3B-202ENST00000342494 RUNDC1Q96C34 613 aa18.34■□□□□ 0.53
UBE3B-202ENST00000342494 RNF20Q5VTR2 975 aa18.34■□□□□ 0.53
UBE3B-202ENST00000342494 CABP2Q9NPB3 220 aa18.34■□□□□ 0.53
UBE3B-202ENST00000342494 SMARCA4P51532 1647 aa18.34■□□□□ 0.53
UBE3B-202ENST00000342494 HSP90AB4PQ58FF6 505 aa18.34■□□□□ 0.53
UBE3B-202ENST00000342494 CCDC47Q96A33 483 aaKnown RBP18.34■□□□□ 0.53
UBE3B-202ENST00000342494 BECN2A8MW95 431 aa18.33■□□□□ 0.53
UBE3B-202ENST00000342494 ESCO1Q5FWF5 840 aa18.33■□□□□ 0.53
UBE3B-202ENST00000342494 TXNDC2Q86VQ3 553 aa18.33■□□□□ 0.53
UBE3B-202ENST00000342494 ZNF644Q9H582 1327 aaPredicted RBP18.33■□□□□ 0.53
UBE3B-202ENST00000342494 GOLGA6L19H0YKK7 550 aa18.33■□□□□ 0.53
UBE3B-202ENST00000342494 WASHC2AQ641Q2 1341 aa18.33■□□□□ 0.52
UBE3B-202ENST00000342494 TPM1P09493 284 aa18.33■□□□□ 0.52
UBE3B-202ENST00000342494 CCDC43Q96MW1 224 aaKnown RBP18.33■□□□□ 0.52
UBE3B-202ENST00000342494 TMEM132EQ6IEE7 984 aa18.32■□□□□ 0.52
UBE3B-202ENST00000342494 NEUROD6Q96NK8 337 aa18.32■□□□□ 0.52
UBE3B-202ENST00000342494 RAD54L2Q9Y4B4 1467 aa18.32■□□□□ 0.52
UBE3B-202ENST00000342494 CRBNQ96SW2 442 aa18.32■□□□□ 0.52
UBE3B-202ENST00000342494 RRP1P56182 461 aaKnown RBP18.32■□□□□ 0.52
UBE3B-202ENST00000342494 ABTB2Q8N961 1025 aa18.31■□□□□ 0.52
UBE3B-202ENST00000342494 FAM161AQ3B820 660 aa18.31■□□□□ 0.52
UBE3B-202ENST00000342494 DDX11L8A8MPP1 907 aa18.31■□□□□ 0.52
UBE3B-202ENST00000342494 CNKSR2Q8WXI2 1034 aa18.3■□□□□ 0.52
UBE3B-202ENST00000342494 CCDC27Q2M243 656 aa18.3■□□□□ 0.52
UBE3B-202ENST00000342494 EXOC6Q8TAG9 804 aa18.3■□□□□ 0.52
UBE3B-202ENST00000342494 ARID3AQ99856 593 aa18.3■□□□□ 0.52
UBE3B-202ENST00000342494 AQRO60306 1485 aaKnown RBP eCLIP18.29■□□□□ 0.521e-6■■■■■ 33.2
UBE3B-202ENST00000342494 ERC2O15083 957 aa18.29■□□□□ 0.52
UBE3B-202ENST00000342494 RUSC2Q8N2Y8 1516 aa18.29■□□□□ 0.52
UBE3B-202ENST00000342494 IGF1RP08069 1367 aa18.29■□□□□ 0.52
UBE3B-202ENST00000342494 AFAP1Q8N556 730 aa18.29■□□□□ 0.52
UBE3B-202ENST00000342494 DDX49Q9Y6V7 483 aaKnown RBP18.28■□□□□ 0.52
UBE3B-202ENST00000342494 FYB1O15117 783 aa18.28■□□□□ 0.52
UBE3B-202ENST00000342494 PCMTD1Q96MG8 357 aaPredicted RBP18.28■□□□□ 0.52
UBE3B-202ENST00000342494 STRN4Q9NRL3 753 aa18.28■□□□□ 0.52
UBE3B-202ENST00000342494 WASHC4Q2M389 1173 aa18.28■□□□□ 0.52
UBE3B-202ENST00000342494 FAM177BA6PVY3 158 aa18.26■□□□□ 0.51
UBE3B-202ENST00000342494 SF3B2Q13435 895 aaKnown RBP18.26■□□□□ 0.51
UBE3B-202ENST00000342494 RBM42Q9BTD8 480 aaKnown RBP18.26■□□□□ 0.51
UBE3B-202ENST00000342494 KRI1Q8N9T8 703 aaKnown RBP18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms