RNA–Protein interactions for RNA: ENST00000326539.6

PRNT-201, Transcript of prion locus lncRNA, testis expressed, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNT, Length 2,333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNT-201ENST00000326539 ARHGAP35Q9NRY4 1499 aa12.1□□□□□ -0.47
PRNT-201ENST00000326539 CNTLNQ9NXG0 1405 aa12.1□□□□□ -0.47
PRNT-201ENST00000326539 AGLP35573 1532 aa12.1□□□□□ -0.47
PRNT-201ENST00000326539 FMN1Q68DA7 1419 aa12.09□□□□□ -0.47
PRNT-201ENST00000326539 GPATCH11Q8N954 259 aa12.09□□□□□ -0.47
PRNT-201ENST00000326539 POTEAQ6S8J7 498 aa12.09□□□□□ -0.47
PRNT-201ENST00000326539 NUP153P49790 1475 aaKnown RBP12.08□□□□□ -0.48
PRNT-201ENST00000326539 EXOC8Q8IYI6 725 aa12.08□□□□□ -0.48
PRNT-201ENST00000326539 ALKQ9UM73 1620 aa12.08□□□□□ -0.48
PRNT-201ENST00000326539 PLCH2O75038 1416 aa12.07□□□□□ -0.48
PRNT-201ENST00000326539 LOC102724159A0A0B4J2E5 919 aa12.06□□□□□ -0.48
PRNT-201ENST00000326539 PWP2Q15269 919 aaKnown RBP12.06□□□□□ -0.48
PRNT-201ENST00000326539 SHANK2Q9UPX8 1470 aa12.05□□□□□ -0.48
PRNT-201ENST00000326539 ECM2O94769 699 aaPredicted RBP12.05□□□□□ -0.48
PRNT-201ENST00000326539 ZNF142P52746 1687 aaPredicted RBP12.04□□□□□ -0.48
PRNT-201ENST00000326539 SLC24A3Q9HC58 644 aa12.04□□□□□ -0.48
PRNT-201ENST00000326539 ZNF518AQ6AHZ1 1483 aa12.04□□□□□ -0.48
PRNT-201ENST00000326539 DIP2CQ9Y2E4 1556 aa12.04□□□□□ -0.48
PRNT-201ENST00000326539 HSP90AB4PQ58FF6 505 aa12.04□□□□□ -0.48
PRNT-201ENST00000326539 RGL2O15211 777 aa12.03□□□□□ -0.48
PRNT-201ENST00000326539 KDM5CP41229 1560 aa12.03□□□□□ -0.48
PRNT-201ENST00000326539 CLIP1P30622 1438 aa12.03□□□□□ -0.48
PRNT-201ENST00000326539 MROH2AA6NES4 1674 aa12.02□□□□□ -0.48
PRNT-201ENST00000326539 EFCAB2Q5VUJ9 269 aa12.02□□□□□ -0.49
PRNT-201ENST00000326539 FTSJ3Q8IY81 847 aaKnown RBP12.02□□□□□ -0.49
PRNT-201ENST00000326539 RIPOR2Q9Y4F9 1068 aa12.02□□□□□ -0.49
PRNT-201ENST00000326539 ZMYM3Q14202 1370 aa12.01□□□□□ -0.49
PRNT-201ENST00000326539 NEFMP07197 916 aa12.01□□□□□ -0.49
PRNT-201ENST00000326539 UPF1Q92900 1129 aaKnown RBP eCLIP12.01□□□□□ -0.49
PRNT-201ENST00000326539 PTMAP06454 111 aaKnown RBP12□□□□□ -0.49
PRNT-201ENST00000326539 CEP170BQ9Y4F5 1589 aaPredicted RBP12□□□□□ -0.49
PRNT-201ENST00000326539 AFAP1Q8N556 730 aa12□□□□□ -0.49
PRNT-201ENST00000326539 SUPT6HQ7KZ85 1726 aaKnown RBP12□□□□□ -0.49
PRNT-201ENST00000326539 MKRN3Q13064 507 aaKnown RBP11.99□□□□□ -0.49
PRNT-201ENST00000326539 MYO3AQ8NEV4 1616 aa11.99□□□□□ -0.49
PRNT-201ENST00000326539 MLH3Q9UHC1 1453 aa11.99□□□□□ -0.49
PRNT-201ENST00000326539 CASKIN1Q8WXD9 1431 aa11.99□□□□□ -0.49
PRNT-201ENST00000326539 ATXN8OSP0DMR3 200 aa11.98□□□□□ -0.49
PRNT-201ENST00000326539 MYT1LQ9UL68 1186 aa11.98□□□□□ -0.49
PRNT-201ENST00000326539 SETD1AO15047 1707 aaKnown RBP11.98□□□□□ -0.49
PRNT-201ENST00000326539 TMTC2Q8N394 836 aa11.98□□□□□ -0.49
PRNT-201ENST00000326539 SENP3Q9H4L4 574 aaPredicted RBP11.98□□□□□ -0.49
PRNT-201ENST00000326539 ABCA6Q8N139 1617 aa11.97□□□□□ -0.49
PRNT-201ENST00000326539 BRD1O95696 1058 aa11.97□□□□□ -0.49
PRNT-201ENST00000326539 OS9Q13438 667 aaPredicted RBP11.97□□□□□ -0.49
PRNT-201ENST00000326539 FAM50AQ14320 339 aaKnown RBP11.97□□□□□ -0.49
PRNT-201ENST00000326539 CDK13Q14004 1512 aaKnown RBP11.96□□□□□ -0.49
PRNT-201ENST00000326539 FYCO1Q9BQS8 1478 aa11.96□□□□□ -0.49
PRNT-201ENST00000326539 CEP162Q5TB80 1403 aa11.96□□□□□ -0.5
PRNT-201ENST00000326539 VWDEQ8N2E2 1590 aa11.96□□□□□ -0.5
PRNT-201ENST00000326539 CCDC18Q5T9S5 1454 aa11.96□□□□□ -0.5
PRNT-201ENST00000326539 CHMP4BQ9H444 224 aaKnown RBP11.95□□□□□ -0.5
PRNT-201ENST00000326539 LAS1LQ9Y4W2 734 aaKnown RBP11.95□□□□□ -0.5
PRNT-201ENST00000326539 SGSM3Q96HU1 749 aa11.95□□□□□ -0.5
PRNT-201ENST00000326539 SMARCA5O60264 1052 aaPredicted RBP11.94□□□□□ -0.5
PRNT-201ENST00000326539 NEURL4Q96JN8 1562 aa11.94□□□□□ -0.5
PRNT-201ENST00000326539 ATP1B4Q9UN42 357 aaPredicted RBP11.93□□□□□ -0.5
PRNT-201ENST00000326539 ZC3H15Q8WU90 426 aaKnown RBP11.93□□□□□ -0.5
PRNT-201ENST00000326539 A2ML1A8K2U0 1454 aa11.93□□□□□ -0.5
PRNT-201ENST00000326539 RNF17Q9BXT8 1623 aaKnown RBP11.92□□□□□ -0.5
PRNT-201ENST00000326539 POLR1AO95602 1720 aaPredicted RBP11.92□□□□□ -0.5
PRNT-201ENST00000326539 MYO5CQ9NQX4 1742 aa11.92□□□□□ -0.5
PRNT-201ENST00000326539 IRF5Q13568 498 aa11.92□□□□□ -0.5
PRNT-201ENST00000326539 NOL8Q76FK4 1167 aaKnown RBP11.92□□□□□ -0.5
PRNT-201ENST00000326539 DNMT1P26358 1616 aaKnown RBP11.91□□□□□ -0.5
PRNT-201ENST00000326539 TROQ12816 1431 aaPredicted RBP11.91□□□□□ -0.5
PRNT-201ENST00000326539 PCGF6Q9BYE7 350 aa11.91□□□□□ -0.5
PRNT-201ENST00000326539 CHGAP10645 457 aaKnown RBP11.91□□□□□ -0.5
PRNT-201ENST00000326539 LRRC7Q96NW7 1537 aa11.9□□□□□ -0.5
PRNT-201ENST00000326539 CANXP27824 592 aaKnown RBP11.89□□□□□ -0.51
PRNT-201ENST00000326539 FBXW7Q969H0 707 aa11.89□□□□□ -0.51
PRNT-201ENST00000326539 LRRIQ1Q96JM4 1722 aa11.89□□□□□ -0.51
PRNT-201ENST00000326539 SPTY2D1Q68D10 685 aaPredicted RBP11.88□□□□□ -0.51
PRNT-201ENST00000326539 ANKRD13AQ8IZ07 590 aa11.88□□□□□ -0.51
PRNT-201ENST00000326539 KIF14Q15058 1648 aa11.88□□□□□ -0.51
PRNT-201ENST00000326539 FAM193AP78312 1265 aa11.87□□□□□ -0.51
PRNT-201ENST00000326539 ANKLE2Q86XL3 938 aa11.87□□□□□ -0.51
PRNT-201ENST00000326539 IGSF5Q9NSI5 407 aa11.87□□□□□ -0.51
PRNT-201ENST00000326539 MED14O60244 1454 aa11.87□□□□□ -0.51
PRNT-201ENST00000326539 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
PRNT-201ENST00000326539 SPATA32Q96LK8 384 aa11.87□□□□□ -0.51
PRNT-201ENST00000326539 FAM135BQ49AJ0 1406 aa11.86□□□□□ -0.51
PRNT-201ENST00000326539 CLTCQ00610 1675 aaKnown RBP11.86□□□□□ -0.51
PRNT-201ENST00000326539 SYNMO15061 1565 aa11.86□□□□□ -0.51
PRNT-201ENST00000326539 BARGINQ6ZT62 677 aa11.86□□□□□ -0.51
PRNT-201ENST00000326539 FAM9BQ8IZU0 186 aa11.86□□□□□ -0.51
PRNT-201ENST00000326539 ARHGAP5Q13017 1502 aa11.86□□□□□ -0.51
PRNT-201ENST00000326539 RETREG2Q8NC44 543 aa11.86□□□□□ -0.51
PRNT-201ENST00000326539 KIDINS220Q9ULH0 1771 aa11.85□□□□□ -0.51
PRNT-201ENST00000326539 NPHP4O75161 1426 aaPredicted RBP11.85□□□□□ -0.51
PRNT-201ENST00000326539 IL27Q8NEV9 243 aa11.85□□□□□ -0.51
PRNT-201ENST00000326539 VPS8Q8N3P4 1428 aa11.83□□□□□ -0.51
PRNT-201ENST00000326539 STRCP1A6NGW2 1772 aa11.83□□□□□ -0.52
PRNT-201ENST00000326539 DEPDC5O75140 1603 aa11.83□□□□□ -0.52
PRNT-201ENST00000326539 MARCH6O60337 910 aa11.82□□□□□ -0.52
PRNT-201ENST00000326539 FOXD4L6Q3SYB3 417 aaPredicted RBP11.82□□□□□ -0.52
PRNT-201ENST00000326539 FOXD4L3Q6VB84 417 aaPredicted RBP11.82□□□□□ -0.52
PRNT-201ENST00000326539 AMOTL2Q9Y2J4 779 aa11.82□□□□□ -0.52
PRNT-201ENST00000326539 WDR70Q9NW82 654 aa11.82□□□□□ -0.52
PRNT-201ENST00000326539 UNCXA6NJT0 531 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms