RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 HSPA2P54652 639 aa16.37■□□□□ 0.21
LIN54-201ENST00000340417 NGEFQ8N5V2 710 aa16.37■□□□□ 0.21
LIN54-201ENST00000340417 DIAPH1O60610 1272 aaKnown RBP16.37■□□□□ 0.21
LIN54-201ENST00000340417 PDE3BQ13370 1112 aa16.37■□□□□ 0.21
LIN54-201ENST00000340417 HDAC5Q9UQL6 1122 aa16.37■□□□□ 0.21
LIN54-201ENST00000340417 ADAMTS2O95450 1211 aa16.36■□□□□ 0.21
LIN54-201ENST00000340417 RBM33Q96EV2 1170 aaKnown RBP16.36■□□□□ 0.21
LIN54-201ENST00000340417 GGNBP2Q9H3C7 697 aa16.36■□□□□ 0.21
LIN54-201ENST00000340417 ATP10BO94823 1461 aa16.36■□□□□ 0.21
LIN54-201ENST00000340417 RTEL1-TNFRSF6BF6WH68 1400 aa16.35■□□□□ 0.21
LIN54-201ENST00000340417 KCNJ4P48050 445 aa16.35■□□□□ 0.21
LIN54-201ENST00000340417 FRAT2O75474 233 aaPredicted RBP16.35■□□□□ 0.21
LIN54-201ENST00000340417 RAPGEF6Q8TEU7 1601 aa16.35■□□□□ 0.21
LIN54-201ENST00000340417 DNAJC5Q9H3Z4 198 aa16.35■□□□□ 0.21
LIN54-201ENST00000340417 PPP1R1BQ9UD71 204 aaPredicted RBP16.35■□□□□ 0.21
LIN54-201ENST00000340417 SLC4A10Q6U841 1118 aa16.34■□□□□ 0.21
LIN54-201ENST00000340417 NGLY1Q96IV0 654 aa16.34■□□□□ 0.21
LIN54-201ENST00000340417 AMOTL2Q9Y2J4 779 aa16.34■□□□□ 0.21
LIN54-201ENST00000340417 PLCH2O75038 1416 aa16.33■□□□□ 0.21
LIN54-201ENST00000340417 TAOK2Q9UL54 1235 aa16.33■□□□□ 0.21
LIN54-201ENST00000340417 ANKRD30BQ9BXX2 1392 aa16.33■□□□□ 0.2
LIN54-201ENST00000340417 ZNF692Q9BU19 519 aaPredicted RBP16.33■□□□□ 0.2
LIN54-201ENST00000340417 SMG6Q86US8 1419 aaKnown RBP16.32■□□□□ 0.2
LIN54-201ENST00000340417 FGD1P98174 961 aa16.32■□□□□ 0.2
LIN54-201ENST00000340417 ABCC2Q92887 1545 aa16.32■□□□□ 0.2
LIN54-201ENST00000340417 KIAA1107Q9UPP5 1409 aa16.32■□□□□ 0.2
LIN54-201ENST00000340417 DHX29Q7Z478 1369 aaKnown RBP16.32■□□□□ 0.2
LIN54-201ENST00000340417 FAM135AQ9P2D6 1515 aa16.31■□□□□ 0.2
LIN54-201ENST00000340417 EIF2S2P20042 333 aaKnown RBP16.31■□□□□ 0.2
LIN54-201ENST00000340417 RRP7AQ9Y3A4 280 aaKnown RBP16.31■□□□□ 0.2
LIN54-201ENST00000340417 APBB1O00213 710 aa16.31■□□□□ 0.2
LIN54-201ENST00000340417 TATP17735 454 aaPredicted RBP16.31■□□□□ 0.2
LIN54-201ENST00000340417 IDI1Q13907 227 aa16.31■□□□□ 0.2
LIN54-201ENST00000340417 ZNF518AQ6AHZ1 1483 aa16.3■□□□□ 0.2
LIN54-201ENST00000340417 EIF5BO60841 1220 aaKnown RBP16.29■□□□□ 0.2
LIN54-201ENST00000340417 CABP1Q9NZU7 370 aa16.29■□□□□ 0.2
LIN54-201ENST00000340417 NUP160Q12769 1436 aa16.29■□□□□ 0.2
LIN54-201ENST00000340417 MSH6P52701 1360 aa16.29■□□□□ 0.2
LIN54-201ENST00000340417 DDX54Q8TDD1 881 aaKnown RBP16.29■□□□□ 0.2
LIN54-201ENST00000340417 NAP1L2Q9ULW6 460 aaPredicted RBP16.28■□□□□ 0.2
LIN54-201ENST00000340417 SMC4Q9NTJ3 1288 aa16.28■□□□□ 0.2
LIN54-201ENST00000340417 ZC3H6P61129 1189 aaKnown RBP16.28■□□□□ 0.2
LIN54-201ENST00000340417 CADPS2Q86UW7 1296 aa16.28■□□□□ 0.2
LIN54-201ENST00000340417 RBM42Q9BTD8 480 aaKnown RBP16.27■□□□□ 0.2
LIN54-201ENST00000340417 PBRM1Q86U86 1689 aa16.27■□□□□ 0.19
LIN54-201ENST00000340417 ITPRIPQ8IWB1 547 aa16.27■□□□□ 0.19
LIN54-201ENST00000340417 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.26■□□□□ 0.19
LIN54-201ENST00000340417 KIAA0556O60303 1618 aa16.26■□□□□ 0.19
LIN54-201ENST00000340417 NEXNQ0ZGT2 675 aa16.26■□□□□ 0.19
LIN54-201ENST00000340417 TULP1O00294 542 aaPredicted RBP16.26■□□□□ 0.19
LIN54-201ENST00000340417 PLEKHO1Q53GL0 409 aaPredicted RBP16.26■□□□□ 0.19
LIN54-201ENST00000340417 HMOX1P09601 288 aa16.26■□□□□ 0.19
LIN54-201ENST00000340417 WASHC2AQ641Q2 1341 aa16.26■□□□□ 0.19
LIN54-201ENST00000340417 WAPLQ7Z5K2 1190 aa16.25■□□□□ 0.19
LIN54-201ENST00000340417 LRPPRCP42704 1394 aaKnown RBP16.25■□□□□ 0.19
LIN54-201ENST00000340417 ELL2O00472 640 aaPredicted RBP16.25■□□□□ 0.19
LIN54-201ENST00000340417 THOC2Q8NI27 1593 aaKnown RBP16.25■□□□□ 0.19
LIN54-201ENST00000340417 UGGT2Q9NYU1 1516 aa16.25■□□□□ 0.19
LIN54-201ENST00000340417 NCKAP5LQ9HCH0 1330 aa16.25■□□□□ 0.19
LIN54-201ENST00000340417 CEP170Q5SW79 1584 aa16.24■□□□□ 0.19
LIN54-201ENST00000340417 ROCK1Q13464 1354 aa16.24■□□□□ 0.19
LIN54-201ENST00000340417 MYBBP1AQ9BQG0 1328 aaKnown RBP16.24■□□□□ 0.19
LIN54-201ENST00000340417 FOXO3O43524 673 aa16.24■□□□□ 0.19
LIN54-201ENST00000340417 A2MP01023 1474 aa16.24■□□□□ 0.19
LIN54-201ENST00000340417 NUDT16Q96DE0 195 aaKnown RBP16.23■□□□□ 0.19
LIN54-201ENST00000340417 NBPF1Q3BBV0 1214 aa16.23■□□□□ 0.19
LIN54-201ENST00000340417 ABCC5O15440 1437 aa16.23■□□□□ 0.19
LIN54-201ENST00000340417 CCER2I3L3R5 266 aa16.23■□□□□ 0.19
LIN54-201ENST00000340417 SUPT16HQ9Y5B9 1047 aaKnown RBP16.22■□□□□ 0.19
LIN54-201ENST00000340417 LMTK3Q96Q04 1460 aa16.22■□□□□ 0.19
LIN54-201ENST00000340417 NECTIN2Q92692 538 aa16.22■□□□□ 0.19
LIN54-201ENST00000340417 PHF8Q9UPP1 1060 aa16.22■□□□□ 0.19
LIN54-201ENST00000340417 PTPN23Q9H3S7 1636 aa16.21■□□□□ 0.19
LIN54-201ENST00000340417 DDX58O95786 925 aaKnown RBP16.21■□□□□ 0.19
LIN54-201ENST00000340417 FBXW7Q969H0 707 aa16.21■□□□□ 0.18
LIN54-201ENST00000340417 SPG7Q9UQ90 795 aa16.21■□□□□ 0.18
LIN54-201ENST00000340417 KDM5BQ9UGL1 1544 aa16.2■□□□□ 0.18
LIN54-201ENST00000340417 NUP153P49790 1475 aaKnown RBP16.2■□□□□ 0.18
LIN54-201ENST00000340417 UHRF1BP1Q6BDS2 1440 aa16.2■□□□□ 0.18
LIN54-201ENST00000340417 CCDC61Q9Y6R9 512 aa16.2■□□□□ 0.18
LIN54-201ENST00000340417 UHRF1BP1LA0JNW5 1464 aa16.2■□□□□ 0.18
LIN54-201ENST00000340417 KCNH5Q8NCM2 988 aa16.2■□□□□ 0.18
LIN54-201ENST00000340417 GPATCH3Q96I76 525 aa16.19■□□□□ 0.18
LIN54-201ENST00000340417 CTTNBP2Q8WZ74 1663 aa16.19■□□□□ 0.18
LIN54-201ENST00000340417 ABCC10Q5T3U5 1492 aa16.19■□□□□ 0.18
LIN54-201ENST00000340417 RGS3P49796 1198 aa16.19■□□□□ 0.18
LIN54-201ENST00000340417 RIPK4P57078 832 aa16.19■□□□□ 0.18
LIN54-201ENST00000340417 TSPYL4Q9UJ04 414 aa16.19■□□□□ 0.18
LIN54-201ENST00000340417 HMGB2P26583 209 aaKnown RBP16.19■□□□□ 0.18
LIN54-201ENST00000340417 WDR97A6NE52 1622 aa16.19■□□□□ 0.18
LIN54-201ENST00000340417 GPATCH8Q9UKJ3 1502 aaKnown RBP16.19■□□□□ 0.18
LIN54-201ENST00000340417 HMMRO75330 724 aa16.18■□□□□ 0.18
LIN54-201ENST00000340417 KRT28Q7Z3Y7 464 aa16.18■□□□□ 0.18
LIN54-201ENST00000340417 CABP4P57796 275 aa16.18■□□□□ 0.18
LIN54-201ENST00000340417 SLC12A5Q9H2X9 1139 aa16.18■□□□□ 0.18
LIN54-201ENST00000340417 ATAD2Q6PL18 1390 aa16.17■□□□□ 0.18
LIN54-201ENST00000340417 GAS2L2Q8NHY3 880 aa16.16■□□□□ 0.18
LIN54-201ENST00000340417 C9orf78Q9NZ63 289 aaPredicted RBP16.15■□□□□ 0.18
LIN54-201ENST00000340417 SYCP2Q9BX26 1530 aa16.15■□□□□ 0.18
LIN54-201ENST00000340417 ZMYM3Q14202 1370 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms