RNA–Protein interactions for RNA: ENST00000328642.11

SYNM-201, Transcript of synemin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNM, Length 3,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNM-201ENST00000328642 EID1Q9Y6B2 187 aa20.58■□□□□ 0.88
SYNM-201ENST00000328642 FBLN1P23142 703 aa20.57■□□□□ 0.88
SYNM-201ENST00000328642 WAPLQ7Z5K2 1190 aa20.57■□□□□ 0.88
SYNM-201ENST00000328642 ADGRL1O94910 1474 aa20.56■□□□□ 0.88
SYNM-201ENST00000328642 SYCP2Q9BX26 1530 aa20.56■□□□□ 0.88
SYNM-201ENST00000328642 CABP1Q9NZU7 370 aa20.56■□□□□ 0.88
SYNM-201ENST00000328642 PANK1Q8TE04 598 aa20.55■□□□□ 0.88
SYNM-201ENST00000328642 DISP3Q9P2K9 1392 aa20.55■□□□□ 0.88
SYNM-201ENST00000328642 TCP11L2Q8N4U5 519 aa20.55■□□□□ 0.88
SYNM-201ENST00000328642 RBM33Q96EV2 1170 aaKnown RBP20.55■□□□□ 0.88
SYNM-201ENST00000328642 CEBPAP49715 358 aaPredicted RBP20.54■□□□□ 0.88
SYNM-201ENST00000328642 TPRNQ4KMQ1 711 aa20.54■□□□□ 0.88
SYNM-201ENST00000328642 PBRM1Q86U86 1689 aa20.54■□□□□ 0.88
SYNM-201ENST00000328642 BCAR3O75815 825 aa20.54■□□□□ 0.88
SYNM-201ENST00000328642 PMFBP1Q8TBY8 1022 aa20.53■□□□□ 0.88
SYNM-201ENST00000328642 BRD4O60885 1362 aaPredicted RBP20.53■□□□□ 0.88
SYNM-201ENST00000328642 FANCAO15360 1455 aa20.53■□□□□ 0.88
SYNM-201ENST00000328642 ERICH6BQ5W0A0 696 aa20.53■□□□□ 0.88
SYNM-201ENST00000328642 RIPK4P57078 832 aa20.52■□□□□ 0.87
SYNM-201ENST00000328642 AMPHP49418 695 aa20.51■□□□□ 0.87
SYNM-201ENST00000328642 CEP170Q5SW79 1584 aa20.51■□□□□ 0.87
SYNM-201ENST00000328642 NECTIN2Q92692 538 aa20.51■□□□□ 0.87
SYNM-201ENST00000328642 KDM6BO15054 1643 aa20.51■□□□□ 0.87
SYNM-201ENST00000328642 NUP160Q12769 1436 aa20.51■□□□□ 0.87
SYNM-201ENST00000328642 SAMD9Q5K651 1589 aa20.5■□□□□ 0.87
SYNM-201ENST00000328642 TSR2Q969E8 191 aaKnown RBP20.5■□□□□ 0.87
SYNM-201ENST00000328642 RTF1Q92541 710 aaKnown RBP20.49■□□□□ 0.87
SYNM-201ENST00000328642 SLC4A10Q6U841 1118 aa20.49■□□□□ 0.87
SYNM-201ENST00000328642 TCOF1Q13428 1488 aaKnown RBP20.49■□□□□ 0.87
SYNM-201ENST00000328642 COG3Q96JB2 828 aa20.49■□□□□ 0.87
SYNM-201ENST00000328642 DIAPH1O60610 1272 aaKnown RBP20.48■□□□□ 0.87
SYNM-201ENST00000328642 CDK19Q9BWU1 502 aa20.47■□□□□ 0.87
SYNM-201ENST00000328642 PZPP20742 1482 aa20.47■□□□□ 0.87
SYNM-201ENST00000328642 E9PSI1 815 aa20.47■□□□□ 0.87
SYNM-201ENST00000328642 C20orf194Q5TEA3 1177 aa20.46■□□□□ 0.87
SYNM-201ENST00000328642 PDE4AP27815 886 aa20.46■□□□□ 0.87
SYNM-201ENST00000328642 SLKQ9H2G2 1235 aaPredicted RBP20.46■□□□□ 0.87
SYNM-201ENST00000328642 PNNQ9H307 717 aaKnown RBP20.45■□□□□ 0.86
SYNM-201ENST00000328642 ASXL2Q76L83 1435 aa20.45■□□□□ 0.86
SYNM-201ENST00000328642 PLCH2O75038 1416 aa20.44■□□□□ 0.86
SYNM-201ENST00000328642 RUNDC1Q96C34 613 aa20.43■□□□□ 0.86
SYNM-201ENST00000328642 CFAP65Q6ZU64 1925 aaKnown RBP20.42■□□□□ 0.86
SYNM-201ENST00000328642 RRS1Q15050 365 aaKnown RBP20.42■□□□□ 0.86
SYNM-201ENST00000328642 TESK2Q96S53 571 aa20.41■□□□□ 0.86
SYNM-201ENST00000328642 NOS1P29475 1434 aa20.4■□□□□ 0.86
SYNM-201ENST00000328642 ZNF428Q96B54 188 aa20.4■□□□□ 0.86
SYNM-201ENST00000328642 THUMPD2Q9BTF0 503 aaKnown RBP20.4■□□□□ 0.86
SYNM-201ENST00000328642 DDRGK1Q96HY6 314 aa20.39■□□□□ 0.85
SYNM-201ENST00000328642 STAC3Q96MF2 364 aa20.39■□□□□ 0.85
SYNM-201ENST00000328642 SLC52A1Q9NWF4 448 aa20.39■□□□□ 0.85
SYNM-201ENST00000328642 PRKAR2BP31323 418 aa20.38■□□□□ 0.85
SYNM-201ENST00000328642 MFAP1P55081 439 aaKnown RBP20.38■□□□□ 0.85
SYNM-201ENST00000328642 CSB-PGBD3P0DP91 1061 aa20.37■□□□□ 0.85
SYNM-201ENST00000328642 RTN4Q9NQC3 1192 aaKnown RBP20.37■□□□□ 0.85
SYNM-201ENST00000328642 DHX29Q7Z478 1369 aaKnown RBP20.37■□□□□ 0.85
SYNM-201ENST00000328642 IPO8O15397 1037 aaKnown RBP20.37■□□□□ 0.85
SYNM-201ENST00000328642 ZNF330Q9Y3S2 320 aaPredicted RBP20.36■□□□□ 0.85
SYNM-201ENST00000328642 EXOSC9Q06265 439 aaKnown RBP20.36■□□□□ 0.85
SYNM-201ENST00000328642 BECN1Q14457 450 aa20.36■□□□□ 0.85
SYNM-201ENST00000328642 RWDD1Q9H446 243 aaPredicted RBP20.36■□□□□ 0.85
SYNM-201ENST00000328642 NSD3Q9BZ95 1437 aa20.36■□□□□ 0.85
SYNM-201ENST00000328642 FAM135AQ9P2D6 1515 aa20.35■□□□□ 0.85
SYNM-201ENST00000328642 TAOK2Q9UL54 1235 aa20.34■□□□□ 0.85
SYNM-201ENST00000328642 MS4A1P11836 297 aa20.33■□□□□ 0.85
SYNM-201ENST00000328642 IPO9Q96P70 1041 aaKnown RBP20.33■□□□□ 0.85
SYNM-201ENST00000328642 NLRP6P59044 892 aa20.33■□□□□ 0.84
SYNM-201ENST00000328642 XPCQ01831 940 aaPredicted RBP20.33■□□□□ 0.84
SYNM-201ENST00000328642 ZKSCAN2Q63HK3 967 aa20.33■□□□□ 0.84
SYNM-201ENST00000328642 OS9Q13438 667 aaPredicted RBP20.32■□□□□ 0.84
SYNM-201ENST00000328642 FOXD4L1Q9NU39 408 aa20.32■□□□□ 0.84
SYNM-201ENST00000328642 PRAG1Q86YV5 1406 aa20.3■□□□□ 0.84
SYNM-201ENST00000328642 DNMT1P26358 1616 aaKnown RBP20.3■□□□□ 0.84
SYNM-201ENST00000328642 KDM5BQ9UGL1 1544 aa20.3■□□□□ 0.84
SYNM-201ENST00000328642 ERCC6L2Q5T890 1561 aa20.29■□□□□ 0.84
SYNM-201ENST00000328642 EIF2S2P20042 333 aaKnown RBP20.29■□□□□ 0.84
SYNM-201ENST00000328642 DCTN1Q14203 1278 aa20.29■□□□□ 0.84
SYNM-201ENST00000328642 NCKAP5LQ9HCH0 1330 aa20.29■□□□□ 0.84
SYNM-201ENST00000328642 NME9Q86XW9 330 aa20.28■□□□□ 0.84
SYNM-201ENST00000328642 C1orf115Q9H7X2 142 aa20.28■□□□□ 0.84
SYNM-201ENST00000328642 CENPQQ7L2Z9 268 aaPredicted RBP20.28■□□□□ 0.84
SYNM-201ENST00000328642 CARD14Q9BXL6 1004 aa20.28■□□□□ 0.84
SYNM-201ENST00000328642 AMER1Q5JTC6 1135 aaPredicted RBP20.28■□□□□ 0.84
SYNM-201ENST00000328642 ANKRD45Q5TZF3 282 aa20.28■□□□□ 0.84
SYNM-201ENST00000328642 PER1O15534 1290 aaPredicted RBP20.27■□□□□ 0.84
SYNM-201ENST00000328642 DZIP1LQ8IYY4 767 aaKnown RBP20.27■□□□□ 0.84
SYNM-201ENST00000328642 WWC1Q8IX03 1113 aa20.27■□□□□ 0.84
SYNM-201ENST00000328642 NCLP19338 710 aaKnown RBP20.27■□□□□ 0.83
SYNM-201ENST00000328642 EMILIN1Q9Y6C2 1016 aa20.27■□□□□ 0.83
SYNM-201ENST00000328642 TEX14Q8IWB6 1497 aa20.27■□□□□ 0.83
SYNM-201ENST00000328642 PSME1Q06323 249 aa20.26■□□□□ 0.83
SYNM-201ENST00000328642 SULT6B1Q6IMI4 303 aa20.26■□□□□ 0.83
SYNM-201ENST00000328642 NGEFQ8N5V2 710 aa20.26■□□□□ 0.83
SYNM-201ENST00000328642 C14orf93Q9H972 538 aaKnown RBP20.26■□□□□ 0.83
SYNM-201ENST00000328642 LNPKQ9C0E8 428 aa20.26■□□□□ 0.83
SYNM-201ENST00000328642 ITSN2Q9NZM3 1697 aa20.26■□□□□ 0.83
SYNM-201ENST00000328642 WDR7Q9Y4E6 1490 aa20.25■□□□□ 0.83
SYNM-201ENST00000328642 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.25■□□□□ 0.83
SYNM-201ENST00000328642 SMG6Q86US8 1419 aaKnown RBP20.25■□□□□ 0.83
SYNM-201ENST00000328642 DEKP35659 375 aaKnown RBP20.24■□□□□ 0.83
SYNM-201ENST00000328642 ZRANB1Q9UGI0 708 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms