RNA–Protein interactions for RNA: ENST00000324394.7

ZNF404-201, Transcript of zinc finger protein 404, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF404, Length 1,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF404-201ENST00000324394 COL9A1P20849 921 aa8.42□□□□□ -1.06
ZNF404-201ENST00000324394 MRPL50Q8N5N7 158 aaKnown RBP8.42□□□□□ -1.06
ZNF404-201ENST00000324394 RBM27Q9P2N5 1060 aaKnown RBP8.42□□□□□ -1.06
ZNF404-201ENST00000324394 SSTR3P32745 418 aaPredicted RBP8.41□□□□□ -1.06
ZNF404-201ENST00000324394 BCL2L12Q9HB09 334 aa8.4□□□□□ -1.06
ZNF404-201ENST00000324394 FAM198AQ9UFP1 575 aa8.4□□□□□ -1.06
ZNF404-201ENST00000324394 GOPCQ9HD26 462 aa8.38□□□□□ -1.07
ZNF404-201ENST00000324394 FAM217BQ9NTX9 383 aaPredicted RBP8.38□□□□□ -1.07
ZNF404-201ENST00000324394 TRAF7Q6Q0C0 670 aa8.38□□□□□ -1.07
ZNF404-201ENST00000324394 NBPF3Q9H094 633 aa8.38□□□□□ -1.07
ZNF404-201ENST00000324394 BEGAINQ9BUH8 593 aa8.37□□□□□ -1.07
ZNF404-201ENST00000324394 TSKSQ9UJT2 592 aa8.37□□□□□ -1.07
ZNF404-201ENST00000324394 PTPREP23469 700 aa8.36□□□□□ -1.07
ZNF404-201ENST00000324394 RBM46Q8TBY0 533 aaKnown RBP8.36□□□□□ -1.07
ZNF404-201ENST00000324394 C3orf80F5H4A9 247 aa8.36□□□□□ -1.07
ZNF404-201ENST00000324394 ZBED2Q9BTP6 218 aa8.36□□□□□ -1.07
ZNF404-201ENST00000324394 PPP1R3GB7ZBB8 358 aa8.35□□□□□ -1.07
ZNF404-201ENST00000324394 EYA1Q99502 592 aa8.34□□□□□ -1.07
ZNF404-201ENST00000324394 LCE2BO14633 110 aa8.33□□□□□ -1.08
ZNF404-201ENST00000324394 SH3D19Q5HYK7 790 aa8.33□□□□□ -1.08
ZNF404-201ENST00000324394 RCCD1A6NED2 376 aa8.33□□□□□ -1.08
ZNF404-201ENST00000324394 NUDT18Q6ZVK8 323 aa8.33□□□□□ -1.08
ZNF404-201ENST00000324394 PCMTD1Q96MG8 357 aaPredicted RBP8.33□□□□□ -1.08
ZNF404-201ENST00000324394 SUPT5HO00267 1087 aaKnown RBP8.32□□□□□ -1.08
ZNF404-201ENST00000324394 TRIM6-TRIM34B2RNG4 842 aa8.31□□□□□ -1.08
ZNF404-201ENST00000324394 PROX2Q3B8N5 592 aa8.31□□□□□ -1.08
ZNF404-201ENST00000324394 GFRA3O60609 400 aa8.31□□□□□ -1.08
ZNF404-201ENST00000324394 NYAP1Q6ZVC0 841 aa8.31□□□□□ -1.08
ZNF404-201ENST00000324394 ANKK1Q8NFD2 765 aa8.31□□□□□ -1.08
ZNF404-201ENST00000324394 RSPH6AQ9H0K4 717 aa8.31□□□□□ -1.08
ZNF404-201ENST00000324394 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.3□□□□□ -1.08
ZNF404-201ENST00000324394 SKIV2LQ15477 1246 aaKnown RBP8.3□□□□□ -1.08
ZNF404-201ENST00000324394 TATDN2Q93075 761 aa8.3□□□□□ -1.08
ZNF404-201ENST00000324394 POLR3EQ9NVU0 708 aa8.3□□□□□ -1.08
ZNF404-201ENST00000324394 PNMA3Q9UL41 463 aa8.3□□□□□ -1.08
ZNF404-201ENST00000324394 SMAPO00193 183 aa8.29□□□□□ -1.08
ZNF404-201ENST00000324394 KCNC4Q03721 635 aa8.29□□□□□ -1.08
ZNF404-201ENST00000324394 PROCA1Q8NCQ7 364 aaPredicted RBP8.29□□□□□ -1.08
ZNF404-201ENST00000324394 MYSM1Q5VVJ2 828 aa8.29□□□□□ -1.08
ZNF404-201ENST00000324394 PACS2Q86VP3 889 aa8.29□□□□□ -1.08
ZNF404-201ENST00000324394 ZMYND15Q9H091 742 aa8.29□□□□□ -1.08
ZNF404-201ENST00000324394 NBPF26B4DH59 902 aa8.28□□□□□ -1.08
ZNF404-201ENST00000324394 ONECUT3O60422 494 aaPredicted RBP8.27□□□□□ -1.09
ZNF404-201ENST00000324394 TBC1D2Q9BYX2 928 aa8.27□□□□□ -1.09
ZNF404-201ENST00000324394 DNAJB2P25686 324 aa8.26□□□□□ -1.09
ZNF404-201ENST00000324394 ATP1B4Q9UN42 357 aaPredicted RBP8.26□□□□□ -1.09
ZNF404-201ENST00000324394 CD46P15529 392 aa8.26□□□□□ -1.09
ZNF404-201ENST00000324394 TMEM134Q9H6X4 195 aa8.26□□□□□ -1.09
ZNF404-201ENST00000324394 DDX11L8A8MPP1 907 aa8.25□□□□□ -1.09
ZNF404-201ENST00000324394 KIAA1468Q9P260 1216 aa8.25□□□□□ -1.09
ZNF404-201ENST00000324394 NRG2O14511 850 aaPredicted RBP8.24□□□□□ -1.09
ZNF404-201ENST00000324394 FLIIQ13045 1269 aa8.24□□□□□ -1.09
ZNF404-201ENST00000324394 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.24□□□□□ -1.09
ZNF404-201ENST00000324394 SPIRE2Q8WWL2 714 aa8.24□□□□□ -1.09
ZNF404-201ENST00000324394 CLK2P49760 499 aaKnown RBP8.23□□□□□ -1.09
ZNF404-201ENST00000324394 SULF1Q8IWU6 871 aa8.23□□□□□ -1.09
ZNF404-201ENST00000324394 RABGEF1Q9UJ41 708 aa8.23□□□□□ -1.09
ZNF404-201ENST00000324394 SOWAHBA6NEL2 793 aa8.22□□□□□ -1.09
ZNF404-201ENST00000324394 FBXO31Q5XUX0 539 aaPredicted RBP8.22□□□□□ -1.09
ZNF404-201ENST00000324394 ZNF787Q6DD87 383 aa8.22□□□□□ -1.09
ZNF404-201ENST00000324394 LIMD1Q9UGP4 676 aa8.22□□□□□ -1.09
ZNF404-201ENST00000324394 BCAMP50895 628 aa8.22□□□□□ -1.09
ZNF404-201ENST00000324394 DIXDC1Q155Q3 683 aa8.22□□□□□ -1.09
ZNF404-201ENST00000324394 LAPTM4BQ86VI4 370 aa8.22□□□□□ -1.09
ZNF404-201ENST00000324394 SEPT9Q9UHD8 586 aaPredicted RBP8.2□□□□□ -1.1
ZNF404-201ENST00000324394 MCM6Q14566 821 aa8.19□□□□□ -1.1
ZNF404-201ENST00000324394 RIC3Q7Z5B4 369 aa8.19□□□□□ -1.1
ZNF404-201ENST00000324394 NUTM1Q86Y26 1132 aa8.19□□□□□ -1.1
ZNF404-201ENST00000324394 RDH13Q8NBN7 331 aa8.19□□□□□ -1.1
ZNF404-201ENST00000324394 MOXD2PA6NHM9 499 aa8.18□□□□□ -1.1
ZNF404-201ENST00000324394 NDUFV2P19404 249 aa8.17□□□□□ -1.1
ZNF404-201ENST00000324394 SWT1Q5T5J6 900 aaKnown RBP8.17□□□□□ -1.1
ZNF404-201ENST00000324394 CLUAP1Q96AJ1 413 aa8.17□□□□□ -1.1
ZNF404-201ENST00000324394 ZNF775Q96BV0 537 aaPredicted RBP8.17□□□□□ -1.1
ZNF404-201ENST00000324394 SLC10A3P09131 477 aa8.17□□□□□ -1.1
ZNF404-201ENST00000324394 RFC5P40937 340 aa8.17□□□□□ -1.1
ZNF404-201ENST00000324394 RSBN1LQ6PCB5 846 aaPredicted RBP8.17□□□□□ -1.1
ZNF404-201ENST00000324394 WBP1LQ9NX94 342 aa8.17□□□□□ -1.1
ZNF404-201ENST00000324394 SPTLC1O15269 473 aa8.16□□□□□ -1.1
ZNF404-201ENST00000324394 CSPP1Q1MSJ5 1256 aa8.16□□□□□ -1.1
ZNF404-201ENST00000324394 ARXQ96QS3 562 aa8.16□□□□□ -1.1
ZNF404-201ENST00000324394 PCDHB15Q9Y5E8 787 aa8.15□□□□□ -1.1
ZNF404-201ENST00000324394 KDM4AO75164 1064 aa8.15□□□□□ -1.11
ZNF404-201ENST00000324394 UBTFP17480 764 aaKnown RBP8.15□□□□□ -1.11
ZNF404-201ENST00000324394 GCGRP47871 477 aa8.15□□□□□ -1.11
ZNF404-201ENST00000324394 QPCTQ16769 361 aa8.15□□□□□ -1.11
ZNF404-201ENST00000324394 PPP2R2DQ66LE6 453 aa8.15□□□□□ -1.11
ZNF404-201ENST00000324394 ZFRQ96KR1 1074 aaKnown RBP8.15□□□□□ -1.11
ZNF404-201ENST00000324394 PRKD2Q9BZL6 878 aa8.14□□□□□ -1.11
ZNF404-201ENST00000324394 ARID3CA6NKF2 412 aa8.13□□□□□ -1.11
ZNF404-201ENST00000324394 FAM98CQ17RN3 349 aaKnown RBP8.13□□□□□ -1.11
ZNF404-201ENST00000324394 TUSC1Q2TAM9 212 aa8.13□□□□□ -1.11
ZNF404-201ENST00000324394 C1orf115Q9H7X2 142 aa8.13□□□□□ -1.11
ZNF404-201ENST00000324394 V9GY48 417 aaPredicted RBP8.13□□□□□ -1.11
ZNF404-201ENST00000324394 RSPH4AQ5TD94 716 aa8.13□□□□□ -1.11
ZNF404-201ENST00000324394 POM121Q96HA1 1249 aa8.13□□□□□ -1.11
ZNF404-201ENST00000324394 SNRKQ9NRH2 765 aa8.13□□□□□ -1.11
ZNF404-201ENST00000324394 A6NJR5 290 aa8.12□□□□□ -1.11
ZNF404-201ENST00000324394 SAMD7Q7Z3H4 446 aa8.12□□□□□ -1.11
ZNF404-201ENST00000324394 SPDYE5A6NIY4 337 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms