RNA–Protein interactions for RNA: ENST00000331968.9

PRKD1-201, Transcript of protein kinase D1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRKD1, Length 3,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD1-201ENST00000331968 ADGRL1O94910 1474 aa17.42■□□□□ 0.38
PRKD1-201ENST00000331968 WAPLQ7Z5K2 1190 aa17.41■□□□□ 0.38
PRKD1-201ENST00000331968 SLC26A8Q96RN1 970 aa17.41■□□□□ 0.38
PRKD1-201ENST00000331968 GZF1Q9H116 711 aaPredicted RBP17.41■□□□□ 0.38
PRKD1-201ENST00000331968 FANCAO15360 1455 aa17.41■□□□□ 0.38
PRKD1-201ENST00000331968 PZPP20742 1482 aa17.41■□□□□ 0.38
PRKD1-201ENST00000331968 DISP3Q9P2K9 1392 aa17.4■□□□□ 0.38
PRKD1-201ENST00000331968 PPP2R1AP30153 589 aa17.4■□□□□ 0.38
PRKD1-201ENST00000331968 A0A0G2JS52 829 aa17.4■□□□□ 0.38
PRKD1-201ENST00000331968 MTHFSP49914 203 aa17.4■□□□□ 0.38
PRKD1-201ENST00000331968 GOLGA2Q08379 1002 aa17.4■□□□□ 0.38
PRKD1-201ENST00000331968 DDRGK1Q96HY6 314 aa17.4■□□□□ 0.38
PRKD1-201ENST00000331968 TCOF1Q13428 1488 aaKnown RBP17.39■□□□□ 0.38
PRKD1-201ENST00000331968 ERBINQ96RT1 1412 aa17.39■□□□□ 0.37
PRKD1-201ENST00000331968 HMOX1P09601 288 aa17.38■□□□□ 0.37
PRKD1-201ENST00000331968 ASXL2Q76L83 1435 aa17.38■□□□□ 0.37
PRKD1-201ENST00000331968 FTSJ3Q8IY81 847 aaKnown RBP17.38■□□□□ 0.37
PRKD1-201ENST00000331968 HDGFL2Q7Z4V5 671 aaPredicted RBP17.37■□□□□ 0.37
PRKD1-201ENST00000331968 PRKCSHP14314 528 aaPredicted RBP17.36■□□□□ 0.37
PRKD1-201ENST00000331968 EIF3AQ14152 1382 aaKnown RBP17.35■□□□□ 0.37
PRKD1-201ENST00000331968 APBB1O00213 710 aa17.35■□□□□ 0.37
PRKD1-201ENST00000331968 HSP90AA1P07900 732 aaKnown RBP17.34■□□□□ 0.37
PRKD1-201ENST00000331968 PLCH2O75038 1416 aa17.34■□□□□ 0.37
PRKD1-201ENST00000331968 UPF2Q9HAU5 1272 aaKnown RBP17.34■□□□□ 0.37
PRKD1-201ENST00000331968 CABP1Q9NZU7 370 aa17.33■□□□□ 0.37
PRKD1-201ENST00000331968 COG6Q9Y2V7 657 aa17.33■□□□□ 0.36
PRKD1-201ENST00000331968 EVC2Q86UK5 1308 aa17.32■□□□□ 0.36
PRKD1-201ENST00000331968 PMFBP1Q8TBY8 1022 aa17.32■□□□□ 0.36
PRKD1-201ENST00000331968 NGDNQ8NEJ9 315 aaKnown RBP17.31■□□□□ 0.36
PRKD1-201ENST00000331968 TERF2IPQ9NYB0 399 aa17.31■□□□□ 0.36
PRKD1-201ENST00000331968 BCAR3O75815 825 aa17.3■□□□□ 0.36
PRKD1-201ENST00000331968 TESK2Q96S53 571 aa17.29■□□□□ 0.36
PRKD1-201ENST00000331968 C20orf194Q5TEA3 1177 aa17.28■□□□□ 0.36
PRKD1-201ENST00000331968 LRRIQ1Q96JM4 1722 aa17.28■□□□□ 0.36
PRKD1-201ENST00000331968 CGNL1Q0VF96 1302 aa17.27■□□□□ 0.36
PRKD1-201ENST00000331968 PANK1Q8TE04 598 aa17.27■□□□□ 0.35
PRKD1-201ENST00000331968 NFKBIBQ15653 356 aa17.26■□□□□ 0.35
PRKD1-201ENST00000331968 FAM135AQ9P2D6 1515 aa17.26■□□□□ 0.35
PRKD1-201ENST00000331968 TPRNQ4KMQ1 711 aa17.26■□□□□ 0.35
PRKD1-201ENST00000331968 TCP11L2Q8N4U5 519 aa17.26■□□□□ 0.35
PRKD1-201ENST00000331968 NOS1P29475 1434 aa17.26■□□□□ 0.35
PRKD1-201ENST00000331968 DNMT1P26358 1616 aaKnown RBP17.26■□□□□ 0.35
PRKD1-201ENST00000331968 TSR2Q969E8 191 aaKnown RBP17.26■□□□□ 0.35
PRKD1-201ENST00000331968 GSE1Q14687 1217 aa17.25■□□□□ 0.35
PRKD1-201ENST00000331968 DENND4BO75064 1496 aaPredicted RBP17.25■□□□□ 0.35
PRKD1-201ENST00000331968 ZNF428Q96B54 188 aa17.25■□□□□ 0.35
PRKD1-201ENST00000331968 NAP1L5Q96NT1 182 aaPredicted RBP17.25■□□□□ 0.35
PRKD1-201ENST00000331968 NCKAP5LQ9HCH0 1330 aa17.25■□□□□ 0.35
PRKD1-201ENST00000331968 CDK19Q9BWU1 502 aa17.25■□□□□ 0.35
PRKD1-201ENST00000331968 FRAT2O75474 233 aaPredicted RBP17.24■□□□□ 0.35
PRKD1-201ENST00000331968 NECTIN2Q92692 538 aa17.24■□□□□ 0.35
PRKD1-201ENST00000331968 SMC4Q9NTJ3 1288 aa17.24■□□□□ 0.35
PRKD1-201ENST00000331968 DHX29Q7Z478 1369 aaKnown RBP17.23■□□□□ 0.35
PRKD1-201ENST00000331968 ITPRIPQ8IWB1 547 aa17.23■□□□□ 0.35
PRKD1-201ENST00000331968 MBD5Q9P267 1494 aa17.23■□□□□ 0.35
PRKD1-201ENST00000331968 EID1Q9Y6B2 187 aa17.23■□□□□ 0.35
PRKD1-201ENST00000331968 RRS1Q15050 365 aaKnown RBP17.22■□□□□ 0.35
PRKD1-201ENST00000331968 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
PRKD1-201ENST00000331968 HDGFP51858 240 aaKnown RBP17.22■□□□□ 0.35
PRKD1-201ENST00000331968 BACH2Q9BYV9 841 aa17.21■□□□□ 0.35
PRKD1-201ENST00000331968 BRD4O60885 1362 aaPredicted RBP17.21■□□□□ 0.35
PRKD1-201ENST00000331968 ABCC10Q5T3U5 1492 aa17.21■□□□□ 0.35
PRKD1-201ENST00000331968 TEX14Q8IWB6 1497 aa17.21■□□□□ 0.35
PRKD1-201ENST00000331968 RIPK4P57078 832 aa17.2■□□□□ 0.34
PRKD1-201ENST00000331968 BECN1Q14457 450 aa17.2■□□□□ 0.34
PRKD1-201ENST00000331968 WDR7Q9Y4E6 1490 aa17.2■□□□□ 0.34
PRKD1-201ENST00000331968 CHD1O14646 1710 aa17.19■□□□□ 0.34
PRKD1-201ENST00000331968 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.19■□□□□ 0.34
PRKD1-201ENST00000331968 ABCC2Q92887 1545 aa17.19■□□□□ 0.34
PRKD1-201ENST00000331968 XPCQ01831 940 aaPredicted RBP17.19■□□□□ 0.34
PRKD1-201ENST00000331968 CARD14Q9BXL6 1004 aa17.19■□□□□ 0.34
PRKD1-201ENST00000331968 FOXD4L1Q9NU39 408 aa17.19■□□□□ 0.34
PRKD1-201ENST00000331968 PRAG1Q86YV5 1406 aa17.18■□□□□ 0.34
PRKD1-201ENST00000331968 HAP1P54257 671 aaPredicted RBP17.18■□□□□ 0.34
PRKD1-201ENST00000331968 KDM5BQ9UGL1 1544 aa17.18■□□□□ 0.34
PRKD1-201ENST00000331968 ITSN2Q9NZM3 1697 aa17.18■□□□□ 0.34
PRKD1-201ENST00000331968 ARHGEF12Q9NZN5 1544 aa17.17■□□□□ 0.34
PRKD1-201ENST00000331968 PER1O15534 1290 aaPredicted RBP17.17■□□□□ 0.34
PRKD1-201ENST00000331968 ZRANB1Q9UGI0 708 aa17.17■□□□□ 0.34
PRKD1-201ENST00000331968 AMPHP49418 695 aa17.17■□□□□ 0.34
PRKD1-201ENST00000331968 ABCA8O94911 1581 aa17.16■□□□□ 0.34
PRKD1-201ENST00000331968 DIAPH1O60610 1272 aaKnown RBP17.16■□□□□ 0.34
PRKD1-201ENST00000331968 PDE3BQ13370 1112 aa17.16■□□□□ 0.34
PRKD1-201ENST00000331968 COG3Q96JB2 828 aa17.16■□□□□ 0.34
PRKD1-201ENST00000331968 ARID3AQ99856 593 aa17.16■□□□□ 0.34
PRKD1-201ENST00000331968 TTC37Q6PGP7 1564 aa17.15■□□□□ 0.34
PRKD1-201ENST00000331968 NSD3Q9BZ95 1437 aa17.15■□□□□ 0.34
PRKD1-201ENST00000331968 SMG6Q86US8 1419 aaKnown RBP17.14■□□□□ 0.34
PRKD1-201ENST00000331968 A2MP01023 1474 aa17.14■□□□□ 0.33
PRKD1-201ENST00000331968 SLC52A1Q9NWF4 448 aa17.14■□□□□ 0.33
PRKD1-201ENST00000331968 NCLP19338 710 aaKnown RBP17.14■□□□□ 0.33
PRKD1-201ENST00000331968 SLC4A10Q6U841 1118 aa17.14■□□□□ 0.33
PRKD1-201ENST00000331968 FAM161AQ3B820 660 aa17.13■□□□□ 0.33
PRKD1-201ENST00000331968 MFAP1P55081 439 aaKnown RBP17.13■□□□□ 0.33
PRKD1-201ENST00000331968 AMER1Q5JTC6 1135 aaPredicted RBP17.13■□□□□ 0.33
PRKD1-201ENST00000331968 NME9Q86XW9 330 aa17.12■□□□□ 0.33
PRKD1-201ENST00000331968 PRKAR2BP31323 418 aa17.12■□□□□ 0.33
PRKD1-201ENST00000331968 DCTN1Q14203 1278 aa17.12■□□□□ 0.33
PRKD1-201ENST00000331968 UGGT1Q9NYU2 1555 aa17.12■□□□□ 0.33
PRKD1-201ENST00000331968 SAMD9LQ8IVG5 1584 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms