RNA–Protein interactions for RNA: ENST00000328111.6

DNMT3B-202, Transcript of DNA methyltransferase 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT3B, Length 4,336 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-202ENST00000328111 SLC12A5Q9H2X9 1139 aa17.38■□□□□ 0.37
DNMT3B-202ENST00000328111 PANK1Q8TE04 598 aa17.38■□□□□ 0.37
DNMT3B-202ENST00000328111 THOC2Q8NI27 1593 aaKnown RBP17.37■□□□□ 0.37
DNMT3B-202ENST00000328111 SMG6Q86US8 1419 aaKnown RBP17.36■□□□□ 0.37
DNMT3B-202ENST00000328111 TCP11L2Q8N4U5 519 aa17.36■□□□□ 0.37
DNMT3B-202ENST00000328111 RIPK4P57078 832 aa17.35■□□□□ 0.37
DNMT3B-202ENST00000328111 DIAPH1O60610 1272 aaKnown RBP17.35■□□□□ 0.37
DNMT3B-202ENST00000328111 NGDNQ8NEJ9 315 aaKnown RBP17.35■□□□□ 0.37
DNMT3B-202ENST00000328111 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
DNMT3B-202ENST00000328111 ERBINQ96RT1 1412 aa17.34■□□□□ 0.37
DNMT3B-202ENST00000328111 LMOD3Q0VAK6 560 aa17.32■□□□□ 0.36
DNMT3B-202ENST00000328111 DZIP1LQ8IYY4 767 aaKnown RBP17.32■□□□□ 0.36
DNMT3B-202ENST00000328111 PLEKHH2Q8IVE3 1493 aa17.32■□□□□ 0.36
DNMT3B-202ENST00000328111 CCDC141Q6ZP82 1450 aa17.32■□□□□ 0.36
DNMT3B-202ENST00000328111 COG3Q96JB2 828 aa17.32■□□□□ 0.36
DNMT3B-202ENST00000328111 BCAR3O75815 825 aa17.31■□□□□ 0.36
DNMT3B-202ENST00000328111 LTV1Q96GA3 475 aaPredicted RBP17.31■□□□□ 0.36
DNMT3B-202ENST00000328111 STK31Q9BXU1 1019 aa17.31■□□□□ 0.36
DNMT3B-202ENST00000328111 KCNJ4P48050 445 aa17.3■□□□□ 0.36
DNMT3B-202ENST00000328111 AMPHP49418 695 aa17.3■□□□□ 0.36
DNMT3B-202ENST00000328111 UGGT2Q9NYU1 1516 aa17.3■□□□□ 0.36
DNMT3B-202ENST00000328111 ANKRD45Q5TZF3 282 aa17.3■□□□□ 0.36
DNMT3B-202ENST00000328111 USP35Q9P2H5 1018 aa17.3■□□□□ 0.36
DNMT3B-202ENST00000328111 EID1Q9Y6B2 187 aa17.3■□□□□ 0.36
DNMT3B-202ENST00000328111 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
DNMT3B-202ENST00000328111 GPATCH8Q9UKJ3 1502 aaKnown RBP17.29■□□□□ 0.36
DNMT3B-202ENST00000328111 PTMAP06454 111 aaKnown RBP17.29■□□□□ 0.36
DNMT3B-202ENST00000328111 HMOX1P09601 288 aa17.28■□□□□ 0.36
DNMT3B-202ENST00000328111 FAM69CQ0P6D2 419 aa17.28■□□□□ 0.36
DNMT3B-202ENST00000328111 L1TD1Q5T7N2 865 aaKnown RBP17.28■□□□□ 0.36
DNMT3B-202ENST00000328111 DDX19BQ9UMR2 479 aa17.27■□□□□ 0.36
DNMT3B-202ENST00000328111 RAPGEF3O95398 923 aa17.27■□□□□ 0.35
DNMT3B-202ENST00000328111 CFAP44Q96MT7 982 aa17.26■□□□□ 0.35
DNMT3B-202ENST00000328111 MCCP23508 829 aa17.25■□□□□ 0.35
DNMT3B-202ENST00000328111 GBP4Q96PP9 640 aa17.25■□□□□ 0.35
DNMT3B-202ENST00000328111 PLCB2Q00722 1185 aa17.24■□□□□ 0.35
DNMT3B-202ENST00000328111 NAP1L5Q96NT1 182 aaPredicted RBP17.24■□□□□ 0.35
DNMT3B-202ENST00000328111 NUP153P49790 1475 aaKnown RBP17.24■□□□□ 0.35
DNMT3B-202ENST00000328111 HMMRO75330 724 aa17.23■□□□□ 0.35
DNMT3B-202ENST00000328111 BACH2Q9BYV9 841 aa17.23■□□□□ 0.35
DNMT3B-202ENST00000328111 PRAM1Q96QH2 718 aa17.23■□□□□ 0.35
DNMT3B-202ENST00000328111 FGD1P98174 961 aa17.21■□□□□ 0.35
DNMT3B-202ENST00000328111 SKAP1Q86WV1 359 aa17.21■□□□□ 0.35
DNMT3B-202ENST00000328111 LNPKQ9C0E8 428 aa17.21■□□□□ 0.35
DNMT3B-202ENST00000328111 TRIM6-TRIM34B2RNG4 842 aa17.21■□□□□ 0.35
DNMT3B-202ENST00000328111 TSR2Q969E8 191 aaKnown RBP17.21■□□□□ 0.35
DNMT3B-202ENST00000328111 MSH5O43196 834 aa17.2■□□□□ 0.34
DNMT3B-202ENST00000328111 EXOSC9Q06265 439 aaKnown RBP17.2■□□□□ 0.34
DNMT3B-202ENST00000328111 GSE1Q14687 1217 aa17.2■□□□□ 0.34
DNMT3B-202ENST00000328111 KIF14Q15058 1648 aa17.2■□□□□ 0.34
DNMT3B-202ENST00000328111 C20orf194Q5TEA3 1177 aa17.19■□□□□ 0.34
DNMT3B-202ENST00000328111 PDE3AQ14432 1141 aa17.19■□□□□ 0.34
DNMT3B-202ENST00000328111 TAOK2Q9UL54 1235 aa17.18■□□□□ 0.34
DNMT3B-202ENST00000328111 GLIPR1L2Q4G1C9 344 aa17.18■□□□□ 0.34
DNMT3B-202ENST00000328111 KIAA1211Q6ZU35 1233 aa17.18■□□□□ 0.34
DNMT3B-202ENST00000328111 KIF16BQ96L93 1317 aa17.17■□□□□ 0.34
DNMT3B-202ENST00000328111 ATP10BO94823 1461 aa17.17■□□□□ 0.34
DNMT3B-202ENST00000328111 DNTTIP2Q5QJE6 756 aaKnown RBP17.17■□□□□ 0.34
DNMT3B-202ENST00000328111 CFAP43Q8NDM7 1665 aa17.17■□□□□ 0.34
DNMT3B-202ENST00000328111 SLFN5Q08AF3 891 aa17.17■□□□□ 0.34
DNMT3B-202ENST00000328111 PRKAR2BP31323 418 aa17.16■□□□□ 0.34
DNMT3B-202ENST00000328111 NOL8Q76FK4 1167 aaKnown RBP17.16■□□□□ 0.34
DNMT3B-202ENST00000328111 ADGRF5Q8IZF2 1346 aa17.16■□□□□ 0.34
DNMT3B-202ENST00000328111 GOLGA6L3A6NEY3 463 aa17.16■□□□□ 0.34
DNMT3B-202ENST00000328111 CTTNBP2Q8WZ74 1663 aa17.16■□□□□ 0.34
DNMT3B-202ENST00000328111 NAP1L2Q9ULW6 460 aaPredicted RBP17.16■□□□□ 0.34
DNMT3B-202ENST00000328111 NFKBIBQ15653 356 aa17.15■□□□□ 0.34
DNMT3B-202ENST00000328111 CABP1Q9NZU7 370 aa17.15■□□□□ 0.34
DNMT3B-202ENST00000328111 DISP3Q9P2K9 1392 aa17.15■□□□□ 0.34
DNMT3B-202ENST00000328111 GNAI1P63096 354 aa17.15■□□□□ 0.34
DNMT3B-202ENST00000328111 TCOF1Q13428 1488 aaKnown RBP17.14■□□□□ 0.34
DNMT3B-202ENST00000328111 CSB-PGBD3P0DP91 1061 aa17.14■□□□□ 0.33
DNMT3B-202ENST00000328111 WWC1Q8IX03 1113 aa17.14■□□□□ 0.33
DNMT3B-202ENST00000328111 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
DNMT3B-202ENST00000328111 API5Q9BZZ5 524 aaKnown RBP17.14■□□□□ 0.33
DNMT3B-202ENST00000328111 PDZRN3Q9UPQ7 1066 aa17.14■□□□□ 0.33
DNMT3B-202ENST00000328111 SLC52A1Q9NWF4 448 aa17.13■□□□□ 0.33
DNMT3B-202ENST00000328111 RAPGEF6Q8TEU7 1601 aa17.13■□□□□ 0.33
DNMT3B-202ENST00000328111 AAMPQ13685 434 aa17.12■□□□□ 0.33
DNMT3B-202ENST00000328111 CDK19Q9BWU1 502 aa17.11■□□□□ 0.33
DNMT3B-202ENST00000328111 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.11■□□□□ 0.33
DNMT3B-202ENST00000328111 C22orf23Q9BZE7 217 aa17.11■□□□□ 0.33
DNMT3B-202ENST00000328111 NSD3Q9BZ95 1437 aa17.11■□□□□ 0.33
DNMT3B-202ENST00000328111 GOLGA6L4A6NEF3 574 aa17.11■□□□□ 0.33
DNMT3B-202ENST00000328111 TXNDC2Q86VQ3 553 aa17.11■□□□□ 0.33
DNMT3B-202ENST00000328111 ZRSR1Q15695 479 aaKnown RBP17.1■□□□□ 0.33
DNMT3B-202ENST00000328111 FOXD4L5Q5VV16 416 aaPredicted RBP17.1■□□□□ 0.33
DNMT3B-202ENST00000328111 FOXD4L4Q8WXT5 416 aaPredicted RBP17.1■□□□□ 0.33
DNMT3B-202ENST00000328111 RILPL2Q969X0 211 aa17.1■□□□□ 0.33
DNMT3B-202ENST00000328111 CHMP4AQ9BY43 222 aa17.1■□□□□ 0.33
DNMT3B-202ENST00000328111 WDR63Q8IWG1 891 aa17.1■□□□□ 0.33
DNMT3B-202ENST00000328111 ST18O60284 1047 aa17.09■□□□□ 0.33
DNMT3B-202ENST00000328111 ZNF330Q9Y3S2 320 aaPredicted RBP17.08■□□□□ 0.33
DNMT3B-202ENST00000328111 DUSP27Q5VZP5 1158 aa17.08■□□□□ 0.32
DNMT3B-202ENST00000328111 WDR62O43379 1518 aa17.08■□□□□ 0.32
DNMT3B-202ENST00000328111 NOB1Q9ULX3 412 aaKnown RBP17.08■□□□□ 0.32
DNMT3B-202ENST00000328111 EIF2S2P20042 333 aaKnown RBP17.07■□□□□ 0.32
DNMT3B-202ENST00000328111 RPGRIP1LQ68CZ1 1315 aa17.07■□□□□ 0.32
DNMT3B-202ENST00000328111 MSNP26038 577 aaKnown RBP17.07■□□□□ 0.32
DNMT3B-202ENST00000328111 NUTM2GQ5VZR2 741 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms