RNA–Protein interactions for RNA: ENST00000323441.10

HIF1A-201, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,555 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-201ENST00000323441 TMEM2Q9UHN6 1383 aa5.21□□□□□ -1.58
HIF1A-201ENST00000323441 GLI3P10071 1580 aa5.21□□□□□ -1.58
HIF1A-201ENST00000323441 SLAIN2Q9P270 581 aa5.2□□□□□ -1.58
HIF1A-201ENST00000323441 AFF2P51816 1311 aa5.2□□□□□ -1.58
HIF1A-201ENST00000323441 ZFYVE9O95405 1425 aa5.2□□□□□ -1.58
HIF1A-201ENST00000323441 BLMP54132 1417 aaPredicted RBP5.2□□□□□ -1.58
HIF1A-201ENST00000323441 MSH6P52701 1360 aa5.2□□□□□ -1.58
HIF1A-201ENST00000323441 CCDC141Q6ZP82 1450 aa5.19□□□□□ -1.58
HIF1A-201ENST00000323441 RBM33Q96EV2 1170 aaKnown RBP5.19□□□□□ -1.58
HIF1A-201ENST00000323441 PTCH1Q13635 1447 aa5.19□□□□□ -1.58
HIF1A-201ENST00000323441 GGT6Q6P531 493 aa5.19□□□□□ -1.58
HIF1A-201ENST00000323441 PNPLA6Q8IY17 1366 aa5.19□□□□□ -1.58
HIF1A-201ENST00000323441 TMEM131LA2VDJ0 1609 aa5.19□□□□□ -1.58
HIF1A-201ENST00000323441 CROCC2H7BZ55 1655 aa5.19□□□□□ -1.58
HIF1A-201ENST00000323441 NALCNQ8IZF0 1738 aa5.19□□□□□ -1.58
HIF1A-201ENST00000323441 GCC2Q8IWJ2 1684 aa5.18□□□□□ -1.58
HIF1A-201ENST00000323441 NRXN3Q9Y4C0 1643 aa5.18□□□□□ -1.58
HIF1A-201ENST00000323441 EHBP1L1Q8N3D4 1523 aa5.18□□□□□ -1.58
HIF1A-201ENST00000323441 DISP2A7MBM2 1401 aa5.18□□□□□ -1.58
HIF1A-201ENST00000323441 CSRNP3Q8WYN3 585 aa5.18□□□□□ -1.58
HIF1A-201ENST00000323441 NWD2Q9ULI1 1742 aa5.18□□□□□ -1.58
HIF1A-201ENST00000323441 NUP188Q5SRE5 1749 aa5.17□□□□□ -1.58
HIF1A-201ENST00000323441 HNRNPMP52272 730 aaKnown RBP eCLIP5.17□□□□□ -1.588e-8■□□□□ 11.2
HIF1A-201ENST00000323441 MST1RQ04912 1400 aa5.17□□□□□ -1.58
HIF1A-201ENST00000323441 TRPM2O94759 1503 aa5.17□□□□□ -1.58
HIF1A-201ENST00000323441 RALGAPBQ86X10 1494 aa5.17□□□□□ -1.58
HIF1A-201ENST00000323441 NOS1P29475 1434 aa5.17□□□□□ -1.58
HIF1A-201ENST00000323441 PIK3R4Q99570 1358 aa5.17□□□□□ -1.58
HIF1A-201ENST00000323441 FNBP4Q8N3X1 1017 aaPredicted RBP5.16□□□□□ -1.58
HIF1A-201ENST00000323441 PLEKHG1Q9ULL1 1385 aa5.16□□□□□ -1.58
HIF1A-201ENST00000323441 MYOM2P54296 1465 aa5.16□□□□□ -1.58
HIF1A-201ENST00000323441 RGPD3A6NKT7 1758 aaPredicted RBP5.16□□□□□ -1.58
HIF1A-201ENST00000323441 RGPD4Q7Z3J3 1758 aa5.16□□□□□ -1.58
HIF1A-201ENST00000323441 CFAP65Q6ZU64 1925 aaKnown RBP5.16□□□□□ -1.58
HIF1A-201ENST00000323441 IQGAP3Q86VI3 1631 aa5.16□□□□□ -1.58
HIF1A-201ENST00000323441 ABCA3Q99758 1704 aa5.16□□□□□ -1.58
HIF1A-201ENST00000323441 CASZ1Q86V15 1759 aa5.15□□□□□ -1.58
HIF1A-201ENST00000323441 NRAPQ86VF7 1730 aa5.15□□□□□ -1.58
HIF1A-201ENST00000323441 QTRT2Q9H974 415 aaKnown RBP5.15□□□□□ -1.58
HIF1A-201ENST00000323441 CHD4Q14839 1912 aa5.15□□□□□ -1.58
HIF1A-201ENST00000323441 CEP162Q5TB80 1403 aa5.15□□□□□ -1.58
HIF1A-201ENST00000323441 PRAG1Q86YV5 1406 aa5.15□□□□□ -1.58
HIF1A-201ENST00000323441 CAMTA1Q9Y6Y1 1673 aa5.15□□□□□ -1.59
HIF1A-201ENST00000323441 PLCH1Q4KWH8 1693 aa5.15□□□□□ -1.59
HIF1A-201ENST00000323441 ADAMTS13Q76LX8 1427 aa5.15□□□□□ -1.59
HIF1A-201ENST00000323441 MYT1LQ9UL68 1186 aa5.15□□□□□ -1.59
HIF1A-201ENST00000323441 WASHC2CQ9Y4E1 1318 aa5.14□□□□□ -1.59
HIF1A-201ENST00000323441 DUOX2Q9NRD8 1548 aa5.14□□□□□ -1.59
HIF1A-201ENST00000323441 HRCP23327 699 aa5.14□□□□□ -1.59
HIF1A-201ENST00000323441 MEX3CQ5U5Q3 659 aaKnown RBP5.14□□□□□ -1.59
HIF1A-201ENST00000323441 BRINP3Q76B58 766 aa5.14□□□□□ -1.59
HIF1A-201ENST00000323441 TXNDC2Q86VQ3 553 aa5.14□□□□□ -1.59
HIF1A-201ENST00000323441 NGLY1Q96IV0 654 aa5.14□□□□□ -1.59
HIF1A-201ENST00000323441 SLIT2O94813 1529 aa5.13□□□□□ -1.59
HIF1A-201ENST00000323441 THSD7AQ9UPZ6 1657 aa5.13□□□□□ -1.59
HIF1A-201ENST00000323441 PROSER2Q86WR7 435 aaPredicted RBP5.13□□□□□ -1.59
HIF1A-201ENST00000323441 COL24A1Q17RW2 1714 aa5.13□□□□□ -1.59
HIF1A-201ENST00000323441 MTUS2Q5JR59 1369 aa5.13□□□□□ -1.59
HIF1A-201ENST00000323441 PIAS4Q8N2W9 510 aaPredicted RBP5.12□□□□□ -1.59
HIF1A-201ENST00000323441 KIF3BO15066 747 aa5.12□□□□□ -1.59
HIF1A-201ENST00000323441 NEXMIFQ5QGS0 1516 aa5.12□□□□□ -1.59
HIF1A-201ENST00000323441 PTPRUQ92729 1446 aa5.12□□□□□ -1.59
HIF1A-201ENST00000323441 ERBINQ96RT1 1412 aa5.12□□□□□ -1.59
HIF1A-201ENST00000323441 RSPH4AQ5TD94 716 aa5.12□□□□□ -1.59
HIF1A-201ENST00000323441 TRPC5Q9UL62 973 aaPredicted RBP5.11□□□□□ -1.59
HIF1A-201ENST00000323441 RPRD2Q5VT52 1461 aaKnown RBP5.11□□□□□ -1.59
HIF1A-201ENST00000323441 USP32Q8NFA0 1604 aa5.11□□□□□ -1.59
HIF1A-201ENST00000323441 CCNB3Q8WWL7 1395 aa5.11□□□□□ -1.59
HIF1A-201ENST00000323441 NUTM2BA6NNL0 878 aaPredicted RBP5.11□□□□□ -1.59
HIF1A-201ENST00000323441 NUTM2EB1AL46 878 aaPredicted RBP5.11□□□□□ -1.59
HIF1A-201ENST00000323441 ONECUT3O60422 494 aaPredicted RBP5.11□□□□□ -1.59
HIF1A-201ENST00000323441 YY1P25490 414 aa5.11□□□□□ -1.59
HIF1A-201ENST00000323441 NUTM2DQ5VT03 806 aaPredicted RBP5.11□□□□□ -1.59
HIF1A-201ENST00000323441 CADPS2Q86UW7 1296 aa5.11□□□□□ -1.59
HIF1A-201ENST00000323441 NUTM2AQ8IVF1 878 aaPredicted RBP5.11□□□□□ -1.59
HIF1A-201ENST00000323441 EID1Q9Y6B2 187 aa5.11□□□□□ -1.59
HIF1A-201ENST00000323441 C19orf44Q9H6X5 657 aa5.1□□□□□ -1.59
HIF1A-201ENST00000323441 PXDNQ92626 1479 aa5.1□□□□□ -1.59
HIF1A-201ENST00000323441 ADGRB2O60241 1585 aa5.1□□□□□ -1.59
HIF1A-201ENST00000323441 TBX22Q9Y458 520 aa5.1□□□□□ -1.59
HIF1A-201ENST00000323441 CRYBG1Q9Y4K1 1723 aa5.1□□□□□ -1.59
HIF1A-201ENST00000323441 LRRC59Q96AG4 307 aaKnown RBP5.1□□□□□ -1.59
HIF1A-201ENST00000323441 SOS2Q07890 1332 aaPredicted RBP5.1□□□□□ -1.59
HIF1A-201ENST00000323441 NINLQ9Y2I6 1382 aa5.1□□□□□ -1.59
HIF1A-201ENST00000323441 SHANK3Q9BYB0 1731 aa5.09□□□□□ -1.59
HIF1A-201ENST00000323441 ZNF644Q9H582 1327 aaPredicted RBP5.09□□□□□ -1.59
HIF1A-201ENST00000323441 CFDP1Q9UEE9 299 aaPredicted RBP5.09□□□□□ -1.59
HIF1A-201ENST00000323441 ADGRL3Q9HAR2 1447 aa5.09□□□□□ -1.6
HIF1A-201ENST00000323441 C1orf167Q5SNV9 1468 aa5.07□□□□□ -1.6
HIF1A-201ENST00000323441 MYOM1P52179 1685 aa5.07□□□□□ -1.6
HIF1A-201ENST00000323441 C8orf37Q96NL8 207 aa5.07□□□□□ -1.6
HIF1A-201ENST00000323441 USP21Q9UK80 565 aa5.07□□□□□ -1.6
HIF1A-201ENST00000323441 RIMS2Q9UQ26 1411 aa5.07□□□□□ -1.6
HIF1A-201ENST00000323441 GJD4Q96KN9 370 aaPredicted RBP5.06□□□□□ -1.6
HIF1A-201ENST00000323441 CDC42BPGQ6DT37 1551 aa5.06□□□□□ -1.6
HIF1A-201ENST00000323441 SLC34A2O95436 690 aa5.06□□□□□ -1.6
HIF1A-201ENST00000323441 C1QTNF8P60827 252 aa5.06□□□□□ -1.6
HIF1A-201ENST00000323441 SLC26A8Q96RN1 970 aa5.06□□□□□ -1.6
HIF1A-201ENST00000323441 KIF1AQ12756 1690 aa5.06□□□□□ -1.6
HIF1A-201ENST00000323441 PARD3Q8TEW0 1356 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms