RNA–Protein interactions for RNA: ENST00000342192.8

UBE2L3-201, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2L3, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-201ENST00000342192 FANCAO15360 1455 aa16.4■□□□□ 0.22
UBE2L3-201ENST00000342192 KIAA1210Q9ULL0 1709 aa16.4■□□□□ 0.22
UBE2L3-201ENST00000342192 KANK1Q14678 1352 aa16.38■□□□□ 0.21
UBE2L3-201ENST00000342192 MYOM1P52179 1685 aa16.38■□□□□ 0.21
UBE2L3-201ENST00000342192 MROH1Q8NDA8 1641 aa16.38■□□□□ 0.21
UBE2L3-201ENST00000342192 IL27Q8NEV9 243 aa16.37■□□□□ 0.21
UBE2L3-201ENST00000342192 EXOC6Q8TAG9 804 aa16.37■□□□□ 0.21
UBE2L3-201ENST00000342192 CDCA7LQ96GN5 454 aa16.37■□□□□ 0.21
UBE2L3-201ENST00000342192 CDCA8Q53HL2 280 aa16.36■□□□□ 0.21
UBE2L3-201ENST00000342192 ADGRL1O94910 1474 aa16.36■□□□□ 0.21
UBE2L3-201ENST00000342192 EIF3AQ14152 1382 aaKnown RBP16.35■□□□□ 0.21
UBE2L3-201ENST00000342192 KNSTRNQ9Y448 316 aa16.35■□□□□ 0.21
UBE2L3-201ENST00000342192 ASXL1Q8IXJ9 1541 aa16.35■□□□□ 0.21
UBE2L3-201ENST00000342192 MYOM2P54296 1465 aa16.34■□□□□ 0.21
UBE2L3-201ENST00000342192 KDM5AP29375 1690 aaKnown RBP16.34■□□□□ 0.21
UBE2L3-201ENST00000342192 AMER1Q5JTC6 1135 aaPredicted RBP16.34■□□□□ 0.21
UBE2L3-201ENST00000342192 MAP3K4Q9Y6R4 1608 aa16.34■□□□□ 0.21
UBE2L3-201ENST00000342192 PPP2R1AP30153 589 aa16.33■□□□□ 0.2
UBE2L3-201ENST00000342192 ABCA6Q8N139 1617 aa16.33■□□□□ 0.2
UBE2L3-201ENST00000342192 EFCAB6Q5THR3 1501 aa16.33■□□□□ 0.2
UBE2L3-201ENST00000342192 IFT172Q9UG01 1749 aa16.32■□□□□ 0.2
UBE2L3-201ENST00000342192 PIK3C2GO75747 1445 aa16.31■□□□□ 0.2
UBE2L3-201ENST00000342192 NPC1L1Q9UHC9 1359 aa16.31■□□□□ 0.2
UBE2L3-201ENST00000342192 KIF3BO15066 747 aa16.31■□□□□ 0.2
UBE2L3-201ENST00000342192 UGGT1Q9NYU2 1555 aa16.31■□□□□ 0.2
UBE2L3-201ENST00000342192 ADAMTS8Q9UP79 889 aa16.31■□□□□ 0.2
UBE2L3-201ENST00000342192 NOP58Q9Y2X3 529 aaKnown RBP16.31■□□□□ 0.2
UBE2L3-201ENST00000342192 KIF1BO60333 1816 aa16.3■□□□□ 0.2
UBE2L3-201ENST00000342192 KIDINS220Q9ULH0 1771 aa16.29■□□□□ 0.2
UBE2L3-201ENST00000342192 EIF5BO60841 1220 aaKnown RBP16.29■□□□□ 0.2
UBE2L3-201ENST00000342192 PPRC1Q5VV67 1664 aaKnown RBP16.29■□□□□ 0.2
UBE2L3-201ENST00000342192 MYT1LQ9UL68 1186 aa16.29■□□□□ 0.2
UBE2L3-201ENST00000342192 MROH2AA6NES4 1674 aa16.28■□□□□ 0.2
UBE2L3-201ENST00000342192 ANP32AP39687 249 aaKnown RBP16.28■□□□□ 0.2
UBE2L3-201ENST00000342192 LMTK2Q8IWU2 1503 aa16.28■□□□□ 0.2
UBE2L3-201ENST00000342192 WDR43Q15061 677 aaKnown RBP eCLIP16.28■□□□□ 0.2
UBE2L3-201ENST00000342192 ASXL2Q76L83 1435 aa16.28■□□□□ 0.2
UBE2L3-201ENST00000342192 PLEKHH1Q9ULM0 1364 aa16.27■□□□□ 0.2
UBE2L3-201ENST00000342192 TCERG1O14776 1098 aaKnown RBP16.27■□□□□ 0.2
UBE2L3-201ENST00000342192 ERVK-7P63135 1459 aa16.27■□□□□ 0.19
UBE2L3-201ENST00000342192 MYO3AQ8NEV4 1616 aa16.27■□□□□ 0.19
UBE2L3-201ENST00000342192 NRXN1Q9ULB1 1477 aa16.26■□□□□ 0.19
UBE2L3-201ENST00000342192 ZNF521Q96K83 1311 aa16.25■□□□□ 0.19
UBE2L3-201ENST00000342192 PLIN1O60240 522 aa16.25■□□□□ 0.19
UBE2L3-201ENST00000342192 IPO9Q96P70 1041 aaKnown RBP16.25■□□□□ 0.19
UBE2L3-201ENST00000342192 SLC24A1O60721 1099 aa16.24■□□□□ 0.19
UBE2L3-201ENST00000342192 ZNF518AQ6AHZ1 1483 aa16.24■□□□□ 0.19
UBE2L3-201ENST00000342192 ADGRB3O60242 1522 aa16.24■□□□□ 0.19
UBE2L3-201ENST00000342192 CFAP70Q5T0N1 1121 aa16.24■□□□□ 0.19
UBE2L3-201ENST00000342192 ADGRF5Q8IZF2 1346 aa16.24■□□□□ 0.19
UBE2L3-201ENST00000342192 PAK3O75914 559 aaPredicted RBP16.23■□□□□ 0.19
UBE2L3-201ENST00000342192 CRBNQ96SW2 442 aa16.23■□□□□ 0.19
UBE2L3-201ENST00000342192 MS4A1P11836 297 aa16.22■□□□□ 0.19
UBE2L3-201ENST00000342192 DUSP27Q5VZP5 1158 aa16.22■□□□□ 0.19
UBE2L3-201ENST00000342192 SETBP1Q9Y6X0 1596 aa16.21■□□□□ 0.19
UBE2L3-201ENST00000342192 SBNO2Q9Y2G9 1366 aa16.21■□□□□ 0.19
UBE2L3-201ENST00000342192 CFAP74Q9C0B2 1584 aa16.2■□□□□ 0.18
UBE2L3-201ENST00000342192 PKNOX2Q96KN3 472 aa16.2■□□□□ 0.18
UBE2L3-201ENST00000342192 PLEKHG5O94827 1062 aa16.19■□□□□ 0.18
UBE2L3-201ENST00000342192 GOLGA2Q08379 1002 aa16.19■□□□□ 0.18
UBE2L3-201ENST00000342192 PDE4AP27815 886 aa16.18■□□□□ 0.18
UBE2L3-201ENST00000342192 FRMPD1Q5SYB0 1578 aa16.18■□□□□ 0.18
UBE2L3-201ENST00000342192 NOS1P29475 1434 aa16.18■□□□□ 0.18
UBE2L3-201ENST00000342192 ZC3H13Q5T200 1668 aaKnown RBP16.18■□□□□ 0.18
UBE2L3-201ENST00000342192 PPLO60437 1756 aa16.18■□□□□ 0.18
UBE2L3-201ENST00000342192 C20orf194Q5TEA3 1177 aa16.17■□□□□ 0.18
UBE2L3-201ENST00000342192 POGZQ7Z3K3 1410 aa16.17■□□□□ 0.18
UBE2L3-201ENST00000342192 BACH2Q9BYV9 841 aa16.17■□□□□ 0.18
UBE2L3-201ENST00000342192 SLFN5Q08AF3 891 aa16.16■□□□□ 0.18
UBE2L3-201ENST00000342192 ZBTB47Q9UFB7 747 aaPredicted RBP16.16■□□□□ 0.18
UBE2L3-201ENST00000342192 HECW2Q9P2P5 1572 aa16.16■□□□□ 0.18
UBE2L3-201ENST00000342192 NPATQ14207 1427 aa16.16■□□□□ 0.18
UBE2L3-201ENST00000342192 CARD14Q9BXL6 1004 aa16.16■□□□□ 0.18
UBE2L3-201ENST00000342192 MLH3Q9UHC1 1453 aa16.15■□□□□ 0.18
UBE2L3-201ENST00000342192 TRMT2AQ8IZ69 625 aaKnown RBP16.14■□□□□ 0.17
UBE2L3-201ENST00000342192 QRICH2Q9H0J4 1663 aa16.14■□□□□ 0.17
UBE2L3-201ENST00000342192 CCDC146Q8IYE0 955 aa16.14■□□□□ 0.17
UBE2L3-201ENST00000342192 KDM2BQ8NHM5 1336 aa16.14■□□□□ 0.17
UBE2L3-201ENST00000342192 CENPJQ9HC77 1338 aaPredicted RBP16.14■□□□□ 0.17
UBE2L3-201ENST00000342192 ADGRB1O14514 1584 aa16.14■□□□□ 0.17
UBE2L3-201ENST00000342192 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.13■□□□□ 0.17
UBE2L3-201ENST00000342192 NKTRP30414 1462 aaKnown RBP16.13■□□□□ 0.17
UBE2L3-201ENST00000342192 ABCC3O15438 1527 aa16.11■□□□□ 0.17
UBE2L3-201ENST00000342192 CD109Q6YHK3 1445 aa16.11■□□□□ 0.17
UBE2L3-201ENST00000342192 POLR3AO14802 1390 aaPredicted RBP16.11■□□□□ 0.17
UBE2L3-201ENST00000342192 APAF1O14727 1248 aa16.11■□□□□ 0.17
UBE2L3-201ENST00000342192 NPM2Q86SE8 214 aaKnown RBP16.11■□□□□ 0.17
UBE2L3-201ENST00000342192 NGEFQ8N5V2 710 aa16.1■□□□□ 0.17
UBE2L3-201ENST00000342192 USP32Q8NFA0 1604 aa16.1■□□□□ 0.17
UBE2L3-201ENST00000342192 CENPQQ7L2Z9 268 aaPredicted RBP16.1■□□□□ 0.17
UBE2L3-201ENST00000342192 SHPRHQ149N8 1683 aa16.1■□□□□ 0.17
UBE2L3-201ENST00000342192 NSD3Q9BZ95 1437 aa16.1■□□□□ 0.17
UBE2L3-201ENST00000342192 CAMSAP1Q5T5Y3 1602 aa16.1■□□□□ 0.17
UBE2L3-201ENST00000342192 CHGAP10645 457 aaKnown RBP16.09■□□□□ 0.17
UBE2L3-201ENST00000342192 C14orf93Q9H972 538 aaKnown RBP16.09■□□□□ 0.17
UBE2L3-201ENST00000342192 SPINK5Q9NQ38 1064 aaPredicted RBP16.09■□□□□ 0.17
UBE2L3-201ENST00000342192 E9PSI1 815 aa16.08■□□□□ 0.17
UBE2L3-201ENST00000342192 NPM1P06748 294 aaKnown RBP eCLIP16.08■□□□□ 0.16
UBE2L3-201ENST00000342192 RTL5Q5HYW3 569 aaPredicted RBP16.08■□□□□ 0.16
UBE2L3-201ENST00000342192 SKAP1Q86WV1 359 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms