RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 SPDYE4A6NLX3 237 aa15.36■□□□□ 0.05
BRPF3-201ENST00000339717 GOLGA6L19H0YKK7 550 aa15.36■□□□□ 0.05
BRPF3-201ENST00000339717 MRVI1Q9Y6F6 885 aa15.36■□□□□ 0.05
BRPF3-201ENST00000339717 TSPY26PQ9H489 355 aa15.36■□□□□ 0.05
BRPF3-201ENST00000339717 KIAA0754O94854 1291 aa15.35■□□□□ 0.05
BRPF3-201ENST00000339717 SETSIPP0DME0 302 aa15.35■□□□□ 0.05
BRPF3-201ENST00000339717 OGFRQ9NZT2 677 aa15.35■□□□□ 0.05
BRPF3-201ENST00000339717 KNSTRNQ9Y448 316 aa15.35■□□□□ 0.05
BRPF3-201ENST00000339717 GTF2F1P35269 517 aaKnown RBP eCLIP15.34■□□□□ 0.05
BRPF3-201ENST00000339717 TTLL5Q6EMB2 1281 aa15.34■□□□□ 0.05
BRPF3-201ENST00000339717 MCTP1Q6DN14 999 aa15.34■□□□□ 0.05
BRPF3-201ENST00000339717 CCAR2Q8N163 923 aaKnown RBP15.34■□□□□ 0.05
BRPF3-201ENST00000339717 HOMER1Q86YM7 354 aa15.33■□□□□ 0.05
BRPF3-201ENST00000339717 WRNQ14191 1432 aaPredicted RBP eCLIP15.33■□□□□ 0.05
BRPF3-201ENST00000339717 CCDC70Q6NSX1 233 aa15.33■□□□□ 0.04
BRPF3-201ENST00000339717 DNAAF4Q8WXU2 420 aa15.33■□□□□ 0.04
BRPF3-201ENST00000339717 PRKRIP1Q9H875 184 aaPredicted RBP15.33■□□□□ 0.04
BRPF3-201ENST00000339717 MPHOSPH10O00566 681 aaKnown RBP15.33■□□□□ 0.04
BRPF3-201ENST00000339717 EIF3JO75822 258 aaKnown RBP15.33■□□□□ 0.04
BRPF3-201ENST00000339717 CGNL1Q0VF96 1302 aa15.32■□□□□ 0.04
BRPF3-201ENST00000339717 C22orf23Q9BZE7 217 aa15.32■□□□□ 0.04
BRPF3-201ENST00000339717 TTC31Q49AM3 519 aaPredicted RBP15.32■□□□□ 0.04
BRPF3-201ENST00000339717 STAC3Q96MF2 364 aa15.32■□□□□ 0.04
BRPF3-201ENST00000339717 RABEP1Q15276 862 aa15.31■□□□□ 0.04
BRPF3-201ENST00000339717 DYDC1Q8WWB3 177 aa15.31■□□□□ 0.04
BRPF3-201ENST00000339717 CHMP7Q8WUX9 453 aaPredicted RBP15.31■□□□□ 0.04
BRPF3-201ENST00000339717 CCNB3Q8WWL7 1395 aa15.31■□□□□ 0.04
BRPF3-201ENST00000339717 FAM184AQ8NB25 1140 aa15.31■□□□□ 0.04
BRPF3-201ENST00000339717 A0A1B0GUL7 405 aa15.3■□□□□ 0.04
BRPF3-201ENST00000339717 RBM25P49756 843 aaKnown RBP15.3■□□□□ 0.04
BRPF3-201ENST00000339717 MNAT1P51948 309 aa15.3■□□□□ 0.04
BRPF3-201ENST00000339717 EFCC1Q9HA90 598 aa15.3■□□□□ 0.04
BRPF3-201ENST00000339717 IVLP07476 585 aa15.3■□□□□ 0.04
BRPF3-201ENST00000339717 RNF214Q8ND24 703 aa15.3■□□□□ 0.04
BRPF3-201ENST00000339717 TMCO5BA8MYB1 307 aa15.29■□□□□ 0.04
BRPF3-201ENST00000339717 TPM1P09493 284 aa15.29■□□□□ 0.04
BRPF3-201ENST00000339717 BMS1Q14692 1282 aaKnown RBP15.29■□□□□ 0.04
BRPF3-201ENST00000339717 CCP110O43303 1012 aa15.29■□□□□ 0.04
BRPF3-201ENST00000339717 SETD5Q9C0A6 1442 aa15.29■□□□□ 0.04
BRPF3-201ENST00000339717 DCTN1Q14203 1278 aa15.29■□□□□ 0.04
BRPF3-201ENST00000339717 ANKRD20A12PQ8NF67 263 aa15.29■□□□□ 0.04
BRPF3-201ENST00000339717 NINLQ9Y2I6 1382 aa15.28■□□□□ 0.04
BRPF3-201ENST00000339717 TMCO3Q6UWJ1 677 aa15.28■□□□□ 0.04
BRPF3-201ENST00000339717 BECN2A8MW95 431 aa15.28■□□□□ 0.04
BRPF3-201ENST00000339717 TOMM22Q9NS69 142 aa15.28■□□□□ 0.04
BRPF3-201ENST00000339717 DHX8Q14562 1220 aaKnown RBP15.27■□□□□ 0.04
BRPF3-201ENST00000339717 SMG6Q86US8 1419 aaKnown RBP15.27■□□□□ 0.04
BRPF3-201ENST00000339717 ESF1Q9H501 851 aaKnown RBP15.27■□□□□ 0.04
BRPF3-201ENST00000339717 GOLGA6L10A6NI86 522 aa15.27■□□□□ 0.03
BRPF3-201ENST00000339717 NF2P35240 595 aa15.27■□□□□ 0.03
BRPF3-201ENST00000339717 ARID4AP29374 1257 aaPredicted RBP15.27■□□□□ 0.03
BRPF3-201ENST00000339717 LRCH2Q5VUJ6 765 aa15.27■□□□□ 0.03
BRPF3-201ENST00000339717 CPSF2Q9P2I0 782 aaKnown RBP15.27■□□□□ 0.03
BRPF3-201ENST00000339717 KIF2AO00139 706 aaPredicted RBP15.26■□□□□ 0.03
BRPF3-201ENST00000339717 KIAA1328Q86T90 577 aa15.26■□□□□ 0.03
BRPF3-201ENST00000339717 CHIC2Q9UKJ5 165 aa15.26■□□□□ 0.03
BRPF3-201ENST00000339717 EIF3AQ14152 1382 aaKnown RBP15.25■□□□□ 0.03
BRPF3-201ENST00000339717 GOLGA2Q08379 1002 aa15.25■□□□□ 0.03
BRPF3-201ENST00000339717 SUDS3Q9H7L9 328 aaPredicted RBP15.25■□□□□ 0.03
BRPF3-201ENST00000339717 SECISBP2LQ93073 1101 aaKnown RBP15.25■□□□□ 0.03
BRPF3-201ENST00000339717 ZKSCAN5Q9Y2L8 839 aa15.25■□□□□ 0.03
BRPF3-201ENST00000339717 RRP12Q5JTH9 1297 aaKnown RBP15.24■□□□□ 0.03
BRPF3-201ENST00000339717 HMMRO75330 724 aa15.24■□□□□ 0.03
BRPF3-201ENST00000339717 ERLIN1O75477 346 aa15.24■□□□□ 0.03
BRPF3-201ENST00000339717 RUFY1Q96T51 708 aa15.23■□□□□ 0.03
BRPF3-201ENST00000339717 INCENPQ9NQS7 918 aa15.23■□□□□ 0.03
BRPF3-201ENST00000339717 PANK2Q9BZ23 570 aa15.23■□□□□ 0.03
BRPF3-201ENST00000339717 SRPK2P78362 688 aaKnown RBP15.23■□□□□ 0.03
BRPF3-201ENST00000339717 STK31Q9BXU1 1019 aa15.23■□□□□ 0.03
BRPF3-201ENST00000339717 CDCA8Q53HL2 280 aa15.22■□□□□ 0.03
BRPF3-201ENST00000339717 MYO6Q9UM54 1294 aa15.22■□□□□ 0.03
BRPF3-201ENST00000339717 KIF27Q86VH2 1401 aa15.22■□□□□ 0.03
BRPF3-201ENST00000339717 CHGAP10645 457 aaKnown RBP15.22■□□□□ 0.03
BRPF3-201ENST00000339717 DCAF11Q8TEB1 546 aa15.22■□□□□ 0.03
BRPF3-201ENST00000339717 FILIP1Q7Z7B0 1213 aa15.21■□□□□ 0.03
BRPF3-201ENST00000339717 SMC4Q9NTJ3 1288 aa15.21■□□□□ 0.03
BRPF3-201ENST00000339717 ROCK2O75116 1388 aaKnown RBP15.21■□□□□ 0.03
BRPF3-201ENST00000339717 MTUS2Q5JR59 1369 aa15.21■□□□□ 0.03
BRPF3-201ENST00000339717 NLRP13Q86W25 1043 aa15.21■□□□□ 0.03
BRPF3-201ENST00000339717 CFAP53Q96M91 514 aa15.21■□□□□ 0.03
BRPF3-201ENST00000339717 IPO8O15397 1037 aaKnown RBP15.2■□□□□ 0.02
BRPF3-201ENST00000339717 PLIN1O60240 522 aa15.2■□□□□ 0.02
BRPF3-201ENST00000339717 TSPY4P0CV99 314 aa15.2■□□□□ 0.02
BRPF3-201ENST00000339717 TSPY10P0CW01 314 aa15.2■□□□□ 0.02
BRPF3-201ENST00000339717 ATP6V1AP38606 617 aa15.2■□□□□ 0.02
BRPF3-201ENST00000339717 BRMS1Q9HCU9 246 aa15.2■□□□□ 0.02
BRPF3-201ENST00000339717 RSPH14Q9UHP6 348 aa15.19■□□□□ 0.02
BRPF3-201ENST00000339717 C10orf67Q8IYJ2 551 aa15.19■□□□□ 0.02
BRPF3-201ENST00000339717 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.19■□□□□ 0.02
BRPF3-201ENST00000339717 CEP164Q9UPV0 1460 aa15.19■□□□□ 0.02
BRPF3-201ENST00000339717 GTF2E1P29083 439 aaPredicted RBP15.18■□□□□ 0.02
BRPF3-201ENST00000339717 UBXN4Q92575 508 aa15.18■□□□□ 0.02
BRPF3-201ENST00000339717 PAXBP1Q9Y5B6 917 aa15.18■□□□□ 0.02
BRPF3-201ENST00000339717 GOLGA6L7A0A1B0GV03 622 aa15.18■□□□□ 0.02
BRPF3-201ENST00000339717 MAP2K2P36507 400 aa15.18■□□□□ 0.02
BRPF3-201ENST00000339717 CARD11Q9BXL7 1154 aa15.18■□□□□ 0.02
BRPF3-201ENST00000339717 MEX3CQ5U5Q3 659 aaKnown RBP15.18■□□□□ 0.02
BRPF3-201ENST00000339717 CERS3Q8IU89 383 aa15.17■□□□□ 0.02
BRPF3-201ENST00000339717 RAB3GAP2Q9H2M9 1393 aa15.17■□□□□ 0.02
BRPF3-201ENST00000339717 FOXD4L5Q5VV16 416 aaPredicted RBP15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms