RNA–Protein interactions for RNA: ENST00000324932.11

NUP98-201, Transcript of nucleoporin 98, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP98, Length 6,973 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-201ENST00000324932 AMPHP49418 695 aa17.78■□□□□ 0.44
NUP98-201ENST00000324932 CPLX1O14810 134 aa17.78■□□□□ 0.44
NUP98-201ENST00000324932 RNF20Q5VTR2 975 aa17.78■□□□□ 0.44
NUP98-201ENST00000324932 EIF4G1Q04637 1599 aaKnown RBP17.77■□□□□ 0.44
NUP98-201ENST00000324932 R3HCC1Q9Y3T6 440 aaKnown RBP17.77■□□□□ 0.44
NUP98-201ENST00000324932 CCDC73Q6ZRK6 1079 aa17.77■□□□□ 0.43
NUP98-201ENST00000324932 ANO2Q9NQ90 1003 aa17.76■□□□□ 0.43
NUP98-201ENST00000324932 RB1CC1Q8TDY2 1594 aa17.76■□□□□ 0.43
NUP98-201ENST00000324932 API5Q9BZZ5 524 aaKnown RBP17.76■□□□□ 0.43
NUP98-201ENST00000324932 SMC3Q9UQE7 1217 aa17.76■□□□□ 0.43
NUP98-201ENST00000324932 PANK3Q9H999 370 aa17.76■□□□□ 0.43
NUP98-201ENST00000324932 AAMPQ13685 434 aa17.75■□□□□ 0.43
NUP98-201ENST00000324932 EFCAB2Q5VUJ9 269 aa17.75■□□□□ 0.43
NUP98-201ENST00000324932 NASPP49321 788 aaPredicted RBP17.75■□□□□ 0.43
NUP98-201ENST00000324932 INTS3Q68E01 1043 aaKnown RBP17.75■□□□□ 0.43
NUP98-201ENST00000324932 ERCC4Q92889 916 aaPredicted RBP17.75■□□□□ 0.43
NUP98-201ENST00000324932 ELL2O00472 640 aaPredicted RBP17.74■□□□□ 0.43
NUP98-201ENST00000324932 VPS37CA5D8V6 355 aaPredicted RBP17.74■□□□□ 0.43
NUP98-201ENST00000324932 DZIP1LQ8IYY4 767 aaKnown RBP17.74■□□□□ 0.43
NUP98-201ENST00000324932 G3V3G9 751 aa17.74■□□□□ 0.43
NUP98-201ENST00000324932 DCAF8Q5TAQ9 597 aa17.74■□□□□ 0.43
NUP98-201ENST00000324932 DCTN1Q14203 1278 aa17.73■□□□□ 0.43
NUP98-201ENST00000324932 ST20-MTHFSA0A0A6YYL1 179 aa17.73■□□□□ 0.43
NUP98-201ENST00000324932 CCDC191Q8NCU4 936 aa17.73■□□□□ 0.43
NUP98-201ENST00000324932 C22orf23Q9BZE7 217 aa17.73■□□□□ 0.43
NUP98-201ENST00000324932 HMGN5P82970 282 aaKnown RBP17.72■□□□□ 0.43
NUP98-201ENST00000324932 NGDNQ8NEJ9 315 aaKnown RBP17.72■□□□□ 0.43
NUP98-201ENST00000324932 ROCK1Q13464 1354 aa17.72■□□□□ 0.43
NUP98-201ENST00000324932 H0YHG0 523 aa17.71■□□□□ 0.43
NUP98-201ENST00000324932 NAT10Q9H0A0 1025 aaKnown RBP17.71■□□□□ 0.43
NUP98-201ENST00000324932 GTF2E1P29083 439 aaPredicted RBP17.71■□□□□ 0.43
NUP98-201ENST00000324932 IFIT2P09913 472 aaKnown RBP17.7■□□□□ 0.42
NUP98-201ENST00000324932 RSPH4AQ5TD94 716 aa17.7■□□□□ 0.42
NUP98-201ENST00000324932 NEXNQ0ZGT2 675 aa17.7■□□□□ 0.42
NUP98-201ENST00000324932 TRDNQ13061 729 aa17.69■□□□□ 0.42
NUP98-201ENST00000324932 CARMIL2Q6F5E8 1435 aa17.69■□□□□ 0.42
NUP98-201ENST00000324932 APAF1O14727 1248 aa17.69■□□□□ 0.42
NUP98-201ENST00000324932 MBD3O95983 291 aa17.69■□□□□ 0.42
NUP98-201ENST00000324932 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.69■□□□□ 0.42
NUP98-201ENST00000324932 LETM1O95202 739 aaPredicted RBP17.68■□□□□ 0.42
NUP98-201ENST00000324932 RDXP35241 583 aaKnown RBP17.68■□□□□ 0.42
NUP98-201ENST00000324932 AMOTL1Q8IY63 956 aa17.67■□□□□ 0.42
NUP98-201ENST00000324932 KIF3BO15066 747 aa17.67■□□□□ 0.42
NUP98-201ENST00000324932 CCDC9Q9Y3X0 531 aaKnown RBP17.66■□□□□ 0.42
NUP98-201ENST00000324932 DHX57Q6P158 1386 aaKnown RBP17.66■□□□□ 0.42
NUP98-201ENST00000324932 SAFBQ15424 915 aaKnown RBP eCLIP17.66■□□□□ 0.42
NUP98-201ENST00000324932 PKNOX2Q96KN3 472 aa17.66■□□□□ 0.42
NUP98-201ENST00000324932 CCDC173Q0VFZ6 552 aa17.66■□□□□ 0.42
NUP98-201ENST00000324932 HSP90AB4PQ58FF6 505 aa17.66■□□□□ 0.42
NUP98-201ENST00000324932 C9orf78Q9NZ63 289 aaPredicted RBP17.66■□□□□ 0.42
NUP98-201ENST00000324932 LTV1Q96GA3 475 aaPredicted RBP17.66■□□□□ 0.42
NUP98-201ENST00000324932 NAP1L1P55209 391 aaKnown RBP17.66■□□□□ 0.42
NUP98-201ENST00000324932 TRAK2O60296 914 aa17.65■□□□□ 0.42
NUP98-201ENST00000324932 CCP110O43303 1012 aa17.65■□□□□ 0.42
NUP98-201ENST00000324932 WWC1Q8IX03 1113 aa17.65■□□□□ 0.42
NUP98-201ENST00000324932 OLFM4Q6UX06 510 aa17.65■□□□□ 0.42
NUP98-201ENST00000324932 CDC45O75419 566 aa17.64■□□□□ 0.41
NUP98-201ENST00000324932 TEFQ10587 303 aa17.64■□□□□ 0.41
NUP98-201ENST00000324932 COG3Q96JB2 828 aa17.63■□□□□ 0.41
NUP98-201ENST00000324932 TRAK1Q9UPV9 953 aa17.63■□□□□ 0.41
NUP98-201ENST00000324932 TCEAL9Q9UHQ7 104 aa17.63■□□□□ 0.41
NUP98-201ENST00000324932 ERC2O15083 957 aa17.63■□□□□ 0.41
NUP98-201ENST00000324932 APPP05067 770 aa17.63■□□□□ 0.41
NUP98-201ENST00000324932 ANO8Q9HCE9 1232 aaPredicted RBP17.63■□□□□ 0.41
NUP98-201ENST00000324932 NOL10Q9BSC4 688 aaKnown RBP17.63■□□□□ 0.41
NUP98-201ENST00000324932 C1orf141Q5JVX7 400 aa17.62■□□□□ 0.41
NUP98-201ENST00000324932 RNF214Q8ND24 703 aa17.62■□□□□ 0.41
NUP98-201ENST00000324932 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.62■□□□□ 0.41
NUP98-201ENST00000324932 G3BP1Q13283 466 aaKnown RBP eCLIP17.62■□□□□ 0.412e-6■■■□□ 15
NUP98-201ENST00000324932 LEKR1Q6ZMV7 388 aa17.62■□□□□ 0.41
NUP98-201ENST00000324932 SDF4Q9BRK5 362 aa17.62■□□□□ 0.41
NUP98-201ENST00000324932 CAGE1Q8TC20 777 aa17.61■□□□□ 0.41
NUP98-201ENST00000324932 TRIM5Q9C035 493 aa17.61■□□□□ 0.41
NUP98-201ENST00000324932 NFXL1Q6ZNB6 911 aa17.61■□□□□ 0.41
NUP98-201ENST00000324932 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.61■□□□□ 0.41
NUP98-201ENST00000324932 CCDC144AA2RUR9 1427 aa17.61■□□□□ 0.41
NUP98-201ENST00000324932 USP47Q96K76 1375 aa17.61■□□□□ 0.41
NUP98-201ENST00000324932 MYO6Q9UM54 1294 aa17.61■□□□□ 0.41
NUP98-201ENST00000324932 ERICH2A1L162 156 aa17.61■□□□□ 0.41
NUP98-201ENST00000324932 FBXW7Q969H0 707 aa17.61■□□□□ 0.41
NUP98-201ENST00000324932 CT47A1Q5JQC4 288 aaPredicted RBP17.61■□□□□ 0.41
NUP98-201ENST00000324932 LNPKQ9C0E8 428 aa17.61■□□□□ 0.41
NUP98-201ENST00000324932 EID1Q9Y6B2 187 aa17.61■□□□□ 0.41
NUP98-201ENST00000324932 DHX8Q14562 1220 aaKnown RBP17.6■□□□□ 0.41
NUP98-201ENST00000324932 BAZ1AQ9NRL2 1556 aaPredicted RBP17.6■□□□□ 0.41
NUP98-201ENST00000324932 EVC2Q86UK5 1308 aa17.6■□□□□ 0.41
NUP98-201ENST00000324932 UACAQ9BZF9 1416 aa17.6■□□□□ 0.41
NUP98-201ENST00000324932 TSPY26PQ9H489 355 aa17.6■□□□□ 0.41
NUP98-201ENST00000324932 OFD1O75665 1012 aa17.59■□□□□ 0.41
NUP98-201ENST00000324932 PDILTQ8N807 584 aa17.59■□□□□ 0.41
NUP98-201ENST00000324932 DDX58O95786 925 aaKnown RBP17.59■□□□□ 0.41
NUP98-201ENST00000324932 DIAPH1O60610 1272 aaKnown RBP17.58■□□□□ 0.41
NUP98-201ENST00000324932 CAVIN1Q6NZI2 390 aaKnown RBP17.58■□□□□ 0.41
NUP98-201ENST00000324932 TSPYL1Q9H0U9 437 aa17.58■□□□□ 0.4
NUP98-201ENST00000324932 BRPF3Q9ULD4 1205 aa17.58■□□□□ 0.4
NUP98-201ENST00000324932 MCM2P49736 904 aa17.57■□□□□ 0.4
NUP98-201ENST00000324932 DHX16O60231 1041 aaKnown RBP17.57■□□□□ 0.4
NUP98-201ENST00000324932 RIPK4P57078 832 aa17.57■□□□□ 0.4
NUP98-201ENST00000324932 RUNDC1Q96C34 613 aa17.57■□□□□ 0.4
NUP98-201ENST00000324932 ERCC6Q03468 1493 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms