RNA–Protein interactions for RNA: ENST00000332118.10

SRPRA-201, Transcript of SRP receptor subunit alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPRA, Length 3,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-201ENST00000332118 PIK3C2GO75747 1445 aa18.82■□□□□ 0.6
SRPRA-201ENST00000332118 PARD3Q8TEW0 1356 aa18.82■□□□□ 0.6
SRPRA-201ENST00000332118 DISP3Q9P2K9 1392 aa18.81■□□□□ 0.6
SRPRA-201ENST00000332118 SBNO2Q9Y2G9 1366 aa18.81■□□□□ 0.6
SRPRA-201ENST00000332118 NEXMIFQ5QGS0 1516 aa18.81■□□□□ 0.6
SRPRA-201ENST00000332118 KDM5AP29375 1690 aaKnown RBP18.8■□□□□ 0.6
SRPRA-201ENST00000332118 RGL3Q3MIN7 710 aa18.8■□□□□ 0.6
SRPRA-201ENST00000332118 ZFYVE9O95405 1425 aa18.78■□□□□ 0.6
SRPRA-201ENST00000332118 LRPPRCP42704 1394 aaKnown RBP18.78■□□□□ 0.6
SRPRA-201ENST00000332118 YEATS2Q9ULM3 1422 aa18.78■□□□□ 0.6
SRPRA-201ENST00000332118 PER1O15534 1290 aaPredicted RBP18.78■□□□□ 0.6
SRPRA-201ENST00000332118 CCDC184Q52MB2 194 aa18.78■□□□□ 0.6
SRPRA-201ENST00000332118 RPGRIP1LQ68CZ1 1315 aa18.78■□□□□ 0.6
SRPRA-201ENST00000332118 BRD4O60885 1362 aaPredicted RBP18.77■□□□□ 0.6
SRPRA-201ENST00000332118 EIF3AQ14152 1382 aaKnown RBP18.77■□□□□ 0.59
SRPRA-201ENST00000332118 TMEM131LA2VDJ0 1609 aa18.76■□□□□ 0.59
SRPRA-201ENST00000332118 RALBP1Q15311 655 aa18.76■□□□□ 0.59
SRPRA-201ENST00000332118 ARHGEF40Q8TER5 1519 aa18.76■□□□□ 0.59
SRPRA-201ENST00000332118 SUPT16HQ9Y5B9 1047 aaKnown RBP18.75■□□□□ 0.59
SRPRA-201ENST00000332118 ZBED9Q6R2W3 1325 aa18.75■□□□□ 0.59
SRPRA-201ENST00000332118 SLC24A1O60721 1099 aa18.73■□□□□ 0.59
SRPRA-201ENST00000332118 NPC1L1Q9UHC9 1359 aa18.72■□□□□ 0.59
SRPRA-201ENST00000332118 TMF1P82094 1093 aa18.72■□□□□ 0.59
SRPRA-201ENST00000332118 MYBBP1AQ9BQG0 1328 aaKnown RBP18.72■□□□□ 0.59
SRPRA-201ENST00000332118 RAPGEF3O95398 923 aa18.71■□□□□ 0.59
SRPRA-201ENST00000332118 PPP6R1Q9UPN7 881 aa18.71■□□□□ 0.59
SRPRA-201ENST00000332118 ARHGEF28Q8N1W1 1705 aaKnown RBP18.71■□□□□ 0.59
SRPRA-201ENST00000332118 QRICH2Q9H0J4 1663 aa18.71■□□□□ 0.59
SRPRA-201ENST00000332118 SPATA31D1Q6ZQQ2 1576 aa18.71■□□□□ 0.59
SRPRA-201ENST00000332118 ERVK-7P63135 1459 aa18.71■□□□□ 0.59
SRPRA-201ENST00000332118 USP32Q8NFA0 1604 aa18.7■□□□□ 0.58
SRPRA-201ENST00000332118 MRS2Q9HD23 443 aa18.7■□□□□ 0.58
SRPRA-201ENST00000332118 CYB5RLQ6IPT4 315 aa18.68■□□□□ 0.58
SRPRA-201ENST00000332118 TSPOAP1O95153 1857 aa18.68■□□□□ 0.58
SRPRA-201ENST00000332118 MYO5BQ9ULV0 1848 aa18.68■□□□□ 0.58
SRPRA-201ENST00000332118 ADGRF5Q8IZF2 1346 aa18.67■□□□□ 0.58
SRPRA-201ENST00000332118 PNISRQ8TF01 805 aaKnown RBP18.67■□□□□ 0.58
SRPRA-201ENST00000332118 CDCA8Q53HL2 280 aa18.65■□□□□ 0.58
SRPRA-201ENST00000332118 MYT1LQ9UL68 1186 aa18.65■□□□□ 0.58
SRPRA-201ENST00000332118 ASXL1Q8IXJ9 1541 aa18.64■□□□□ 0.58
SRPRA-201ENST00000332118 HNRNPUQ00839 825 aaKnown RBP eCLIP18.64■□□□□ 0.57
SRPRA-201ENST00000332118 C14orf93Q9H972 538 aaKnown RBP18.64■□□□□ 0.57
SRPRA-201ENST00000332118 CLTCQ00610 1675 aaKnown RBP18.64■□□□□ 0.57
SRPRA-201ENST00000332118 SMG6Q86US8 1419 aaKnown RBP18.63■□□□□ 0.57
SRPRA-201ENST00000332118 SETD1AO15047 1707 aaKnown RBP18.63■□□□□ 0.57
SRPRA-201ENST00000332118 BLMP54132 1417 aaPredicted RBP18.62■□□□□ 0.57
SRPRA-201ENST00000332118 SLC52A1Q9NWF4 448 aa18.61■□□□□ 0.57
SRPRA-201ENST00000332118 FAM69CQ0P6D2 419 aa18.61■□□□□ 0.57
SRPRA-201ENST00000332118 CFAP65Q6ZU64 1925 aaKnown RBP18.6■□□□□ 0.57
SRPRA-201ENST00000332118 NLRP13Q86W25 1043 aa18.6■□□□□ 0.57
SRPRA-201ENST00000332118 PUS7Q96PZ0 661 aaKnown RBP18.6■□□□□ 0.57
SRPRA-201ENST00000332118 GGT6Q6P531 493 aa18.59■□□□□ 0.57
SRPRA-201ENST00000332118 ERICH6BQ5W0A0 696 aa18.58■□□□□ 0.57
SRPRA-201ENST00000332118 CFAP70Q5T0N1 1121 aa18.57■□□□□ 0.56
SRPRA-201ENST00000332118 PANK3Q9H999 370 aa18.56■□□□□ 0.56
SRPRA-201ENST00000332118 AMER1Q5JTC6 1135 aaPredicted RBP18.54■□□□□ 0.56
SRPRA-201ENST00000332118 RNF123Q5XPI4 1314 aa18.54■□□□□ 0.56
SRPRA-201ENST00000332118 TULP4Q9NRJ4 1543 aa18.53■□□□□ 0.56
SRPRA-201ENST00000332118 FAM9BQ8IZU0 186 aa18.53■□□□□ 0.56
SRPRA-201ENST00000332118 DLC1Q96QB1 1528 aa18.53■□□□□ 0.56
SRPRA-201ENST00000332118 VGFO15240 615 aaPredicted RBP18.51■□□□□ 0.55
SRPRA-201ENST00000332118 PTPRMP28827 1452 aa18.51■□□□□ 0.55
SRPRA-201ENST00000332118 KNDC1Q76NI1 1749 aa18.5■□□□□ 0.55
SRPRA-201ENST00000332118 ALKQ9UM73 1620 aa18.5■□□□□ 0.55
SRPRA-201ENST00000332118 TMC1Q8TDI8 760 aa18.5■□□□□ 0.55
SRPRA-201ENST00000332118 POLR3GLQ9BT43 218 aa18.5■□□□□ 0.55
SRPRA-201ENST00000332118 NRXN3Q9Y4C0 1643 aa18.5■□□□□ 0.55
SRPRA-201ENST00000332118 A2ML1A8K2U0 1454 aa18.49■□□□□ 0.55
SRPRA-201ENST00000332118 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
SRPRA-201ENST00000332118 IDI1Q13907 227 aa18.49■□□□□ 0.55
SRPRA-201ENST00000332118 BCANQ96GW7 911 aa18.47■□□□□ 0.55
SRPRA-201ENST00000332118 ANKRD26Q9UPS8 1709 aa18.46■□□□□ 0.55
SRPRA-201ENST00000332118 FKBP8Q14318 412 aa18.46■□□□□ 0.54
SRPRA-201ENST00000332118 NINLQ9Y2I6 1382 aa18.45■□□□□ 0.54
SRPRA-201ENST00000332118 NEFLP07196 543 aa18.44■□□□□ 0.54
SRPRA-201ENST00000332118 NUDCQ9Y266 331 aa18.44■□□□□ 0.54
SRPRA-201ENST00000332118 SHPRHQ149N8 1683 aa18.44■□□□□ 0.54
SRPRA-201ENST00000332118 UBR1Q8IWV7 1749 aa18.43■□□□□ 0.54
SRPRA-201ENST00000332118 PDE3BQ13370 1112 aa18.41■□□□□ 0.54
SRPRA-201ENST00000332118 KNSTRNQ9Y448 316 aa18.41■□□□□ 0.54
SRPRA-201ENST00000332118 PPP2R1AP30153 589 aa18.4■□□□□ 0.54
SRPRA-201ENST00000332118 MED14O60244 1454 aa18.39■□□□□ 0.54
SRPRA-201ENST00000332118 YTHDC2Q9H6S0 1430 aaKnown RBP18.39■□□□□ 0.54
SRPRA-201ENST00000332118 NSD2O96028 1365 aa18.39■□□□□ 0.53
SRPRA-201ENST00000332118 CARD14Q9BXL6 1004 aa18.38■□□□□ 0.53
SRPRA-201ENST00000332118 ANKRD36BQ8N2N9 1353 aa18.37■□□□□ 0.53
SRPRA-201ENST00000332118 POLR3AO14802 1390 aaPredicted RBP18.36■□□□□ 0.53
SRPRA-201ENST00000332118 CPS1P31327 1500 aa18.36■□□□□ 0.53
SRPRA-201ENST00000332118 CC2D1BQ5T0F9 858 aaKnown RBP18.36■□□□□ 0.53
SRPRA-201ENST00000332118 TECPR2O15040 1411 aa18.36■□□□□ 0.53
SRPRA-201ENST00000332118 RIMS2Q9UQ26 1411 aa18.34■□□□□ 0.53
SRPRA-201ENST00000332118 CHGAP10645 457 aaKnown RBP18.34■□□□□ 0.53
SRPRA-201ENST00000332118 CD163L1Q9NR16 1453 aa18.34■□□□□ 0.53
SRPRA-201ENST00000332118 ZMYM3Q14202 1370 aa18.33■□□□□ 0.53
SRPRA-201ENST00000332118 FBXO31Q5XUX0 539 aaPredicted RBP18.33■□□□□ 0.52
SRPRA-201ENST00000332118 EVC2Q86UK5 1308 aa18.33■□□□□ 0.52
SRPRA-201ENST00000332118 ZNF521Q96K83 1311 aa18.32■□□□□ 0.52
SRPRA-201ENST00000332118 ADGRB2O60241 1585 aa18.32■□□□□ 0.52
SRPRA-201ENST00000332118 KIF20BQ96Q89 1820 aa18.32■□□□□ 0.52
SRPRA-201ENST00000332118 NSD3Q9BZ95 1437 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms