RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 LTKP29376 864 aa13.97□□□□□ -0.17
ABCF1-201ENST00000326195 C14orf37Q86TY3 774 aa13.97□□□□□ -0.17
ABCF1-201ENST00000326195 EID1Q9Y6B2 187 aa13.97□□□□□ -0.17
ABCF1-201ENST00000326195 ARHGEF40Q8TER5 1519 aa13.97□□□□□ -0.17
ABCF1-201ENST00000326195 CEP152O94986 1710 aa13.97□□□□□ -0.17
ABCF1-201ENST00000326195 HSPA5P11021 654 aaKnown RBP13.96□□□□□ -0.17
ABCF1-201ENST00000326195 ABCC3O15438 1527 aa13.96□□□□□ -0.17
ABCF1-201ENST00000326195 ROCK2O75116 1388 aaKnown RBP13.95□□□□□ -0.18
ABCF1-201ENST00000326195 ST20-MTHFSA0A0A6YYL1 179 aa13.95□□□□□ -0.18
ABCF1-201ENST00000326195 NOS1P29475 1434 aa13.94□□□□□ -0.18
ABCF1-201ENST00000326195 ZMYM4Q5VZL5 1548 aa13.94□□□□□ -0.18
ABCF1-201ENST00000326195 VGFO15240 615 aaPredicted RBP13.94□□□□□ -0.18
ABCF1-201ENST00000326195 THEMISQ8N1K5 641 aaPredicted RBP13.94□□□□□ -0.18
ABCF1-201ENST00000326195 PPP4R2Q9NY27 417 aa13.94□□□□□ -0.18
ABCF1-201ENST00000326195 POGKQ9P215 609 aa13.93□□□□□ -0.18
ABCF1-201ENST00000326195 CLTCQ00610 1675 aaKnown RBP13.93□□□□□ -0.18
ABCF1-201ENST00000326195 EIF4G2P78344 907 aaKnown RBP eCLIP13.93□□□□□ -0.18
ABCF1-201ENST00000326195 WAPLQ7Z5K2 1190 aa13.92□□□□□ -0.18
ABCF1-201ENST00000326195 PPP6R1Q9UPN7 881 aa13.92□□□□□ -0.18
ABCF1-201ENST00000326195 RPRD2Q5VT52 1461 aaKnown RBP13.91□□□□□ -0.18
ABCF1-201ENST00000326195 MINK1Q8N4C8 1332 aaPredicted RBP13.9□□□□□ -0.18
ABCF1-201ENST00000326195 TMC1Q8TDI8 760 aa13.9□□□□□ -0.18
ABCF1-201ENST00000326195 MROH1Q8NDA8 1641 aa13.89□□□□□ -0.19
ABCF1-201ENST00000326195 KDM5DQ9BY66 1539 aa13.89□□□□□ -0.19
ABCF1-201ENST00000326195 ANKLE2Q86XL3 938 aa13.89□□□□□ -0.19
ABCF1-201ENST00000326195 E9PCH4 1651 aa13.88□□□□□ -0.19
ABCF1-201ENST00000326195 MADDQ8WXG6 1647 aa13.88□□□□□ -0.19
ABCF1-201ENST00000326195 ERVK-7P63135 1459 aa13.87□□□□□ -0.19
ABCF1-201ENST00000326195 SENP3-EIF4A1A0A087X0R7 540 aa13.87□□□□□ -0.19
ABCF1-201ENST00000326195 HDGFP51858 240 aaKnown RBP13.86□□□□□ -0.19
ABCF1-201ENST00000326195 RTL5Q5HYW3 569 aaPredicted RBP13.86□□□□□ -0.19
ABCF1-201ENST00000326195 EFCAB6Q5THR3 1501 aa13.86□□□□□ -0.19
ABCF1-201ENST00000326195 RIMS1Q86UR5 1692 aaKnown RBP13.86□□□□□ -0.19
ABCF1-201ENST00000326195 UNC13BO14795 1591 aa13.86□□□□□ -0.19
ABCF1-201ENST00000326195 C11orf95C9JLR9 678 aaPredicted RBP13.85□□□□□ -0.19
ABCF1-201ENST00000326195 PRAM1Q96QH2 718 aa13.85□□□□□ -0.19
ABCF1-201ENST00000326195 IQGAP3Q86VI3 1631 aa13.84□□□□□ -0.19
ABCF1-201ENST00000326195 PTPRMP28827 1452 aa13.84□□□□□ -0.19
ABCF1-201ENST00000326195 CCDC184Q52MB2 194 aa13.84□□□□□ -0.19
ABCF1-201ENST00000326195 IPO9Q96P70 1041 aaKnown RBP13.84□□□□□ -0.19
ABCF1-201ENST00000326195 RIMS2Q9UQ26 1411 aa13.83□□□□□ -0.19
ABCF1-201ENST00000326195 SRPK2P78362 688 aaKnown RBP13.83□□□□□ -0.2
ABCF1-201ENST00000326195 FAM9BQ8IZU0 186 aa13.83□□□□□ -0.2
ABCF1-201ENST00000326195 CNTLNQ9NXG0 1405 aa13.83□□□□□ -0.2
ABCF1-201ENST00000326195 AGLP35573 1532 aa13.83□□□□□ -0.2
ABCF1-201ENST00000326195 USP47Q96K76 1375 aa13.82□□□□□ -0.2
ABCF1-201ENST00000326195 CLTCL1P53675 1640 aa13.82□□□□□ -0.2
ABCF1-201ENST00000326195 PTPRTO14522 1441 aa13.81□□□□□ -0.2
ABCF1-201ENST00000326195 TET3O43151 1660 aa13.81□□□□□ -0.2
ABCF1-201ENST00000326195 CAMSAP1Q5T5Y3 1602 aa13.81□□□□□ -0.2
ABCF1-201ENST00000326195 CABP2Q9NPB3 220 aa13.81□□□□□ -0.2
ABCF1-201ENST00000326195 ZBTB47Q9UFB7 747 aaPredicted RBP13.81□□□□□ -0.2
ABCF1-201ENST00000326195 AMOTL2Q9Y2J4 779 aa13.81□□□□□ -0.2
ABCF1-201ENST00000326195 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.8□□□□□ -0.2
ABCF1-201ENST00000326195 SPATA31E1Q6ZUB1 1445 aa13.8□□□□□ -0.2
ABCF1-201ENST00000326195 WASHC2AQ641Q2 1341 aa13.8□□□□□ -0.2
ABCF1-201ENST00000326195 SOX12O15370 315 aa13.8□□□□□ -0.2
ABCF1-201ENST00000326195 RNF17Q9BXT8 1623 aaKnown RBP13.79□□□□□ -0.2
ABCF1-201ENST00000326195 EIF5BO60841 1220 aaKnown RBP13.79□□□□□ -0.2
ABCF1-201ENST00000326195 UHRF1BP1Q6BDS2 1440 aa13.79□□□□□ -0.2
ABCF1-201ENST00000326195 TMEM2Q9UHN6 1383 aa13.79□□□□□ -0.2
ABCF1-201ENST00000326195 KCNA6P17658 529 aa13.79□□□□□ -0.2
ABCF1-201ENST00000326195 EIF2AK4Q9P2K8 1649 aaKnown RBP13.79□□□□□ -0.2
ABCF1-201ENST00000326195 TNNT2P45379 298 aaPredicted RBP13.78□□□□□ -0.2
ABCF1-201ENST00000326195 MRS2Q9HD23 443 aa13.78□□□□□ -0.2
ABCF1-201ENST00000326195 BRPF3Q9ULD4 1205 aa13.78□□□□□ -0.2
ABCF1-201ENST00000326195 LMOD2Q6P5Q4 547 aa13.78□□□□□ -0.2
ABCF1-201ENST00000326195 C14orf93Q9H972 538 aaKnown RBP13.78□□□□□ -0.2
ABCF1-201ENST00000326195 PROSER2Q86WR7 435 aaPredicted RBP13.77□□□□□ -0.2
ABCF1-201ENST00000326195 SYNMO15061 1565 aa13.77□□□□□ -0.2
ABCF1-201ENST00000326195 FER1L4A9Z1Z3 1794 aa13.77□□□□□ -0.2
ABCF1-201ENST00000326195 LAS1LQ9Y4W2 734 aaKnown RBP13.77□□□□□ -0.21
ABCF1-201ENST00000326195 ANP32AP39687 249 aaKnown RBP13.76□□□□□ -0.21
ABCF1-201ENST00000326195 METP08581 1390 aa13.76□□□□□ -0.21
ABCF1-201ENST00000326195 ARHGAP31Q2M1Z3 1444 aa13.76□□□□□ -0.21
ABCF1-201ENST00000326195 A2ML1A8K2U0 1454 aa13.76□□□□□ -0.21
ABCF1-201ENST00000326195 VWDEQ8N2E2 1590 aa13.76□□□□□ -0.21
ABCF1-201ENST00000326195 DEPDC5O75140 1603 aa13.76□□□□□ -0.21
ABCF1-201ENST00000326195 TRPM2O94759 1503 aa13.76□□□□□ -0.21
ABCF1-201ENST00000326195 XPCQ01831 940 aaPredicted RBP13.75□□□□□ -0.21
ABCF1-201ENST00000326195 PRAG1Q86YV5 1406 aa13.75□□□□□ -0.21
ABCF1-201ENST00000326195 PMFBP1Q8TBY8 1022 aa13.75□□□□□ -0.21
ABCF1-201ENST00000326195 RPGRIP1LQ68CZ1 1315 aa13.74□□□□□ -0.21
ABCF1-201ENST00000326195 BCORL1Q5H9F3 1711 aa13.74□□□□□ -0.21
ABCF1-201ENST00000326195 SPHKAPQ2M3C7 1700 aa13.74□□□□□ -0.21
ABCF1-201ENST00000326195 CENPJQ9HC77 1338 aaPredicted RBP13.73□□□□□ -0.21
ABCF1-201ENST00000326195 NEFMP07197 916 aa13.73□□□□□ -0.21
ABCF1-201ENST00000326195 CC2D1BQ5T0F9 858 aaKnown RBP13.73□□□□□ -0.21
ABCF1-201ENST00000326195 ZNF335Q9H4Z2 1342 aaPredicted RBP13.73□□□□□ -0.21
ABCF1-201ENST00000326195 ZBTB7CA1YPR0 619 aa13.73□□□□□ -0.21
ABCF1-201ENST00000326195 PLEKHH1Q9ULM0 1364 aa13.72□□□□□ -0.21
ABCF1-201ENST00000326195 LMTK2Q8IWU2 1503 aa13.72□□□□□ -0.21
ABCF1-201ENST00000326195 SLC12A5Q9H2X9 1139 aa13.72□□□□□ -0.21
ABCF1-201ENST00000326195 PIK3C2BO00750 1634 aa13.72□□□□□ -0.21
ABCF1-201ENST00000326195 PREX1Q8TCU6 1659 aa13.72□□□□□ -0.21
ABCF1-201ENST00000326195 TMF1P82094 1093 aa13.71□□□□□ -0.21
ABCF1-201ENST00000326195 NUTM2GQ5VZR2 741 aa13.71□□□□□ -0.21
ABCF1-201ENST00000326195 NPM2Q86SE8 214 aaKnown RBP13.71□□□□□ -0.22
ABCF1-201ENST00000326195 C3P01024 1663 aa13.71□□□□□ -0.22
ABCF1-201ENST00000326195 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms