RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 SCLT1Q96NL6 688 aa15.55■□□□□ 0.08
KPNA4-201ENST00000334256 TRIM29Q14134 588 aa15.54■□□□□ 0.08
KPNA4-201ENST00000334256 ERICH2A1L162 156 aa15.54■□□□□ 0.08
KPNA4-201ENST00000334256 HMGN5P82970 282 aaKnown RBP15.54■□□□□ 0.08
KPNA4-201ENST00000334256 RBM42Q9BTD8 480 aaKnown RBP15.54■□□□□ 0.08
KPNA4-201ENST00000334256 TTLL5Q6EMB2 1281 aa15.54■□□□□ 0.08
KPNA4-201ENST00000334256 BCCIPQ9P287 314 aaKnown RBP eCLIP15.53■□□□□ 0.081e-33■■□□□ 11.8
KPNA4-201ENST00000334256 UQCRHP07919 91 aa15.53■□□□□ 0.08
KPNA4-201ENST00000334256 BIN2Q9UBW5 565 aaPredicted RBP15.52■□□□□ 0.08
KPNA4-201ENST00000334256 MS4A1P11836 297 aa15.52■□□□□ 0.07
KPNA4-201ENST00000334256 TEFQ10587 303 aa15.52■□□□□ 0.07
KPNA4-201ENST00000334256 AIMP1Q12904 312 aaKnown RBP15.51■□□□□ 0.07
KPNA4-201ENST00000334256 CCDC47Q96A33 483 aaKnown RBP15.51■□□□□ 0.07
KPNA4-201ENST00000334256 RBM25P49756 843 aaKnown RBP15.5■□□□□ 0.07
KPNA4-201ENST00000334256 CIZ1Q9ULV3 898 aaPredicted RBP15.5■□□□□ 0.07
KPNA4-201ENST00000334256 ELL2O00472 640 aaPredicted RBP15.5■□□□□ 0.07
KPNA4-201ENST00000334256 ZHX3Q9H4I2 956 aa15.5■□□□□ 0.07
KPNA4-201ENST00000334256 UQCRHLA0A096LP55 91 aa15.5■□□□□ 0.07
KPNA4-201ENST00000334256 GOLGA6L3A6NEY3 463 aa15.5■□□□□ 0.07
KPNA4-201ENST00000334256 GBP4Q96PP9 640 aa15.49■□□□□ 0.07
KPNA4-201ENST00000334256 FAM13BQ9NYF5 915 aa15.49■□□□□ 0.07
KPNA4-201ENST00000334256 RBM19Q9Y4C8 960 aaKnown RBP15.49■□□□□ 0.07
KPNA4-201ENST00000334256 WASHC2AQ641Q2 1341 aa15.48■□□□□ 0.07
KPNA4-201ENST00000334256 C9orf78Q9NZ63 289 aaPredicted RBP15.48■□□□□ 0.07
KPNA4-201ENST00000334256 KIF16BQ96L93 1317 aa15.48■□□□□ 0.07
KPNA4-201ENST00000334256 TPM1P09493 284 aa15.48■□□□□ 0.07
KPNA4-201ENST00000334256 PDCL3Q9H2J4 239 aa15.48■□□□□ 0.07
KPNA4-201ENST00000334256 BICDL1Q6ZP65 573 aa15.47■□□□□ 0.07
KPNA4-201ENST00000334256 HSP90AB4PQ58FF6 505 aa15.47■□□□□ 0.07
KPNA4-201ENST00000334256 OFD1O75665 1012 aa15.46■□□□□ 0.07
KPNA4-201ENST00000334256 NOP2P46087 812 aaKnown RBP15.46■□□□□ 0.07
KPNA4-201ENST00000334256 PDE3BQ13370 1112 aa15.46■□□□□ 0.07
KPNA4-201ENST00000334256 TMF1P82094 1093 aa15.45■□□□□ 0.06
KPNA4-201ENST00000334256 SART3Q15020 963 aaKnown RBP15.45■□□□□ 0.06
KPNA4-201ENST00000334256 CCDC70Q6NSX1 233 aa15.45■□□□□ 0.06
KPNA4-201ENST00000334256 CALD1Q05682 793 aaKnown RBP15.44■□□□□ 0.06
KPNA4-201ENST00000334256 NEXNQ0ZGT2 675 aa15.44■□□□□ 0.06
KPNA4-201ENST00000334256 SYAP1Q96A49 352 aaPredicted RBP15.44■□□□□ 0.06
KPNA4-201ENST00000334256 IL27Q8NEV9 243 aa15.44■□□□□ 0.06
KPNA4-201ENST00000334256 TRDNQ13061 729 aa15.44■□□□□ 0.06
KPNA4-201ENST00000334256 RUFY1Q96T51 708 aa15.44■□□□□ 0.06
KPNA4-201ENST00000334256 SYCP1Q15431 976 aa15.44■□□□□ 0.06
KPNA4-201ENST00000334256 H0YHG0 523 aa15.43■□□□□ 0.06
KPNA4-201ENST00000334256 NEUROD6Q96NK8 337 aa15.43■□□□□ 0.06
KPNA4-201ENST00000334256 TRMT1LQ7Z2T5 733 aaKnown RBP15.42■□□□□ 0.06
KPNA4-201ENST00000334256 LMOD3Q0VAK6 560 aa15.42■□□□□ 0.06
KPNA4-201ENST00000334256 DDX54Q8TDD1 881 aaKnown RBP15.42■□□□□ 0.06
KPNA4-201ENST00000334256 BEGAINQ9BUH8 593 aa15.42■□□□□ 0.06
KPNA4-201ENST00000334256 ATXN8OSP0DMR3 200 aa15.41■□□□□ 0.06
KPNA4-201ENST00000334256 KRT18P05783 430 aaKnown RBP15.41■□□□□ 0.06
KPNA4-201ENST00000334256 IPO7O95373 1038 aaKnown RBP15.41■□□□□ 0.06
KPNA4-201ENST00000334256 GRIPAP1Q4V328 841 aa15.41■□□□□ 0.06
KPNA4-201ENST00000334256 IPO9Q96P70 1041 aaKnown RBP15.41■□□□□ 0.06
KPNA4-201ENST00000334256 GOLGA6L19H0YKK7 550 aa15.4■□□□□ 0.06
KPNA4-201ENST00000334256 IPO8O15397 1037 aaKnown RBP15.4■□□□□ 0.06
KPNA4-201ENST00000334256 GPS2Q13227 327 aa15.4■□□□□ 0.06
KPNA4-201ENST00000334256 COMMD10Q9Y6G5 202 aa15.4■□□□□ 0.06
KPNA4-201ENST00000334256 WASHC2CQ9Y4E1 1318 aa15.4■□□□□ 0.06
KPNA4-201ENST00000334256 NLRP2Q9NX02 1062 aa15.4■□□□□ 0.06
KPNA4-201ENST00000334256 CPLX1O14810 134 aa15.4■□□□□ 0.06
KPNA4-201ENST00000334256 WASHC4Q2M389 1173 aa15.4■□□□□ 0.06
KPNA4-201ENST00000334256 ZNF710Q8N1W2 664 aa15.39■□□□□ 0.05
KPNA4-201ENST00000334256 CCDC191Q8NCU4 936 aa15.39■□□□□ 0.05
KPNA4-201ENST00000334256 CLUAP1Q96AJ1 413 aa15.39■□□□□ 0.05
KPNA4-201ENST00000334256 EIF4G1Q04637 1599 aaKnown RBP15.38■□□□□ 0.05
KPNA4-201ENST00000334256 SMC4Q9NTJ3 1288 aa15.38■□□□□ 0.05
KPNA4-201ENST00000334256 PUS7Q96PZ0 661 aaKnown RBP15.38■□□□□ 0.05
KPNA4-201ENST00000334256 CPLX2Q6PUV4 134 aaKnown RBP15.38■□□□□ 0.05
KPNA4-201ENST00000334256 ATP2B1P20020 1258 aa15.38■□□□□ 0.05
KPNA4-201ENST00000334256 BECN2A8MW95 431 aa15.37■□□□□ 0.05
KPNA4-201ENST00000334256 SEPT11Q9NVA2 429 aaKnown RBP15.37■□□□□ 0.05
KPNA4-201ENST00000334256 CDK5RAP3Q96JB5 506 aa15.37■□□□□ 0.05
KPNA4-201ENST00000334256 HDAC5Q9UQL6 1122 aa15.37■□□□□ 0.05
KPNA4-201ENST00000334256 ADAMTS2O95450 1211 aa15.36■□□□□ 0.05
KPNA4-201ENST00000334256 CCDC146Q8IYE0 955 aa15.36■□□□□ 0.05
KPNA4-201ENST00000334256 RDXP35241 583 aaKnown RBP15.36■□□□□ 0.05
KPNA4-201ENST00000334256 KIF3BO15066 747 aa15.36■□□□□ 0.05
KPNA4-201ENST00000334256 HMMRO75330 724 aa15.36■□□□□ 0.05
KPNA4-201ENST00000334256 SSR1P43307 286 aaKnown RBP15.36■□□□□ 0.05
KPNA4-201ENST00000334256 HOMER2Q9NSB8 354 aa15.36■□□□□ 0.05
KPNA4-201ENST00000334256 RIC3Q7Z5B4 369 aa15.35■□□□□ 0.05
KPNA4-201ENST00000334256 SEPT7Q16181 437 aaKnown RBP15.35■□□□□ 0.05
KPNA4-201ENST00000334256 RRP7AQ9Y3A4 280 aaKnown RBP15.35■□□□□ 0.05
KPNA4-201ENST00000334256 TEX35Q5T0J7 233 aa15.35■□□□□ 0.05
KPNA4-201ENST00000334256 ANKRD20A12PQ8NF67 263 aa15.34■□□□□ 0.05
KPNA4-201ENST00000334256 RAPGEF4Q8WZA2 1011 aa15.34■□□□□ 0.05
KPNA4-201ENST00000334256 LRSAM1Q6UWE0 723 aa15.34■□□□□ 0.05
KPNA4-201ENST00000334256 PIBF1Q8WXW3 757 aa15.34■□□□□ 0.05
KPNA4-201ENST00000334256 TSPYL1Q9H0U9 437 aa15.34■□□□□ 0.05
KPNA4-201ENST00000334256 MRPS9P82933 396 aaKnown RBP15.34■□□□□ 0.05
KPNA4-201ENST00000334256 KIF3AQ9Y496 699 aa15.34■□□□□ 0.05
KPNA4-201ENST00000334256 TRAK1Q9UPV9 953 aa15.33■□□□□ 0.05
KPNA4-201ENST00000334256 BIRC2Q13490 618 aa15.33■□□□□ 0.04
KPNA4-201ENST00000334256 LIG1P18858 919 aa15.33■□□□□ 0.04
KPNA4-201ENST00000334256 KIF6Q6ZMV9 814 aa15.33■□□□□ 0.04
KPNA4-201ENST00000334256 LRRFIP1Q32MZ4 808 aaKnown RBP15.33■□□□□ 0.04
KPNA4-201ENST00000334256 ZNF354CQ86Y25 554 aa15.32■□□□□ 0.04
KPNA4-201ENST00000334256 CHMP4AQ9BY43 222 aa15.32■□□□□ 0.04
KPNA4-201ENST00000334256 RGS22Q8NE09 1264 aa15.32■□□□□ 0.04
KPNA4-201ENST00000334256 ENOX2Q16206 610 aaKnown RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms