RNA–Protein interactions for RNA: ENST00000333188.9

COPB2-201, Transcript of coatomer protein complex subunit beta 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB2, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-201ENST00000333188 PPP2R1AP30153 589 aa11.97□□□□□ -0.49
COPB2-201ENST00000333188 PER1O15534 1290 aaPredicted RBP11.96□□□□□ -0.49
COPB2-201ENST00000333188 C14orf37Q86TY3 774 aa11.96□□□□□ -0.49
COPB2-201ENST00000333188 SLC24A1O60721 1099 aa11.96□□□□□ -0.49
COPB2-201ENST00000333188 CANXP27824 592 aaKnown RBP11.96□□□□□ -0.49
COPB2-201ENST00000333188 TSHZ2Q9NRE2 1034 aa11.95□□□□□ -0.5
COPB2-201ENST00000333188 NUDCQ9Y266 331 aa11.95□□□□□ -0.5
COPB2-201ENST00000333188 U2AF1L5P0DN76 240 aaPredicted RBP11.95□□□□□ -0.5
COPB2-201ENST00000333188 U2AF1Q01081 240 aaKnown RBP eCLIP11.95□□□□□ -0.5
COPB2-201ENST00000333188 ATP10AO60312 1499 aa11.95□□□□□ -0.5
COPB2-201ENST00000333188 TSPOAP1O95153 1857 aa11.95□□□□□ -0.5
COPB2-201ENST00000333188 EIF3AQ14152 1382 aaKnown RBP11.95□□□□□ -0.5
COPB2-201ENST00000333188 CROCC2H7BZ55 1655 aa11.94□□□□□ -0.5
COPB2-201ENST00000333188 NCKAP5LQ9HCH0 1330 aa11.94□□□□□ -0.5
COPB2-201ENST00000333188 NPM2Q86SE8 214 aaKnown RBP11.94□□□□□ -0.5
COPB2-201ENST00000333188 CARD14Q9BXL6 1004 aa11.94□□□□□ -0.5
COPB2-201ENST00000333188 LAS1LQ9Y4W2 734 aaKnown RBP11.94□□□□□ -0.5
COPB2-201ENST00000333188 BCL2L13Q9BXK5 485 aa11.93□□□□□ -0.5
COPB2-201ENST00000333188 RTEL1-TNFRSF6BF6WH68 1400 aa11.93□□□□□ -0.5
COPB2-201ENST00000333188 NPATQ14207 1427 aa11.93□□□□□ -0.5
COPB2-201ENST00000333188 FRAT1Q92837 279 aaPredicted RBP11.93□□□□□ -0.5
COPB2-201ENST00000333188 RCAN3Q9UKA8 241 aa11.93□□□□□ -0.5
COPB2-201ENST00000333188 BCORL1Q5H9F3 1711 aa11.93□□□□□ -0.5
COPB2-201ENST00000333188 ZFYVE16Q7Z3T8 1539 aa11.92□□□□□ -0.5
COPB2-201ENST00000333188 MTHFSP49914 203 aa11.92□□□□□ -0.5
COPB2-201ENST00000333188 SKAP1Q86WV1 359 aa11.92□□□□□ -0.5
COPB2-201ENST00000333188 CABP1Q9NZU7 370 aa11.92□□□□□ -0.5
COPB2-201ENST00000333188 POGZQ7Z3K3 1410 aa11.92□□□□□ -0.5
COPB2-201ENST00000333188 UHRF1BP1Q6BDS2 1440 aa11.92□□□□□ -0.5
COPB2-201ENST00000333188 EXOC6Q8TAG9 804 aa11.91□□□□□ -0.5
COPB2-201ENST00000333188 C14orf93Q9H972 538 aaKnown RBP11.91□□□□□ -0.5
COPB2-201ENST00000333188 MAST1Q9Y2H9 1570 aa11.91□□□□□ -0.5
COPB2-201ENST00000333188 EVC2Q86UK5 1308 aa11.9□□□□□ -0.5
COPB2-201ENST00000333188 PPP4R2Q9NY27 417 aa11.9□□□□□ -0.5
COPB2-201ENST00000333188 SLC52A1Q9NWF4 448 aa11.9□□□□□ -0.51
COPB2-201ENST00000333188 AMER1Q5JTC6 1135 aaPredicted RBP11.89□□□□□ -0.51
COPB2-201ENST00000333188 NUTM2GQ5VZR2 741 aa11.89□□□□□ -0.51
COPB2-201ENST00000333188 LMOD2Q6P5Q4 547 aa11.89□□□□□ -0.51
COPB2-201ENST00000333188 PRDM15P57071 1507 aaPredicted RBP11.89□□□□□ -0.51
COPB2-201ENST00000333188 CDK19Q9BWU1 502 aa11.88□□□□□ -0.51
COPB2-201ENST00000333188 ERICH6Q7L0X2 663 aa11.87□□□□□ -0.51
COPB2-201ENST00000333188 PMFBP1Q8TBY8 1022 aa11.87□□□□□ -0.51
COPB2-201ENST00000333188 CLUAP1Q96AJ1 413 aa11.87□□□□□ -0.51
COPB2-201ENST00000333188 KDM5DQ9BY66 1539 aa11.87□□□□□ -0.51
COPB2-201ENST00000333188 BRD4O60885 1362 aaPredicted RBP11.87□□□□□ -0.51
COPB2-201ENST00000333188 SCAF11Q99590 1463 aaKnown RBP11.86□□□□□ -0.51
COPB2-201ENST00000333188 KDM5CP41229 1560 aa11.86□□□□□ -0.51
COPB2-201ENST00000333188 CFAP53Q96M91 514 aa11.86□□□□□ -0.51
COPB2-201ENST00000333188 PAK3O75914 559 aaPredicted RBP11.85□□□□□ -0.51
COPB2-201ENST00000333188 HMOX1P09601 288 aa11.85□□□□□ -0.51
COPB2-201ENST00000333188 ZRANB1Q9UGI0 708 aa11.85□□□□□ -0.51
COPB2-201ENST00000333188 RBM19Q9Y4C8 960 aaKnown RBP11.85□□□□□ -0.51
COPB2-201ENST00000333188 NSD3Q9BZ95 1437 aa11.85□□□□□ -0.51
COPB2-201ENST00000333188 TCERG1O14776 1098 aaKnown RBP11.85□□□□□ -0.51
COPB2-201ENST00000333188 HDGFL2Q7Z4V5 671 aaPredicted RBP11.85□□□□□ -0.51
COPB2-201ENST00000333188 CGNL1Q0VF96 1302 aa11.84□□□□□ -0.51
COPB2-201ENST00000333188 ELL2O00472 640 aaPredicted RBP11.84□□□□□ -0.51
COPB2-201ENST00000333188 GOLGA2Q08379 1002 aa11.84□□□□□ -0.51
COPB2-201ENST00000333188 C20orf194Q5TEA3 1177 aa11.84□□□□□ -0.51
COPB2-201ENST00000333188 TERF2IPQ9NYB0 399 aa11.83□□□□□ -0.52
COPB2-201ENST00000333188 MAGI2Q86UL8 1455 aa11.82□□□□□ -0.52
COPB2-201ENST00000333188 RRS1Q15050 365 aaKnown RBP11.82□□□□□ -0.52
COPB2-201ENST00000333188 NEFMP07197 916 aa11.82□□□□□ -0.52
COPB2-201ENST00000333188 RGS3P49796 1198 aa11.82□□□□□ -0.52
COPB2-201ENST00000333188 STAC3Q96MF2 364 aa11.82□□□□□ -0.52
COPB2-201ENST00000333188 CRBNQ96SW2 442 aa11.82□□□□□ -0.52
COPB2-201ENST00000333188 ABCA9Q8IUA7 1624 aa11.81□□□□□ -0.52
COPB2-201ENST00000333188 BCAR3O75815 825 aa11.81□□□□□ -0.52
COPB2-201ENST00000333188 RRP1P56182 461 aaKnown RBP11.81□□□□□ -0.52
COPB2-201ENST00000333188 LTV1Q96GA3 475 aaPredicted RBP11.81□□□□□ -0.52
COPB2-201ENST00000333188 SPINK5Q9NQ38 1064 aaPredicted RBP11.81□□□□□ -0.52
COPB2-201ENST00000333188 DMRT2Q9Y5R5 561 aa11.81□□□□□ -0.52
COPB2-201ENST00000333188 GPRASP1Q5JY77 1395 aa11.81□□□□□ -0.52
COPB2-201ENST00000333188 CLTCL1P53675 1640 aa11.81□□□□□ -0.52
COPB2-201ENST00000333188 PLXNC1O60486 1568 aa11.81□□□□□ -0.52
COPB2-201ENST00000333188 E9PCH4 1651 aa11.81□□□□□ -0.52
COPB2-201ENST00000333188 TCP11L2Q8N4U5 519 aa11.81□□□□□ -0.52
COPB2-201ENST00000333188 EID1Q9Y6B2 187 aa11.81□□□□□ -0.52
COPB2-201ENST00000333188 PARD3Q8TEW0 1356 aa11.8□□□□□ -0.52
COPB2-201ENST00000333188 COL17A1Q9UMD9 1497 aaPredicted RBP11.8□□□□□ -0.52
COPB2-201ENST00000333188 PTPRTO14522 1441 aa11.8□□□□□ -0.52
COPB2-201ENST00000333188 MAPK8IP3Q9UPT6 1336 aa11.8□□□□□ -0.52
COPB2-201ENST00000333188 IQGAP3Q86VI3 1631 aa11.8□□□□□ -0.52
COPB2-201ENST00000333188 NME9Q86XW9 330 aa11.79□□□□□ -0.52
COPB2-201ENST00000333188 ZMYM3Q14202 1370 aa11.79□□□□□ -0.52
COPB2-201ENST00000333188 NGDNQ8NEJ9 315 aaKnown RBP11.79□□□□□ -0.52
COPB2-201ENST00000333188 TSR2Q969E8 191 aaKnown RBP11.79□□□□□ -0.52
COPB2-201ENST00000333188 UNC13BO14795 1591 aa11.79□□□□□ -0.52
COPB2-201ENST00000333188 RPGRIP1LQ68CZ1 1315 aa11.79□□□□□ -0.52
COPB2-201ENST00000333188 HDGFP51858 240 aaKnown RBP11.78□□□□□ -0.52
COPB2-201ENST00000333188 THUMPD2Q9BTF0 503 aaKnown RBP11.78□□□□□ -0.52
COPB2-201ENST00000333188 MLH3Q9UHC1 1453 aa11.78□□□□□ -0.52
COPB2-201ENST00000333188 PLEKHH1Q9ULM0 1364 aa11.78□□□□□ -0.52
COPB2-201ENST00000333188 KIDINS220Q9ULH0 1771 aa11.78□□□□□ -0.52
COPB2-201ENST00000333188 XPCQ01831 940 aaPredicted RBP11.78□□□□□ -0.52
COPB2-201ENST00000333188 RIMBP3CA6NJZ7 1639 aa11.76□□□□□ -0.53
COPB2-201ENST00000333188 RIMBP3BA6NNM3 1639 aa11.76□□□□□ -0.53
COPB2-201ENST00000333188 RIMBP3Q9UFD9 1639 aa11.76□□□□□ -0.53
COPB2-201ENST00000333188 LTKP29376 864 aa11.76□□□□□ -0.53
COPB2-201ENST00000333188 EMILIN1Q9Y6C2 1016 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms