RNA–Protein interactions for RNA: ENST00000327578.9

PCM1-202, Transcript of pericentriolar material 1, humanhuman

TSL 5 BASIC

Gene PCM1, Length 8,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-202ENST00000327578 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
PCM1-202ENST00000327578 CPLX2Q6PUV4 134 aaKnown RBP16.71■□□□□ 0.27
PCM1-202ENST00000327578 RRP1P56182 461 aaKnown RBP16.71■□□□□ 0.27
PCM1-202ENST00000327578 REC8O95072 547 aa16.71■□□□□ 0.27
PCM1-202ENST00000327578 EXOC6Q8TAG9 804 aa16.71■□□□□ 0.27
PCM1-202ENST00000327578 EPS15P42566 896 aa16.71■□□□□ 0.27
PCM1-202ENST00000327578 RUFY2Q8WXA3 655 aa16.71■□□□□ 0.27
PCM1-202ENST00000327578 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.7■□□□□ 0.26
PCM1-202ENST00000327578 CGNL1Q0VF96 1302 aa16.7■□□□□ 0.26
PCM1-202ENST00000327578 KRI1Q8N9T8 703 aaKnown RBP16.7■□□□□ 0.26
PCM1-202ENST00000327578 VPS37CA5D8V6 355 aaPredicted RBP16.7■□□□□ 0.26
PCM1-202ENST00000327578 ERCC4Q92889 916 aaPredicted RBP16.7■□□□□ 0.26
PCM1-202ENST00000327578 TSPYL1Q9H0U9 437 aa16.7■□□□□ 0.26
PCM1-202ENST00000327578 CNKSR2Q8WXI2 1034 aa16.69■□□□□ 0.26
PCM1-202ENST00000327578 CCDC173Q0VFZ6 552 aa16.69■□□□□ 0.26
PCM1-202ENST00000327578 CPLX1O14810 134 aa16.68■□□□□ 0.26
PCM1-202ENST00000327578 SMC3Q9UQE7 1217 aa16.68■□□□□ 0.26
PCM1-202ENST00000327578 KIF15Q9NS87 1388 aa16.68■□□□□ 0.26
PCM1-202ENST00000327578 ZKSCAN1P17029 563 aaPredicted RBP16.68■□□□□ 0.26
PCM1-202ENST00000327578 LRRFIP1Q32MZ4 808 aaKnown RBP16.68■□□□□ 0.26
PCM1-202ENST00000327578 NAT10Q9H0A0 1025 aaKnown RBP16.68■□□□□ 0.26
PCM1-202ENST00000327578 OLFM4Q6UX06 510 aa16.68■□□□□ 0.26
PCM1-202ENST00000327578 WRNQ14191 1432 aaPredicted RBP eCLIP16.68■□□□□ 0.26
PCM1-202ENST00000327578 ZFYVE27Q5T4F4 411 aa16.67■□□□□ 0.26
PCM1-202ENST00000327578 NLRP13Q86W25 1043 aa16.67■□□□□ 0.26
PCM1-202ENST00000327578 MYO6Q9UM54 1294 aa16.67■□□□□ 0.26
PCM1-202ENST00000327578 GTF2E1P29083 439 aaPredicted RBP16.67■□□□□ 0.26
PCM1-202ENST00000327578 NUCB2P80303 420 aa16.67■□□□□ 0.26
PCM1-202ENST00000327578 LTV1Q96GA3 475 aaPredicted RBP16.67■□□□□ 0.26
PCM1-202ENST00000327578 NFKBIBQ15653 356 aa16.66■□□□□ 0.26
PCM1-202ENST00000327578 AMOTL1Q8IY63 956 aa16.66■□□□□ 0.26
PCM1-202ENST00000327578 NFXL1Q6ZNB6 911 aa16.66■□□□□ 0.26
PCM1-202ENST00000327578 DHX37Q8IY37 1157 aaKnown RBP16.66■□□□□ 0.26
PCM1-202ENST00000327578 AMPHP49418 695 aa16.65■□□□□ 0.26
PCM1-202ENST00000327578 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.65■□□□□ 0.262e-7■■■□□ 16.9
PCM1-202ENST00000327578 TRIM34Q9BYJ4 488 aa16.65■□□□□ 0.26
PCM1-202ENST00000327578 AXDND1Q5T1B0 1012 aaPredicted RBP16.65■□□□□ 0.26
PCM1-202ENST00000327578 RAB3GAP2Q9H2M9 1393 aa16.65■□□□□ 0.26
PCM1-202ENST00000327578 TERF2IPQ9NYB0 399 aa16.65■□□□□ 0.26
PCM1-202ENST00000327578 COG6Q9Y2V7 657 aa16.65■□□□□ 0.26
PCM1-202ENST00000327578 ZKSCAN2Q63HK3 967 aa16.64■□□□□ 0.25
PCM1-202ENST00000327578 ELL2O00472 640 aaPredicted RBP16.64■□□□□ 0.25
PCM1-202ENST00000327578 MRE11P49959 708 aa16.64■□□□□ 0.25
PCM1-202ENST00000327578 MPHOSPH9Q99550 1183 aa16.64■□□□□ 0.25
PCM1-202ENST00000327578 CCDC73Q6ZRK6 1079 aa16.64■□□□□ 0.25
PCM1-202ENST00000327578 CTDP1Q9Y5B0 961 aaPredicted RBP16.63■□□□□ 0.25
PCM1-202ENST00000327578 RNF214Q8ND24 703 aa16.63■□□□□ 0.25
PCM1-202ENST00000327578 NOL10Q9BSC4 688 aaKnown RBP16.63■□□□□ 0.25
PCM1-202ENST00000327578 TRDNQ13061 729 aa16.63■□□□□ 0.25
PCM1-202ENST00000327578 RNF20Q5VTR2 975 aa16.63■□□□□ 0.25
PCM1-202ENST00000327578 GGT6Q6P531 493 aa16.62■□□□□ 0.25
PCM1-202ENST00000327578 MYBBP1AQ9BQG0 1328 aaKnown RBP16.62■□□□□ 0.25
PCM1-202ENST00000327578 ERICH2A1L162 156 aa16.62■□□□□ 0.25
PCM1-202ENST00000327578 DHX16O60231 1041 aaKnown RBP16.62■□□□□ 0.25
PCM1-202ENST00000327578 CCDC43Q96MW1 224 aaKnown RBP16.61■□□□□ 0.25
PCM1-202ENST00000327578 CT47B1P0C2W7 299 aaPredicted RBP16.61■□□□□ 0.25
PCM1-202ENST00000327578 INTS3Q68E01 1043 aaKnown RBP16.61■□□□□ 0.25
PCM1-202ENST00000327578 KIAA0754O94854 1291 aa16.61■□□□□ 0.25
PCM1-202ENST00000327578 OFD1O75665 1012 aa16.61■□□□□ 0.25
PCM1-202ENST00000327578 SMC2O95347 1197 aa16.61■□□□□ 0.25
PCM1-202ENST00000327578 TRIM5Q9C035 493 aa16.6■□□□□ 0.25
PCM1-202ENST00000327578 E9PSI1 815 aa16.6■□□□□ 0.25
PCM1-202ENST00000327578 NEFHP12036 1026 aa16.6■□□□□ 0.25
PCM1-202ENST00000327578 NGEFQ8N5V2 710 aa16.6■□□□□ 0.25
PCM1-202ENST00000327578 C9orf78Q9NZ63 289 aaPredicted RBP16.6■□□□□ 0.25
PCM1-202ENST00000327578 IFIT2P09913 472 aaKnown RBP16.6■□□□□ 0.25
PCM1-202ENST00000327578 SPC24Q8NBT2 197 aa16.6■□□□□ 0.25
PCM1-202ENST00000327578 CAVIN1Q6NZI2 390 aaKnown RBP16.59■□□□□ 0.25
PCM1-202ENST00000327578 MAPK8IP2Q13387 824 aaPredicted RBP16.59■□□□□ 0.25
PCM1-202ENST00000327578 ZRSR2Q15696 482 aaKnown RBP16.59■□□□□ 0.25
PCM1-202ENST00000327578 C22orf23Q9BZE7 217 aa16.59■□□□□ 0.25
PCM1-202ENST00000327578 LETM1O95202 739 aaPredicted RBP16.59■□□□□ 0.25
PCM1-202ENST00000327578 SAFBQ15424 915 aaKnown RBP eCLIP16.59■□□□□ 0.25
PCM1-202ENST00000327578 TRAK2O60296 914 aa16.58■□□□□ 0.25
PCM1-202ENST00000327578 ZBED9Q6R2W3 1325 aa16.58■□□□□ 0.24
PCM1-202ENST00000327578 CCDC27Q2M243 656 aa16.58■□□□□ 0.24
PCM1-202ENST00000327578 BRPF3Q9ULD4 1205 aa16.57■□□□□ 0.24
PCM1-202ENST00000327578 GOLGA6L10A6NI86 522 aa16.57■□□□□ 0.24
PCM1-202ENST00000327578 TSPY26PQ9H489 355 aa16.57■□□□□ 0.24
PCM1-202ENST00000327578 NECTIN2Q92692 538 aa16.57■□□□□ 0.24
PCM1-202ENST00000327578 NGDNQ8NEJ9 315 aaKnown RBP16.56■□□□□ 0.24
PCM1-202ENST00000327578 DDX19BQ9UMR2 479 aa16.56■□□□□ 0.24
PCM1-202ENST00000327578 SMARCE1Q969G3 411 aa16.56■□□□□ 0.24
PCM1-202ENST00000327578 SEPT7Q16181 437 aaKnown RBP16.56■□□□□ 0.24
PCM1-202ENST00000327578 NUP155O75694 1391 aa16.56■□□□□ 0.24
PCM1-202ENST00000327578 CCP110O43303 1012 aa16.56■□□□□ 0.24
PCM1-202ENST00000327578 SDF4Q9BRK5 362 aa16.56■□□□□ 0.24
PCM1-202ENST00000327578 VPS37DQ86XT2 251 aa16.55■□□□□ 0.24
PCM1-202ENST00000327578 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.55■□□□□ 0.24
PCM1-202ENST00000327578 ENOX2Q16206 610 aaKnown RBP16.55■□□□□ 0.24
PCM1-202ENST00000327578 BRPF1P55201 1214 aaPredicted RBP16.55■□□□□ 0.24
PCM1-202ENST00000327578 IL27Q8NEV9 243 aa16.55■□□□□ 0.24
PCM1-202ENST00000327578 C1orf141Q5JVX7 400 aa16.55■□□□□ 0.24
PCM1-202ENST00000327578 ROCK1Q13464 1354 aa16.55■□□□□ 0.24
PCM1-202ENST00000327578 ANKRD62A6NC57 917 aa16.54■□□□□ 0.24
PCM1-202ENST00000327578 ERLIN2O94905 339 aa16.54■□□□□ 0.24
PCM1-202ENST00000327578 DYDC1Q8WWB3 177 aa16.54■□□□□ 0.24
PCM1-202ENST00000327578 KDM4AO75164 1064 aa16.54■□□□□ 0.24
PCM1-202ENST00000327578 UQCRHLA0A096LP55 91 aa16.53■□□□□ 0.24
PCM1-202ENST00000327578 UQCRHP07919 91 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms