RNA–Protein interactions for RNA: ENST00000335762.9

CACNA1C-202, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 6,968 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-202ENST00000335762 ANO2Q9NQ90 1003 aa12.73□□□□□ -0.37
CACNA1C-202ENST00000335762 AMPHP49418 695 aa12.73□□□□□ -0.37
CACNA1C-202ENST00000335762 TRDNQ13061 729 aa12.72□□□□□ -0.37
CACNA1C-202ENST00000335762 CAGE1Q8TC20 777 aa12.72□□□□□ -0.37
CACNA1C-202ENST00000335762 RNF20Q5VTR2 975 aa12.72□□□□□ -0.37
CACNA1C-202ENST00000335762 CCDC43Q96MW1 224 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-202ENST00000335762 SMC3Q9UQE7 1217 aa12.72□□□□□ -0.37
CACNA1C-202ENST00000335762 PHLDB1Q86UU1 1377 aa12.72□□□□□ -0.37
CACNA1C-202ENST00000335762 BCL2L13Q9BXK5 485 aa12.72□□□□□ -0.37
CACNA1C-202ENST00000335762 BCL11BQ9C0K0 894 aaPredicted RBP12.72□□□□□ -0.37
CACNA1C-202ENST00000335762 CGNL1Q0VF96 1302 aa12.72□□□□□ -0.37
CACNA1C-202ENST00000335762 NOL10Q9BSC4 688 aaKnown RBP12.72□□□□□ -0.37
CACNA1C-202ENST00000335762 HSP90AB2PQ58FF8 381 aa12.71□□□□□ -0.37
CACNA1C-202ENST00000335762 ZFYVE27Q5T4F4 411 aa12.71□□□□□ -0.37
CACNA1C-202ENST00000335762 CCDC39Q9UFE4 941 aa12.71□□□□□ -0.37
CACNA1C-202ENST00000335762 MYO6Q9UM54 1294 aa12.7□□□□□ -0.38
CACNA1C-202ENST00000335762 FOXD1Q16676 465 aa12.7□□□□□ -0.38
CACNA1C-202ENST00000335762 LTV1Q96GA3 475 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-202ENST00000335762 RRP7AQ9Y3A4 280 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-202ENST00000335762 CCDC180Q9P1Z9 1646 aa12.7□□□□□ -0.38
CACNA1C-202ENST00000335762 LEKR1Q6ZMV7 388 aa12.7□□□□□ -0.38
CACNA1C-202ENST00000335762 EXOC6Q8TAG9 804 aa12.7□□□□□ -0.38
CACNA1C-202ENST00000335762 FANCIQ9NVI1 1328 aa12.7□□□□□ -0.38
CACNA1C-202ENST00000335762 MRE11P49959 708 aa12.7□□□□□ -0.38
CACNA1C-202ENST00000335762 SAFBQ15424 915 aaKnown RBP eCLIP12.7□□□□□ -0.38
CACNA1C-202ENST00000335762 TRIM34Q9BYJ4 488 aa12.7□□□□□ -0.38
CACNA1C-202ENST00000335762 SETD5Q9C0A6 1442 aa12.7□□□□□ -0.38
CACNA1C-202ENST00000335762 PDILTQ8N807 584 aa12.7□□□□□ -0.38
CACNA1C-202ENST00000335762 EIF3AQ14152 1382 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-202ENST00000335762 COG6Q9Y2V7 657 aa12.69□□□□□ -0.38
CACNA1C-202ENST00000335762 NGDNQ8NEJ9 315 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-202ENST00000335762 NAT10Q9H0A0 1025 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-202ENST00000335762 PLIN1O60240 522 aa12.69□□□□□ -0.38
CACNA1C-202ENST00000335762 AXDND1Q5T1B0 1012 aaPredicted RBP12.69□□□□□ -0.38
CACNA1C-202ENST00000335762 NFXL1Q6ZNB6 911 aa12.68□□□□□ -0.38
CACNA1C-202ENST00000335762 IFIT2P09913 472 aaKnown RBP12.68□□□□□ -0.38
CACNA1C-202ENST00000335762 PKNOX2Q96KN3 472 aa12.68□□□□□ -0.38
CACNA1C-202ENST00000335762 NASPP49321 788 aaPredicted RBP12.68□□□□□ -0.38
CACNA1C-202ENST00000335762 OLFM4Q6UX06 510 aa12.68□□□□□ -0.38
CACNA1C-202ENST00000335762 NEXNQ0ZGT2 675 aa12.68□□□□□ -0.38
CACNA1C-202ENST00000335762 SDF4Q9BRK5 362 aa12.68□□□□□ -0.38
CACNA1C-202ENST00000335762 SKIDA1Q1XH10 827 aa12.67□□□□□ -0.38
CACNA1C-202ENST00000335762 ZRSR2Q15696 482 aaKnown RBP12.67□□□□□ -0.38
CACNA1C-202ENST00000335762 CRBNQ96SW2 442 aa12.67□□□□□ -0.38
CACNA1C-202ENST00000335762 KIF27Q86VH2 1401 aa12.67□□□□□ -0.38
CACNA1C-202ENST00000335762 ERICH2A1L162 156 aa12.66□□□□□ -0.38
CACNA1C-202ENST00000335762 E9PSI1 815 aa12.66□□□□□ -0.38
CACNA1C-202ENST00000335762 RRP1P56182 461 aaKnown RBP12.66□□□□□ -0.38
CACNA1C-202ENST00000335762 TTLL5Q6EMB2 1281 aa12.66□□□□□ -0.38
CACNA1C-202ENST00000335762 C9orf78Q9NZ63 289 aaPredicted RBP12.66□□□□□ -0.38
CACNA1C-202ENST00000335762 CT47B1P0C2W7 299 aaPredicted RBP12.66□□□□□ -0.38
CACNA1C-202ENST00000335762 EPS15P42566 896 aa12.66□□□□□ -0.38
CACNA1C-202ENST00000335762 HMGN5P82970 282 aaKnown RBP12.66□□□□□ -0.38
CACNA1C-202ENST00000335762 RNF214Q8ND24 703 aa12.66□□□□□ -0.38
CACNA1C-202ENST00000335762 CEP164Q9UPV0 1460 aa12.66□□□□□ -0.38
CACNA1C-202ENST00000335762 DDX19BQ9UMR2 479 aa12.65□□□□□ -0.38
CACNA1C-202ENST00000335762 NEFHP12036 1026 aa12.65□□□□□ -0.38
CACNA1C-202ENST00000335762 TRIM5Q9C035 493 aa12.65□□□□□ -0.38
CACNA1C-202ENST00000335762 GOLGA6L7A0A1B0GV03 622 aa12.65□□□□□ -0.38
CACNA1C-202ENST00000335762 MPHOSPH9Q99550 1183 aa12.64□□□□□ -0.39
CACNA1C-202ENST00000335762 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.64□□□□□ -0.39
CACNA1C-202ENST00000335762 FHAD1B1AJZ9 1412 aa12.64□□□□□ -0.39
CACNA1C-202ENST00000335762 KIAA0754O94854 1291 aa12.64□□□□□ -0.39
CACNA1C-202ENST00000335762 INTS3Q68E01 1043 aaKnown RBP12.64□□□□□ -0.39
CACNA1C-202ENST00000335762 FOSBP53539 338 aa12.63□□□□□ -0.39
CACNA1C-202ENST00000335762 TEFQ10587 303 aa12.63□□□□□ -0.39
CACNA1C-202ENST00000335762 NFKBIBQ15653 356 aa12.63□□□□□ -0.39
CACNA1C-202ENST00000335762 CCP110O43303 1012 aa12.63□□□□□ -0.39
CACNA1C-202ENST00000335762 MYBBP1AQ9BQG0 1328 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-202ENST00000335762 NUP155O75694 1391 aa12.62□□□□□ -0.39
CACNA1C-202ENST00000335762 G3BP1Q13283 466 aaKnown RBP eCLIP12.62□□□□□ -0.39
CACNA1C-202ENST00000335762 RALYLQ86SE5 291 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-202ENST00000335762 API5Q9BZZ5 524 aaKnown RBP12.62□□□□□ -0.39
CACNA1C-202ENST00000335762 C1orf141Q5JVX7 400 aa12.61□□□□□ -0.39
CACNA1C-202ENST00000335762 VPS37DQ86XT2 251 aa12.61□□□□□ -0.39
CACNA1C-202ENST00000335762 PAF1Q8N7H5 531 aa12.61□□□□□ -0.39
CACNA1C-202ENST00000335762 SMARCE1Q969G3 411 aa12.61□□□□□ -0.39
CACNA1C-202ENST00000335762 C22orf23Q9BZE7 217 aa12.61□□□□□ -0.39
CACNA1C-202ENST00000335762 ERLIN2O94905 339 aa12.61□□□□□ -0.39
CACNA1C-202ENST00000335762 NGEFQ8N5V2 710 aa12.61□□□□□ -0.39
CACNA1C-202ENST00000335762 FILIP1LQ4L180 1135 aa12.6□□□□□ -0.39
CACNA1C-202ENST00000335762 WRNQ14191 1432 aaPredicted RBP eCLIP12.6□□□□□ -0.39
CACNA1C-202ENST00000335762 GOLGA6L10A6NI86 522 aa12.6□□□□□ -0.39
CACNA1C-202ENST00000335762 EIF2S2P20042 333 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-202ENST00000335762 BRMS1Q9HCU9 246 aa12.6□□□□□ -0.39
CACNA1C-202ENST00000335762 LETM1O95202 739 aaPredicted RBP12.6□□□□□ -0.39
CACNA1C-202ENST00000335762 SMC2O95347 1197 aa12.6□□□□□ -0.39
CACNA1C-202ENST00000335762 USP8P40818 1118 aa12.6□□□□□ -0.39
CACNA1C-202ENST00000335762 KIF15Q9NS87 1388 aa12.6□□□□□ -0.39
CACNA1C-202ENST00000335762 RBM10P98175 930 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-202ENST00000335762 DZIP1LQ8IYY4 767 aaKnown RBP12.6□□□□□ -0.39
CACNA1C-202ENST00000335762 ANKRD62A6NC57 917 aa12.59□□□□□ -0.39
CACNA1C-202ENST00000335762 MBD3O95983 291 aa12.59□□□□□ -0.39
CACNA1C-202ENST00000335762 L3MBTL2Q969R5 705 aa12.59□□□□□ -0.39
CACNA1C-202ENST00000335762 XBP1P17861 261 aa12.59□□□□□ -0.39
CACNA1C-202ENST00000335762 TTC5Q8N0Z6 440 aa12.59□□□□□ -0.39
CACNA1C-202ENST00000335762 FMNL2Q96PY5 1086 aa12.59□□□□□ -0.39
CACNA1C-202ENST00000335762 INCENPQ9NQS7 918 aa12.59□□□□□ -0.39
CACNA1C-202ENST00000335762 ERC2O15083 957 aa12.58□□□□□ -0.39
CACNA1C-202ENST00000335762 TAF3Q5VWG9 929 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms